Pangasianodon hypophthalmus (striped catfish): 113533256
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Entry
113533256 CDS
T05759
Symbol
ybx1
Name
(RefSeq) nuclease-sensitive element-binding protein 1
KO
K09276
Y-box-binding protein 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113533256 (ybx1)
03019 Messenger RNA biogenesis [BR:
phyp03019
]
113533256 (ybx1)
03041 Spliceosome [BR:
phyp03041
]
113533256 (ybx1)
Transcription factors [BR:
phyp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
113533256 (ybx1)
Messenger RNA biogenesis [BR:
phyp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
113533256 (ybx1)
mRNA cycle factors
Common to processing body (P body) and stress granule
113533256 (ybx1)
Spliceosome [BR:
phyp03041
]
Common components
Common spliceosomal components
General mRNP proteins
113533256 (ybx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSD
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
113533256
NCBI-ProteinID:
XP_026781059
LinkDB
All DBs
Position
Unknown
AA seq
372 aa
AA seq
DB search
MFAQEYPPVSFLIPSSSIGNGSGERKAESPKAVAPTTAGPGYHLAPGENILESHRRLYQQ
ETTMSSEAETQQPPQPAADAESPSSPAAAATAGDKKVIATKVLGTVKWFNVRNGYGFINR
NDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSK
YAADRNRYRRYPRRRGPPRDYQDNYPSDGEGDKREAGDSTGEGDQQQRKPTFPGRRRYPP
YYVRRRYGRRPPYTNAPPRGEMTEGGEGDENQGGQDQGNKPVRQNYYRGYRPRFRPRGPP
RPRPTREGEEDKENQGEGGQNQEPRQRRYRRNFNYRRRRPQTTKPQDGKDSKAADASTDK
SAAPEAEQGGNE
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcgcaggaatatcctccagtatcttttctaattccgtccagttcgatcggcaac
gggagcggagaaaggaaagcagagagcccgaaggcagtagcccccaccaccgccggccca
ggttaccatctagcaccgggagagaacatactagagagccaccgccggctttaccaacaa
gaaaccaccatgagcagcgaggccgaaacacagcagccgccgcagcctgccgccgatgcg
gagagcccatccagcccggcagccgcagctaccgcgggggataagaaggtcatcgcaaca
aaggtcctggggacagtgaagtggttcaacgtaagaaacggctatggtttcatcaacagg
aatgacacaaaagaagacgtctttgtacatcagactgcgataaagaagaataacccaagg
aaataccttcgcagtgtaggggatggagaaactgtggagtttgatgtggttgaaggagaa
aagggtgccgaggcagccaatgtgactgggccaggcggcgtgcctgtgcagggcagcaaa
tatgcggccgacaggaaccggtacagacgctacccacgcaggaggggccccccacgtgac
taccaggacaactacccaagtgatggagagggagacaagagggaggcaggagacagcacc
ggcgaaggtgatcagcagcagcgcaaacccaccttccctggaaggaggcgctaccctcca
tactacgtgagaagacgctatggccgcagacccccctacaccaatgctccacccagggga
gagatgactgagggtggggaaggtgatgagaaccagggtggtcaagaccagggcaataaa
ccagtgaggcagaactactacagaggctaccgaccaaggttcagaccaaggggcccacct
cgaccccggcctacacgggaaggggaagaggacaaggagaaccagggcgagggcggtcag
aatcaggagccccggcagcgccgctaccgccgcaacttcaactaccgccgcagacggcct
cagaccaccaagccccaggacggcaaggacagcaaggcagccgatgcatcaaccgacaaa
tcagccgctcccgaggccgaacagggcgggaacgagtag
DBGET
integrated database retrieval system
