Pangasianodon hypophthalmus (striped catfish): 113533554
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Entry
113533554 CDS
T05759
Symbol
lingo3
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113533554 (lingo3)
Membrane trafficking [BR:
phyp04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
113533554 (lingo3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
LRR_1
I-set
Ig_3
ig
LRR_14
LRR_EndoS
LRR_LRWD1
Ig_2
LRRNT
LRR_9
LRR_RPS2
V-set
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
113533554
NCBI-ProteinID:
XP_026781568
LinkDB
All DBs
Position
Unknown
AA seq
604 aa
AA seq
DB search
MAALWGLGWLGVSLTLLALAPVCQSCPPRCDCVAQLRSVSCQRKRLSGVPEGIPTETRLL
DLSRNRLRWVSPGDLAPYPRLEEVDLSENLISTLEPNAFASLQALRTLHLRGNQLKLVPM
GAFARLSNLTTLDLSENKIVILLDYTFQDLHSLKHLEVGDNDLVYISHKAFSGLLGLEDL
TIERCNLTSISGQTLSYLRNLVTLRLRHLSISTIEDQNFRKMSALRGLEIDNWPYLEYIS
PFSFQGLNLTWLSITNTNITAVPSASFRNLVYLTSLNLSYNPISVLEPWAFKDLIRLKEL
HMVSTNLQAVEPHALGGLRQIRVLNLSNNELVTLEESSFHSVNSLETLRVDGNPLSCDCR
LLWILQRRRTLNFDGKMPICAAPPEVQGNILSSFPDSALFDYFTCQKPKIRNRKLQQVTV
REGQLVSFLCRADGEPAPAIIWISPQRRKITSKSSSRITVLPGGTLEIRYAQVTDSGTYI
CIASNAGGNDTYFATLTVKGQPVDHALFANRSLYAVDFNDTGLNSTRVFLKFTLDLTTIL
VSTAMGCITFLGVVLFCFLLLFVWSRGRGQRKNNFTVEYSFRKTEGPTTSSTSGGTRKFN
MKMI
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggctgccttatggggcctgggctggctgggtgtgagcctcaccctgttggccctcgcc
ccggtgtgccagagctgcccgccacgctgtgactgtgtggctcagctccgctccgtgtcc
tgccagcgaaagcgtctgtcgggtgtacctgagggcatccctacagagacccggctgctg
gacctcagtcggaaccggctacgctgggtgtcaccaggagatctggcaccatatccacgg
ctggaagaagtggacctcagtgagaacctcatctccactctggagcccaatgcctttgcc
agtctacaggcactgcgaacactgcatcttcgtggaaaccagctgaagctggtgcctatg
ggcgcctttgctcgcctgtcaaacctcactaccctagacctgagtgaaaacaagattgtc
atcctgttggattatacatttcaggacctgcacagtctcaaacaccttgaggttggtgac
aatgacttggtctacatctctcataaagctttctcaggattgctgggtctggaagactta
accatagaaagatgcaacctgacttcaatctctggtcaaaccctatcctacctgcgcaac
ctggtcacccttcgattacgccacctcagcatctctaccatcgaagaccaaaacttccgc
aagatgtccgctttgcgggggctagagatagacaattggccatacttggaatacatctcc
ccctttagtttccagggtctaaacttgacctggctgtccattactaacaccaacattact
gcagtcccttctgcttctttccgcaaccttgtctacctgacatcccttaacctctcctac
aaccccatatctgtgctggaaccctgggcgttcaaggatcttataaggctgaaagagcta
cacatggtcagcactaacctgcaagctgtggagcctcatgctctgggtggtctgaggcag
attcgggtgctgaacctctccaacaatgagctggtcacactggaggaaagctcctttcat
tccgtcaacagccttgaaactttacgagtagacggaaatccactttcttgcgactgccgg
cttctctggattctgcaacgcagacgcactctgaactttgatgggaaaatgccgatctgc
gctgctccacctgaggtacagggtaatattctgagcagctttccggattctgcattattt
gactacttcacttgccagaagccgaagattcgcaaccggaagcttcaacaagtgacagtg
cgtgagggtcagttggtgtccttcctgtgtcgtgctgatggtgaaccggcgcctgccatc
atctggatctcaccacagcggcgaaagatcacctcgaaaagcagcagcaggatcacagtc
ttaccaggtggaacgttggagatccgatatgcccaggtgactgacagtggcacgtacatc
tgcatcgccagcaatgcaggtggcaacgacacctactttgccacactgacggtgaaagga
caaccggtggaccacgctctgttcgccaaccgttctctgtatgcggtggactttaatgac
actggtctgaacagtacacgtgtcttccttaagttcacacttgacctcaccacaatcctg
gtgtctacagccatgggctgcatcaccttcctgggtgtagtactcttctgtttcctgctg
ttgttcgtgtggagccgcggaaggggccaacgcaagaacaacttcacagtagagtactca
ttcaggaagacagaggggcccactaccagttcgacctctggagggacccgcaagttcaac
atgaaaatgatatga
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