Pangasianodon hypophthalmus (striped catfish): 113533272
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Entry
113533272 CDS
T05759
Name
(RefSeq) protein strawberry notch homolog 2-like isoform X1
KO
K26273
protein strawberry notch
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phyp03036
]
113533272
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
113533272
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Borrelia_P83
Motif
Other DBs
NCBI-GeneID:
113533272
NCBI-ProteinID:
XP_026781106
LinkDB
All DBs
Position
Unknown
AA seq
1623 aa
AA seq
DB search
MPILATSVVMDAEDFLHPEDPQLESPKYSVPSPQLPNAIESQLFSSNPWQFSQPPQYNQY
SYPMQQSGRQFQVNPSSVDEFSSFPDVDFSDLTSGRNDLAPDLSCIDDLSNPSLFSSTPD
SLSEYDPASFGIDTMSHIPSEGSASTPAFWDTPGNSQRQLTRFPEEINAIFNNQPLAGYK
LPEIGQTPPEEEEEADEEETEELGHIDTYAEYKPSKSTIGISHPDIVVETSTLSSVPPPD
ITYTLSIPDNTIRTGLLSALQLEAIIYACQQHEVILQNDQRAGFLIGDGAGVGKGRTVAG
IILENYLKGRKRALWFSVSNDLKYDAERDLKDIDAPNIPVFALNKIKYGDTATSEGVLFA
TYSALIGESQAGGQHRTRLKQILDWCKPGFDGVIVFDECHKAKNATSTKMGKAVLDLQNK
LPRARVVYASATGASEPKNMIYMSRLGIWGEGTPFRTFEDFLHAIEKRGVGAMEIVAMDM
KVSGMYIARQLSFSGVSFRIEEIALDEEFKLVYNKAARLWAEALEVFTRAADMLGLVSRK
SLWGQFWSSHQRFFKYLCIAAKVRRLVELAKAEMNQGKSIVIGLQSTGEARTREVLDEND
GHLDRFVSAAEGVFQSLVQKHFPLEKPKREKTAGNKRKRKPRGRPPKCQKPCVEVGEVIK
ISDGSDSDSEDMDSDSNSSPESLQDNDDVIFVNHINGPTAKLEELKQGLLAKIAELGKEL
PLNTLDELIDQFGGPEKVSEMTGRKGRVVRRPDGRVQYESRAEQGFTIDHVNIKEKLRFM
DGEKLVAIISEAASSGISLQADKRVQNKRRRVHMTLELPWSADRAIQQFGRTHRSNQVTA
PEYIFLISELAGERRFASIVAKRLESLGALTHGDRRATESRDLSKYNFENKYGTKALDKI
TKAILGYIENKVPPPKGYLGGDERFFADMKKGMIDVGIFCKEPRFGLNTEKDCTITKFLN
RILGLEVHQQNFLFQYFTNNFEYLIDKDKKEGKYDMGILDLAPGNDEIHEEKQEVFLTPG
NPQEGQVTLYKISVDRGMPWVEACSKANTLTGEYEGFYLSHKLRGSQPCVLLAEQGRGHN
LIVYKPNIGRQAHPENLENLLQRYRKVTQDQAKDCWENQFVFSFQKCSHANWKGKCKQVE
QGQECWLGMRLRQYHMLCGALLRVWKRVADVVSDITNSSILQIVRLKTKQNSKQVGIKIP
ENCVERVRSELSQMDSDVKRARQQKEQRAQEQRAQEQRAQEQRAQEQRAQEQRIRQEFLR
LEQQKLYSRKAFSHAAMHLPSPPPYPGSRPGRAALPTSQAVDEVLDLTLSPCSSPEPKPT
HANGALGLNGVVGMNGVFGMRRGAGEGGLKIPETFHLEDLISQERQREHNIAQTIHTQTQ
HTALSVLQQNPGHLLTPQQNPGQFNAQLLRHNGSKPDINTLTNYSIHAQQFQQHVNSISQ
PPRLLQPSPIQQDGHQHSLMHTHTHSLHTHLRENQMPVSEPAPLSLKLGQQSQQGSLSSQ
SVTENSASPQDDFSFNLDLLGHPPYSLTHQAPPSPSFSCSSPGTSSLFSSDPQSSSLSDS
ISPSSLFAPSSERLPLPLPNGHSSMDAQDAHDAHKALDRMACGGSADRRHSVIQFNSLDW
DTT
NT seq
4872 nt
NT seq
+upstream
nt +downstream
nt
atgcccattctcgcaacatctgtcgtcatggacgcggaggacttcctgcacccagaggac
cctcagctggagagccccaaatacagtgtgcccagtcctcaactccccaatgccatcgag
agtcagctgttttcctctaacccgtggcaattttcccagccgcctcagtacaaccagtac
