Pangasianodon hypophthalmus (striped catfish): 113533277
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Entry
113533277 CDS
T05759
Symbol
aaas
Name
(RefSeq) aladin
KO
K14320
aladin
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113533277 (aaas)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phyp03019
]
113533277 (aaas)
Messenger RNA biogenesis [BR:
phyp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113533277 (aaas)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
WD40_Prp19
PD40
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_CAF1B_HIR1
eIF2A
SGL
Motif
Other DBs
NCBI-GeneID:
113533277
NCBI-ProteinID:
XP_026781118
LinkDB
All DBs
Position
Unknown
AA seq
510 aa
AA seq
DB search
MCSLTLFPPPLLSGQVTLYEANNELVWGNLTECYEKQHWTPPSLHFPRETLKPHSRPESS
SKAAFLDHRDTLWMRSAGAWRDAGLTGLLDEITNSSEEVPKWLTLSSGCVLALLRWMSSF
HCSLFPHLTLSGEDMVAEFSQVLSWSDSAIRSFAWHPHTDKFAVALLDDSIKIYNSRSAI
TPTLKHRLQRSVSAMQWKPLCASTLAVACHTCLLIWHVDPNSLSTRPSSGCAQVLSHPGH
SPVTSIAWSPSGSLLVSASPVDTSMIVWNVAAEICVPLQRVGGGGVTNLSWSPDGSRLLA
ATPSALFRVWETKMWTCERWPCLKGRCQSGCWSPDGSRLLFCVQGETVIYALTFSDMAGG
PKSAAVVADLSETSFSGPDGDLIVGGEVQSLAWDPTGERLAVLLKGKAESSNHSAIIAVF
KTRSSPIFELLPCGFVKGEAGAEPRLMQFQPHFQHGALLTVCWSNGRISHVPFYFVGVGM
PCSTGSPPLPHFTSKTEDYNTHTLYTEQMS
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgtgctctctcacgctcttcccgccgccgctgctcagcggacaggttactttatatgag
gcaaataacgagctcgtgtgggggaatttgacggagtgctacgagaaacagcactggact
cctcctagccttcattttccaagggaaactctgaaaccacacagtcgcccagagagcagc
agcaaagcagccttcctggatcacagagatactttgtggatgagaagtgctggagcctgg
cgtgacgctggtcttactggtctattagatgaaatcactaacagttctgaagaagtaccc
aagtggctgacgttgagttccggatgtgttttggctcttctgcgatggatgtcttcattt
cattgttctctgtttccacatctgacgttaagtggtgaggatatggtcgctgaattttca
caggtactgagttggtctgatagcgctatccgaagctttgcatggcatcctcacacagac
aagtttgcagtagccctcctggatgactccatcaagatctacaactctcggagtgcaata
actccgactctgaagcatagactgcagaggagtgtgagtgctatgcagtggaagcctctg
tgtgcgtcaacactggccgtggcctgccacacctgtctgctcatttggcacgtggacccg
aactcgctctctacacggccctcttctggttgtgctcaggtattgtctcatcctggtcac
tctccagttacttccattgcttggtccccttctggttctctactagtgtctgcatctcct
gtggacacttccatgatagtatggaatgttgctgcagaaatctgcgttcctctgcagcgt
gtaggaggtggaggagtcacaaatctgtcatggtcgccagatggcagccgactattggca
gccactccatctgctctattcagggtgtgggagacaaagatgtggacctgtgaacggtgg
ccttgtctgaaagggcgctgtcagtcagggtgctggagtcctgatggaagtcgattgttg
ttctgcgttcagggagaaacggtgatctacgcactcactttttcagacatggcaggagga
cccaagtctgctgcagtggtggctgatctctctgagacttccttcagcgggcctgacggt
gacctcatagttggaggagaggttcagtctcttgcctgggatcccactggagagaggctg
gctgtgcttctgaaaggaaaggcagaatcctccaatcattctgccatcattgctgtattt
aaaacacgctccagccccatctttgagttacttccatgtggttttgtgaaaggggaggcc
ggagcagagcctagactgatgcagttccagcctcattttcagcatggtgcactgctcact
gtgtgctggtcaaatgggcgaatctctcatgtgcctttctactttgttggtgtggggatg
ccatgttcaactggaagccctccacttccccacttcaccagcaagacagaagattacaat
acacacaccctctacaccgaacaaatgtcgtga
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