Pangasianodon hypophthalmus (striped catfish): 113533567
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Entry
113533567 CDS
T05759
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2-like
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phyp04040
]
113533567
Ion channels [BR:
phyp04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
113533567
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
LPD1
Motif
Other DBs
NCBI-GeneID:
113533567
NCBI-ProteinID:
XP_026781585
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All DBs
Position
Unknown
AA seq
1102 aa
AA seq
DB search
MDRNELSPGSGVVAQKPAVVSGCGAQPSHCASRCDTRLSNQCGPTSHDIMDEAEDSEEEP
KFQHPRLRRAGATGGGGGGGGAGNNKMQNFASGGGAALKSSSNDEIPAVQDTSDLEQVEV
VAPTDAATAVRTFAPARLSDAAARDDPDSGKASPLALTVDACNVPGEGGGHGAAPVSAMK
CNKNGECRRDSGTGSLRSIMSKQDKQDANKRATSSSTSGTDAPAAPAGPGDSSSPAAVPD
KKDSKVSFSNAPSRKASASMQSQQPRNSVTFLKSEDGTQIAPEDAEARGSQASFMQRQFG
SMLQPGVNKFSLRMYGSQKAVEREQERVKSAGKWIIHPYSDFRFYWDFTMLLFMVGNLII
IPVGITFFKEETTTPWIIFNVVSDTFFLMDLVLNFRTGIIIEDNSDIILDPKTIKKKYLK
TWFVVDFVSSIPVDYIFLIVEKGIDSEMYKTARALRIVRFTKILSLLRLLRLSRLIRYIH
QWEEIFHMTYDLASAVMRIFNLIAMMLLLCHWDGCLQFLVPMLQDFPSDCWVSLNKMVND
TWSELYSFAVFKAMSHMLCIGYGRQAPESLSDIWLTMLSMIVGATCYAVFIGHATALIQS
LDSSRRQYQEKYKQVEQYMSFHKLPADFRQKIHDYYEHRYQGKMFDEESILEELNEPLRE
EIVNFNCRKLVASMPLFANAEPNFVTAMLTKLRFEVFQPRDYIIREGTIGKKMYFIQHGV
VNVITKGTLGMKLSDGSYFGEICLLTRGRRTASVQAETYCRLYSLSVDNFNEVLEEYPMM
RRAFETVAIDRLDRLGKKNSILMHKVQHDLNSGVFNNQENEMIQEIVKYDREMVKLVDFQ
RPRAMSMTASVPGGIFAPPGQSQGTSAIATLQQAVAMSFCPQMANPLVGPGSLQSPRMVR
RFQVIQNLSSPASVSPMQPQPPGPMPGGACASAATSSPPVQSPLAPTGSRTFQYGCSPMG
GRTGSQLSLVQQHVPSPTRKSAHSLQQADSLSQDARALSTSQPSLPQDGVTGMGTSPPPS
AHVSSTSIGPQQAPHPAIPGPSGIRSAVPHRMVQPHQMSPSTPPPVSGAGPSYLEPIVHK
KDSIVSLPETDSTIRSRLSSNL
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atggaccggaatgagctttcccccgggtctggagttgtcgcgcaaaagcctgcggtcgtg
agcggttgtggcgcacagccgtctcattgcgcaagccgctgcgacaccagactgtccaac
cagtgcggcccgaccagccacgacatcatggacgaggcagaggacagtgaagaagagccc
aagtttcagcacccgcgactcaggcgagccggtgccaccggaggaggaggaggaggagga
ggagcaggcaacaataagatgcaaaacttcgcgtcgggagggggagccgcgctcaagagc
tcctccaacgacgagatcccggctgtccaagacacttcagatctcgagcaagtggaagta
gtcgctcccacggacgcagccacagcagttaggacgttcgcgcctgcgcgtctgagtgat
gcggcggcacgcgacgatcccgattccgggaaagcgtctcctctagcgctcacggtagac
gcctgtaatgttccgggagaaggaggtggccacggtgcagctccagtttccgcaatgaag
tgcaacaaaaacggcgagtgcaggagagactcgggcacaggcagcttgcgctccattatg
tccaagcaggacaagcaggatgcgaataaacgcgcgacgagctcctcaacttcaggcacg
gacgcgcccgctgctcccgcgggccctggagactcctccagtcccgccgccgtcccggac
aagaaggactccaaggtgtcgttttccaatgcaccgagtcggaaagcgtccgcttccatg