agctatcctatgcaacaatctgggaggcagttccaggtcaacccctcatctgtggatgag
ttcagctcattccctgacgtggatttctctgacctcacatcaggcaggaatgaccttgca
ccagatctgtcatgtatcgatgacctgtccaacccgtctctgttctcctctacccctgac
tctctgtctgaatatgaccctgctagctttggcatcgataccatgtcccacatacccagc
gagggctccgcctcaacaccagcattctgggacacacctggaaacagccagagacagttg
accaggtttccagaagaaatcaatgccatctttaacaaccaaccattagcaggatataag
ctccctgaaattggtcagactccaccagaggaggaagaggaggcagatgaggaagagacg
gaagaactcggtcacatagacacctacgctgaatacaagccatccaaatctactatagga
atttctcatccagacattgtggtagagaccagcactctctccagtgtccctcccccagac
atcacctacacgctctccatcccagacaacactatccggaccggtttgctctctgccctg
cagctcgaagccatcatctatgcctgccagcaacacgaggttatcctgcagaatgaccag
agggcaggttttctgattggagacggagccggtgtggggaagggtcgcactgtagctggc
atcatactggagaactatttaaaaggaagaaagcgagccctgtggttcagtgtttctaat
gatctcaagtacgacgcagaaagagacctcaaggacatagacgccccgaatattcctgtg
tttgctttaaacaagattaagtatggagacacagctacctcagagggcgtcctgtttgcc
acatactcggcgctgattggggagagtcaggcagggggacagcaccgcacccgactcaaa
cagatattggactggtgtaaacctggctttgacggagtcattgtgtttgatgaatgtcat
aaagccaaaaatgcgacatccacgaagatgggcaaagctgtcctggacctgcagaacaag
ctgccccgggccagggtggtgtatgctagtgccacaggtgcctctgagccaaagaacatg
atctatatgagccggttggggatttggggagaggggacacccttcaggacatttgaggac
ttcctacatgccattgagaagaggggtgtcggcgccatggagatagttgccatggatatg
aaagtcagtggcatgtacatagcccggcagctcagcttttctggggtgtcatttcggatc
gaggaaatcgcactggatgaagaatttaagctggtctacaacaaggcagcccgactgtgg
gctgaagcgctggaagtgttcaccagggcagcagatatgctgggactggtctctcgtaag
tccctctggggccagttttggtcctcccaccagcgtttctttaaatacctctgcatcgcc
gccaaagtgcgccgcttggtggagctcgctaaggctgagatgaatcagggcaagagcatt
gtgattgggttgcagtcgaccggtgaggcccgtactcgtgaggttctggatgagaatgat
ggacacctagaccgattcgtctctgcagctgagggtgtgttccagtccctggttcagaag
cactttccattagagaaaccgaagagagaaaagactgctggaaataaacgaaaacgaaaa
ccaagaggtcggccacccaaatgtcaaaaaccctgtgtagaggttggtgaagttattaag
atcagcgatggctcagattcagactctgaggacatggatagtgattcaaactcgtcccct
gagtcactgcaagacaacgatgacgtcatctttgttaaccacatcaatggacctactgca
aaactggaggagttgaagcaggggctgctggctaagatagcagagctgggaaaggagctt
cctcttaacacactggatgagctgattgatcagttcggagggccagagaaagtgtctgag
atgacaggtcgtaagggccgagttgtgcggaggccagatggcagggtgcagtatgaatca
cgtgctgaacaaggattcaccatcgaccatgtgaacatcaaagagaagttacgatttatg
gatggcgaaaagctggtggcgatcatctcagaggctgcaagttcagggatttctctacag
gcagataaacgtgtgcagaataaaaggagaagggtgcacatgacgctggagctgccgtgg
agtgctgaccgtgccatccagcaattcggtcgcactcatcgctctaaccaggtaacagct
ccagagtacatcttcctgatctcagagttagcaggagagagacgctttgcttccatcgtg
