Pangasianodon hypophthalmus (striped catfish): 113533336
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Entry
113533336 CDS
T05759
Symbol
brpf1
Name
(RefSeq) peregrin isoform X1
KO
K11348
bromodomain and PHD finger-containing protein 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phyp03036
]
113533336 (brpf1)
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
MOZ/MORF complex
113533336 (brpf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-HC5HC2H_2
EPL1
zf-HC5HC2H
Bromodomain
PWWP
PHD_2
PHD
PHD_NSD
PHD-1st_NSD
DUF3915
Motif
Other DBs
NCBI-GeneID:
113533336
NCBI-ProteinID:
XP_026781207
LinkDB
All DBs
Position
Unknown
AA seq
1274 aa
AA seq
DB search
MGLDFDVKTFCHNLRATKPPYECPVETCRKVYKSYSGIEYHLYHYDHDNPPSAQGTPQKK
RKGRPARSSLPTSGDGSELGNAHTMPGHGGMPGSPADNSDHSHSPGRDTMTYAQAQRMVE
LEIHGKVHRLSIFEDLDVVSEEDSEADDGLGGSTTCNGENGVSEGGTNGKDRPDTPATAN
GGKGAGATPKAGKHKSKEKKKDGMHHHGNPPGPAVKLPEAVFRELDQDRPDAPPRPTSYY
RYIDKSVEELDEEVEYDIDEEDYIWLDIMNDKRRSDGVTPIPQEVFEYLMDRLEKESYFE
SHNKGEPNALIDEDAVCCICNDGECQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRR
CLQSPSRAVDCALCPNKGGAFKQTDDARWAHVVCALWIPEVCFANTVFLEPIDSIEHIPA
ARWKLTCYICKQRGAGACIQCHKANCYTAFHVTCAQQAGLYMKMEPVRETGANGTSFSVR
KTAYCDVHTPPGTARPLGGGTGSGSSLSEAEDEDEEDGGGVGEERAKRAKAKSRRKLKRA
RKILAEKRAAAPVVSVPCIPPHRLSKITANLTVPRKSQFMQRLHAYWTLKRQSRNGVPLL
RRLQTHLQSQRNVEPVPSITTKDGEEKHTALKEQLKAWQRLRHDLERARLLVELIRKREK
LKREALKIQQLALEMQLTPFLALLRSTLEQLQERDTNNFFTEPVPLNEVPDYLDHIERPM
DFQTMWTSLESHRYLSFDTFESDFLLIVNNCLKYNAKDTVFYRAALRLREAGSGILRQAR
RQAERIGYDFDTGMHLPREPSPESPRERERERERERQREKEREREQDRERERSPSVNEDE
LRRLPLEEQLRVLQARFDDVSSGKHSIGRSRRAKALRKEMTVIKRKLAHQRDGGSSGGNR
ESGASGERGSNLAHHASGTTCHDEGGESSSQEISGKDITATASTLASEVGRRTSILFSKK
NPKATGPPKRPGRPPKRRDAIHNSGAMSSSPVGPPQLPLMTTARQRKRPRSPRSSSSSES
ESDNDHVDLGLPSNGFDGGSKPVTESFLVYRNEPRYPRSSSDSDSTTSSSSSAASDRTST
TPSKQGRGKTSFSRSTFQEDSSEETSGTENDSYSVGGARGVSHLMRGRSRSGCWMGSTDY
TTLDALDLVWAKCRGYPSYPALIIDPKMPREGMFHRGVPIPVPPLEVLKLGEQMTQEARE
HLFLVLFFDNKRTWQWLPRSKLVPLGVDQDLDKEKMLEGRKSNIRKSVQVAYHRAMQHRN
KVQGDPSSDTSDSD
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atggggctggactttgatgtgaaaacattctgccacaacttgcgtgccaccaagccaccg
tacgaatgcccggtcgagacgtgccgcaaggtgtataagagctacagtggtatcgagtac
cacctgtaccactacgaccacgacaacccaccttctgctcaaggaacgccgcagaagaag
cgcaagggtcgcccagctcgttcctcactacccacgtcaggagatggctctgaacttggt
aacgcccacactatgcctgggcacggtggaatgccgggtagcccagcagataactctgac
cactcacattctcctgggagagacacgatgacctacgctcaggctcagcgcatggtggag
ctggagatccatggcaaagtgcaccgcctcagcatctttgaggacctcgatgtggtgtct
gaggaggacagtgaggctgatgatggactaggcgggtccacaacatgcaatggtgagaat
ggggtcagtgaaggtgggaccaatggaaaggacagacctgacacccctgcgacagccaat
gggggtaaaggagcgggggcaacacccaaagcaggcaagcacaagagcaaagaaaagaag
aaggatggcatgcatcatcatggaaatccaccagggccagctgtcaagctacctgaggct
gtgtttcgagagctggaccaagacaggcctgatgcaccaccaagaccgacatcttattac
aggtacatagataaatctgtggaggagctggatgaggaggtagagtatgacatcgatgag
gaagactacatctggctggacattatgaatgataaacggcgtagcgatggagtgacgccg
atccctcaggaggtgtttgaatacctgatggatcggttagaaaaggagtcctactttgag
agccacaacaagggcgagccgaatgcactgatcgacgaggacgctgtgtgctgcatttgc
