Pangasianodon hypophthalmus (striped catfish): 113533496
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Entry
113533496 CDS
T05759
Name
(RefSeq) CUGBP Elav-like family member 5
KO
K13207
CUG-BP- and ETR3-like factor
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phyp03041
]
113533496
Spliceosome [BR:
phyp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
113533496
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
113533496
NCBI-ProteinID:
XP_026781467
LinkDB
All DBs
Position
Unknown
AA seq
523 aa
AA seq
DB search
MARFTQSEARRHQQQQQQQTPPQPAHASALLGASPAPLSAAPSPQHAHLALPKPMSGPES
GSVIHADGGAMKDQDAIKLFVGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGC
AFLTYCARESAIKAQNALHEQKTLPGMTRPIQVKPADSESRGEDRKLFVGMLNKQQTEED
VYRLFEPYGVIEECTVLRGPDGNSKGCAFVKFSTHTEAQSAISGLHGSQTMPGASSSLVV
KFADTDKERTIRRMQQMVGQFGIFNPAVALPFSTYSSTYSTYTHALMQQQAAIMAASHGG
YLAPSMAFPATQIHQVGAINMNGLPPTPMTPVSGLSSPPANLASSAVPSIVTPIVNGFTG
IPPQPNGHPVEAVYANGLPPYSTQSPTAADTLQQAFTGVQQYTAIYPTTTLTPIGQTLPQ
PPQVIQQQQQQREGPEGCNLFIYHLPQEFGDNELMQMFLPFGSVISSKVFMDRATNQSKC
FGFVSFDNPGSAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggccagattcacgcagagtgaagcgaggcggcatcagcagcagcagcagcagcagact
cccccgcaacccgcccacgccagcgcgctcctcggcgcgtcacccgcaccactgtcagca
gccccgagcccgcagcacgcgcacctcgcgctccccaagcccatgagcggccccgagtcc
ggctccgtgatccacgccgacggcggcgccatgaaggaccaggacgccatcaagctcttc
gtgggccagataccgcgcaacctcgaggagaaggacctgaaaccgctgttcgagcagttc
ggcaagatccacgagctcaccgtgctgaaggaccgctacaccggcatgcacaaaggctgc
gcgttcctcacctactgcgctcgtgagtcagccatcaaagcccagaatgcactgcacgaa
cagaaaactctgccagggatgacacggcctattcaggttaaaccagctgacagcgagagt
cgtggagaggacaggaagctgtttgttggcatgctgaacaagcagcagacggaggaggat
gtgtaccgccttttcgagccttatggagtgattgaagagtgcaccgtattgaggggtcct
gacggaaacagcaaaggatgtgcctttgttaagttctccacacacaccgaggctcagtca
gcaatcagtggcctccatgggagccagaccatgcctggagcatcctccagtctggtagtg
aagttcgcagacactgataaggagaggactatccgccgcatgcaacagatggtcggccag
tttggcatcttcaaccctgctgtggctctgccattcagcacatacagcagcacctacagc
acctacacacacgctctgatgcagcagcaggcggccataatggctgcgtctcacggtggc
tacctggcacccagcatggcgtttccggctacacagatccaccaggtgggggcgatcaac
atgaacggcctgccgcccactcccatgactccagtgtcaggactgagctctccccctgct
aacctggcatcctcggccgtgcccagcatagtgacccccatcgttaatggcttcactggc
atcccaccgcagcccaatggtcatccggtggaggcggtctacgccaacggcctgccaccg
tactccacccagagccccactgccgccgacacacttcagcaggccttcaccggcgtccaa
cagtacacagccatttaccccaccaccacactgacccctataggccagacactgccacag
ccgcctcaggtcattcaacagcagcaacagcagagagaaggtccagagggctgcaatctc
ttcatctaccacctgccacaggagtttggtgataacgaactgatgcagatgtttctgcct
tttggctctgtcatctcctccaaagtgtttatggaccgagctaccaaccagagcaagtgt
tttggctttgtgagcttcgataaccctggcagtgcccaggcagccatccaggccatgaac
ggcttccagatcggcatgaagcgcttgaaagtgcagctcaaaaggccaaaggatgccagc
cgcccctactga
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