cagagccagcagcccaggaactccgtgacgttcctcaagtccgaggacggaacacagatc
gcacccgaggatgctgaggcgcgcgggagccaagcgagcttcatgcagaggcagttcggc
agcatgctgcagccgggggtcaacaaattctccttacgaatgtacggcagccagaaagcc
gtggagagagagcaggagcgcgtcaagtcagctggaaagtggatcattcacccttacagc
gacttcaggttctactgggattttacaatgcttctcttcatggtgggcaacctgatcatc
attccagtaggtatcacgttcttcaaggaggagaccaccacgccttggatcatcttcaac
gttgtctccgacaccttcttcctcatggacctggtgctcaatttccgcacaggcatcatc
atcgaagacaactccgacatcatcctggatcccaagaccatcaagaaaaagtacctgaag
acatggtttgtggtggactttgtctcatccatccctgtggattacatctttctcattgtg
gagaaaggaatagactcggagatgtacaagacggcccgggccctgcgcatcgttcgcttc
acgaagatcctcagtttgctgaggctgctgagactctcccggctcatccgctacatacac
cagtgggaggagattttccacatgacctacgacctggcgagtgccgtgatgcgcatcttc
aacctgatcgctatgatgctgctgctgtgccactgggacggctgtcttcagttcctcgtg
cccatgctgcaggacttcccctctgactgctgggtctcgctcaacaagatggtgaatgac
acgtggagtgagctatactcctttgccgtgtttaaggcgatgagtcacatgctctgtata
ggttacggccgtcaggctccagagagtttgtctgatatatggctgaccatgctcagcatg
atagtaggagccacctgctacgccgtcttcatcggccacgccaccgctctcatccaatcg
ctggactcctctcgtcgacagtaccaggaaaagtacaagcaagtggagcagtacatgtcc
ttccacaaacttccagcagacttccggcaaaaaatccatgactactatgagcaccgctac
cagggcaagatgtttgatgaggagagcatcctggaggagctgaacgaaccgctcagagag
gaaatcgtgaacttcaactgccgtaagctggtggcctcgatgcccctgtttgccaatgct
gagcccaactttgtcacagccatgctaactaagctccgctttgaggtcttccagccccgg
gattatatcatccgcgaaggcaccattggcaaaaagatgtacttcatccaacatggtgtg
gtcaatgtcatcaccaaaggaactctgggaatgaagctgtctgatggctcctattttgga
gaaatctgtttgctaacacgagggcgccggacagcgagtgttcaggcggagacatactgc
cgtctttattcactctccgtggacaacttcaatgaggttctggaggagtaccctatgatg
agaagagcttttgagaccgtggccattgacagactcgatcgtctaggtaagaagaactcc
atcttgatgcacaaagtgcagcatgacctcaactctggtgtcttcaacaaccaagagaat
gaaatgatccaggagattgtgaagtacgaccgagagatggtcaaactggtggactttcag
cgtccacgtgccatgtctatgacggcctcagtccctggtggcatatttgccccacctggc
cagtcgcagggcacctcagccatcgctaccctacagcaggccgtagccatgagcttctgc
ccacagatggcgaatcctctggtgggcccgggcagtcttcaatctccccgcatggtccgg
cgcttccaggtaatccagaacctttccagccctgcatctgtctctcccatgcagccacag
ccaccaggcccaatgccagggggtgcgtgtgcttccgctgccacatccagtccacctgtg
cagagcccactggcaccaacgggctcaaggacattccagtatggctgcagccccatgggt
gggcgtacaggatctcagctgtctcttgtccagcagcatgtgcccagtccaacacgcaag
agtgcccactctttgcagcaagcagacagcctgagccaggatgcccgggcgttgtccact
tcccaaccctctctgccccaggatggagtgacaggtatgggtaccagcccaccaccctca
gcccacgtctcctccacgtccattgggccacagcaggcccctcaccctgcaatacctggg
ccttctggaatcagaagcgctgtacctcatagaatggtacagccgcaccagatgtcgccc
tccactccaccccctgttagtggagcagggccaagctatctcgagccaatagtgcacaag
aaagattctatagttagcctccctgagacagactccactatcagatccaggctgtcttcg
aacctctga
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