aatgacggcgagtgccagaacagcaacgttatcctgttctgcgacatgtgtaacctggcc
gtgcaccaggagtgctacggcgttccttacatcccagagggtcagtggctttgccgtcgc
tgcctgcagtcgccctcgcgtgccgtcgactgtgctctatgccctaacaagggcggagcc
ttcaagcagaccgatgatgctcgctgggcacatgttgtgtgtgcattgtggatacctgag
gtatgctttgccaacacagtcttcctggagccaatcgacagcattgagcacatcccggcg
gcacgttggaagctgacatgctacatatgtaagcagcgtggggctggcgcgtgtatccaa
tgtcacaaggccaactgttatacggctttccatgtgacgtgtgcacagcaagccgggctc
tacatgaagatggagcctgtgcgcgagactggtgccaacggcacctcgttcagtgtgcgc
aagacggcttactgtgacgttcacacgccacctggcacggcccgtccgctggggggcgga
accgggagtggctcctctctcagtgaggcagaggacgaagacgaggaggacggtggtgga
gtcggagaggagcgggccaaaagggcaaaggccaaatcaagacggaagctaaagagggca
aggaagatcctagcagagaagagggcggctgcacctgtggtgtctgtgccatgcatacca
ccacacaggctgagcaagatcacggccaatctgacagtacccaggaagagtcagttcatg
cagaggctgcatgcctattggaccctgaagagacagagccgcaacggcgtccctctgctg
cgtcgccttcagacacacctacagtcccagcgcaatgtcgagcctgttccttctataacc
acgaaggatggcgaggagaagcacacagcgctgaaagaacagctgaaagcatggcagaga
ctcaggcatgacctggagagagccagactcctggtggagctcatccgcaagagagagaaa
ctcaagagggaggcgcttaagattcagcagttagccttggaaatgcagctgacgccgttc
ctggcgttgttgaggagtacactggaacagctgcaagagcgagacaccaacaatttcttc
actgagcctgtgccactgaatgaggtccccgactacctggatcacattgagcggcccatg
gatttccagaccatgtggacgagtctggagtctcatcgctatcttagctttgatacgttc
gagtccgacttcctgctcatcgtcaacaactgcctcaaatacaatgccaaggacactgtg
ttctaccgggcagcattgaggctgcgggaggcgggcagtggcatcctgcgccaggctcgg
agacaggccgagcgaattggctatgactttgacacaggcatgcacctgccccgagagccc
agccccgaatccccacgtgagagagagagggagagagaaagagaaaggcagcgggagaag
gagagagagcgagagcaggacagggaaagagagaggtccccttctgttaatgaagatgag
ctgcgtcgtttgccgctggaggagcagttacgggtcttgcaggcacgtttcgatgacgtc
agctcgggaaagcacagcatcgggcgctcacgtcgagccaaagctctgaggaaggagatg
acggtcattaagcgcaaactagcgcatcagcgggatggcgggtccagcgggggcaaccga
gaatcaggggcatctggagagcgtggttctaatcttgcacatcatgcttcaggaaccaca
tgtcatgacgagggaggggagagcagcagccaggagattagcggaaaagatatcaccgct
actgcctctacactggcatctgaagtgggccgccgaacctcaatcctcttctccaaaaag
aacccaaaggccacaggacctccgaagcgtccaggccgcccccctaaaagacgtgacgca
atacacaactctggagcgatgagctccagtcctgtaggacctccacagctccctctgatg
accacagcacgccagcgcaagagaccacgaagccctcgctccagttccagctctgagagt
gagagtgacaatgatcacgtggaccttggtctgcctagcaatggtttcgatggcggcagt
aagcctgtgactgagagtttcctggtatacaggaacgagccacgctatccccgctccagc
tctgactcagattctacaaccagcagcagcagcagtgccgcctctgacagaacaagtacc
actccttcaaagcagggccgtgggaagacttcattctcacgctcaacatttcaggaggat
agcagcgaggaaacctctggaacagagaatgactcctattcagtgggaggagccagaggg
gtttcacacttgatgcgaggccggagtaggtcaggttgctggatgggctcaacggactac
accaccttagatgccctcgatctcgtatgggccaagtgtcgaggatacccctcttatcct
gctctgattatcgatcccaaaatgccacgggagggtatgttccatagaggtgtgccaatc
cctgttccccctctggaagtgctcaagctgggggagcagatgacccaggaagcacgggag
catctgttcctagtgctgttctttgacaacaagaggacttggcaatggttgccgcgctca
aagctcgtaccgctgggtgtggatcaggatctggataaggagaagatgctggaaggcagg
aaatccaacatcaggaaatcggtgcaggtggcgtatcatcgcgccatgcagcaccgtaac
aaagtacagggtgatcccagcagcgacacaagcgacagtgactga
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