gccaagcgcctggagagtttgggggcactgacacatggtgatagacgagccactgagtcc
agagatctgagcaaatacaattttgaaaataaatatggaacaaaagctttggataagatc
actaaagccatcttgggatacattgaaaacaaagttccaccaccaaaaggctatctaggg
ggtgatgaaagattctttgcagatatgaagaaagggatgattgatgtgggcattttctgt
aaggagccacgctttggcctcaacacagaaaaagactgcaccatcactaaattcctgaat
cggattctaggcctggaggtgcaccagcagaactttctcttccagtacttcaccaacaac
tttgaatacctgattgacaaggacaaaaaggaaggcaaatatgacatgggtatacttgat
ctggctccaggtaatgatgagatccatgaagagaaacaggaagtattcctgactcctggg
aacccccaagaaggccaggtcaccctctataagatcagtgtggatcggggaatgccatgg
gtcgaggcctgcagcaaagcaaacacactgactggggaatatgagggcttctacctttcc
cacaagctgcgagggagccagccgtgtgtgttgctggcagagcaaggccgaggtcataac
ctgatagtctataagcctaacatcggcaggcaggcccaccctgagaacctggagaatctg
ctgcagcggtaccgcaaggtgacacaagaccaggccaaagattgctgggagaatcagttc
gtcttctcgttccagaagtgcagccatgctaactggaaaggtaagtgtaagcaggtggag
cagggtcaggagtgctggctgggcatgcgtctgcgacagtaccacatgctgtgtggagct
ttgctgagagtgtggaagcgagtcgcagatgttgtctctgatatcaccaattccagcatc
ctgcagattgtgcgcctcaaaaccaaacagaacagcaagcaagtcggtataaagatacca
gagaactgtgtggagcgtgtgcgcagcgagctctctcagatggactcagatgtgaagcga
gctcggcagcagaaggagcagcgtgcgcaggagcagcgtgcgcaggagcagcgtgcgcag
gagcagcgtgcgcaggaacagcgtgcacaggaacagcgcatccgccaggagtttctcagg
cttgagcagcagaaactctacagccgcaaggccttcagtcacgctgctatgcatctacca
agccccccaccgtacccaggctcacggcctggccgggctgccctgcccacgagccaggct
gtggacgaagtgctggacctcacactcagcccctgctcctcccctgagcccaaaccgact
catgcaaatggagcgctgggcctgaatggagtagtgggtatgaacggtgtctttggcatg
cggagaggagcaggggaaggagggttgaagatccctgagacatttcacctggaagacctg
atctctcaggagcggcagagggagcataacatagcgcaaaccatccacacacagacgcag
cacacggcgttgagcgtgctgcagcaaaacccaggacatttgctcacgccccagcagaac
cccggtcaattcaacgcgcagctgctgagacacaatgggagcaaaccagacattaacacg
ctaaccaactacagcatacatgcgcagcagtttcaacagcatgtaaactccatatcacag
ccacctcgcttgcttcaaccatctcctatacagcaggatggtcatcaacactcactgatg
cacacacacacgcacagtttgcacacacatttacgggaaaaccaaatgccagtcagtgaa
cctgctccgctttcattaaaactgggtcagcagtctcagcaggggtcactcagcagtcag
tctgtcacagaaaattctgcatctccacaggacgacttcagcttcaaccttgacctgctc
ggtcatcctccatactcgttaacccatcaagcccctccctcaccttcattttcttgttcc
tcccctgggacgtcatcgctcttctcttcagacccccagtcttcttcactctctgactcc
atctccccttcttctctgtttgcgccttcgtccgagcgactgcctcttccattacccaac
ggccactccagcatggatgcccaggatgcccacgatgcccacaaggccctcgaccgaatg
gcttgcggaggttctgcagaccgccgccactctgtcattcagttcaattctctagactgg
gacaccacctag
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integrated database retrieval system
