Pangasianodon hypophthalmus (striped catfish): 113533410
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Entry
113533410 CDS
T05759
Symbol
rmi1
Name
(RefSeq) recQ-mediated genome instability protein 1
KO
K10990
RecQ-mediated genome instability protein 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
113533410 (rmi1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phyp03400
]
113533410 (rmi1)
DNA repair and recombination proteins [BR:
phyp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
113533410 (rmi1)
FA (Fanconi anemia) pathway
113533410 (rmi1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RMI1_C
RMI1_N_C
RMI1_N_N
Motif
Other DBs
NCBI-GeneID:
113533410
NCBI-ProteinID:
XP_026781354
LinkDB
All DBs
Position
Unknown
AA seq
646 aa
AA seq
DB search
MPVAGGTQATHAWLRSTWHIQVPQTWLDACVEWVTEEAGGAALPQAQLNQQVLDQWLLTD
LRDLAHPVLPAGITEAEKMELNGCYSLQVDSLLDVSQPAYSQLQRVRGSDCSNDEVTAVT
QATQKPWEAKPTRMLMLQLTDGVQTLEGIEYRPIPALSANLPPGTKLQVVGMVMVRLGVL
LLKPENVRVLGGEVEALMGVHSQSRVLCRTLGLPEENHQQEAEDQEVHQGARNEGTLDSG
YESLPSSVTSQMISRNEPRQLENSRLSTLEVTPISRQSGPDVTDIPDEDFDNIPDDFMDY
PEDIGNIPVDSDHGPDDRGNNSDDFNNDPEYFDDIPMEELDDIMSPTEILPSSGPVENGG
TQQEDVSSSDYVRTDSQVNQLQASNHLSLSSKAPLSEANPTEVIEVDSDDDFSSSPEPKI
ARYESRSQVPENNCRKKADTTILNQPRASNPLSLSSSVPLSEANPTEVIEVDADDDSFTS
PEPKMSRYEPRSQVPAQNRSKKVDMSILNYLCILKAGVWPPHSVQVVRLHAFIVTLLGSL
RSSGGEWKVRATISDGTGYLDVDLSDSLLANLIGFSAAESKVLRKDPAKRGMVDAGIQNC
QRELVDMCCVMSVQVDPNGTGTVLRTDPLTDRECCEIQKRVTDRRS
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgccagtggcaggtggtacgcaggccacccacgcctggctgcgctccacgtggcacatc
caggtgccccagacatggctggatgcctgtgttgaatgggtaacagaggaggcaggtggc
gcagccttgcctcaagcccagctcaaccagcaagtcctggaccagtggcttctcacagac
ctccgtgacttagctcatcccgtcctgcctgctggcattactgaggctgagaagatggaa
ctgaatggctgctacagcctccaggtggactcactccttgatgttagccagccggcgtat
tctcagctccagcgtgtccgcggctctgattgctccaatgatgaagtcacggctgtgacg
caagccactcagaaaccatgggaggcaaagccgactcgaatgctgatgctgcagctcact
gatggtgttcagaccctggagggcatagagtaccgacctattccagctctcagtgccaac
ctgcccccaggcaccaaactgcaggtggtgggaatggtgatggtacgtctcggggtgttg
ctgctcaaaccagagaatgtgagggttcttggtggagaagtggaggcgctcatgggggtg
cattctcagagcagggtgctctgcaggaccttagggttgcctgaggaaaaccatcagcaa
gaagcagaagatcaagaggtccatcaaggagcaagaaatgagggaaccctggacagcgga
tatgagagccttccaagcagcgtgacctcgcaaatgatcagcagaaatgagcctcgtcag
ttagagaactctagattaagcacccttgaagtgacgcccatttctagacagagtgggcca
gatgtaaccgatattccagatgaggactttgataacattccagatgacttcatggattat
ccagaggacattggcaacattccagtagactctgaccatgggccagacgacaggggcaac
aattcagatgacttcaataatgatccagaatactttgatgacattccaatggaggaattg
gatgacatcatgtcacctactgaaatcttacccagcagtggacctgtggaaaatggagga
acacaacaagaggatgtttcaagttcagactacgtacgaacagatagtcaagtgaaccaa
ctccaagcttcaaatcatcttagtttatcctccaaagctcccctcagtgaggcaaatcca
actgaagttattgaagttgattcagatgatgacttctcctcttctccagaaccaaagata
gccagatatgagtccagatcacaggttcctgaaaacaattgcaggaaaaaagctgacaca
acaattctcaaccaaccccgagcatcaaatccccttagtttatcctccagtgttcccctg
agtgaggcaaatccaactgaagttattgaagttgatgcagatgatgactccttcacttcc
ccagaaccgaagatgtccagatatgaaccaagatcacaggttcctgcacaaaaccgcagc
aaaaaagttgacatgtcaatcctcaactacctttgtattttgaaggctggtgtttggcca
ccccatagtgttcaagtagtgcggctgcatgcctttatagtcactctgctggggagcctt
cgcagcagtggaggggaatggaaagtcagggccaccatatcagacgggactggatacctg
gatgtggatctatcagacagtttgctggcaaatctgattggcttctcagcagcagagtct
aaagttctaaggaaggatccagcaaagcgtggtatggtggacgctgggatacagaactgt
cagagggagctggtggatatgtgctgtgtgatgagtgtgcaggtagatccaaatgggaca
ggtacagtgctgagaactgacccactgacggacagagagtgctgtgaaatacaaaagagg
gtgacagacaggaggtcctaa
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