Pangasianodon hypophthalmus (striped catfish): 113533583
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Entry
113533583 CDS
T05759
Symbol
sned1
Name
(RefSeq) sushi, nidogen and EGF-like domain-containing protein 1 isoform X1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
113533583 (sned1)
Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
113533583 (sned1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
NIDO
hEGF
EGF_TEN
fn3
EGF_2
EGF_CA
Ig_DSCAM-DSCAML_C
cEGF
MAGP
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
113533583
NCBI-ProteinID:
XP_026781616
LinkDB
All DBs
Position
Unknown
AA seq
1350 aa
AA seq
DB search
MGRLRQLLLCLCTLLWLSMPSGVMPAVPLEDFYPFGHEQGDSQTITQDDGGSGLVEISVA
FPFFGDRHTGLYVNNNGLVSFLKEVSQFTPVAFPISGDRRVVAPFWADVDNRQAGIVFYR
ESKDPAMLKRATEDIHYYFPEFPTFTATWVLIATWHNVTFFGGSPVTPVNTFQVVLITDG
ELSFTIFQYHNVTWTTGMHASSGGDRSGLGGIAAQAGFNAGDGRRYFNIPGSRTDDVVEV
ETTTNVGYPGRWVFRIDDAQVEVGSCNDSASVCPHLRPCLNGGRCIDDCITGNPSFTCSC
LAGFTGRRCQIDIDECSSYPCQNGGTCTDGVNSFTCHCPPGFTGPLCETDIDECQENPCL
NGARCIEGEGSFTCQCQAGYTGSVCETDINECESMPCVNGGVCEDKVNNYTCTCTANFTG
SQCETELVIMTNSTSTETANQTTSCEQEGCKNCEYISSGNYNCTCKPGYYGDHCEEECLC
QNGGVCIDANGTCECPTGFTGLYCQFEVTQTPCSNSRPCPDGGPCLEYGGTYLCTCQTGI
DFEHDHKDFYPYVQPQSACDSSPCQNGGYCYEQDGGYTCECEHGYRGENCEKVRLSMCAS
SPCRNGGSCKEESGSYYCVCPYRFTGKHCEVGKPDPCASGPCMNGGTCFHYIGKYKCECP
GSFMGRHCEISKGASPALDGNDCGPPPKVKHAEVQFSSTSPGSLALYTCHPGYTPNPRAT
QSICSSHGSWSQPPLCDEINECLSQPCMNGGTCRDRVASFLCECESGYTGQRCQTEQDGC
ESNPCQNGGVCRGYRRRHLCVCKEGYTGDRCQTLENPCVLQPCGNRGFCRSDRRGNYSCA
CRVGHTGRDCERDLLPPSGLHVLRVEESEVELQWDQADTNQNLISGFAITYAPIGRSPRK
TDFLERQHSTYVLQGLSPGQLYNISTYSIKRNSNSNDISQPAIALIRTRPRKVDQLQVVN
VSSSQVWLQWLVQAGRHAAVNLVRVSLVPSDGSGTRTAVLNTSVTEYSFSSLLPGQMYTV
DVLTQSGLRPEDLPSTSHSSGPLHLWTKPLPPQNLSLSHVSSSTARVTWDRHPRSIPDGF
VVNVTHGLTTRSRYLPDGTLSMYTIRELSPGQHYRLALTAVRNTGHEQIHSVAQHLAFTT
LPLEEPQKKAERAQGGRDTSSRRTQTRTKLQHQGSDKDREHSEELPRYTELIDGRGRITA
KFTNSQRKVIRHRTKPEPPIKLERMEETTNKISLALEIPEEVTKRKSESQRDCRTQPCQN
GGTCIQSEDTFSCECPTSFKGRQCELYCQRVKHPCTRLYSETKSVPVWEDGVCHYLYKRT
YKVQQDICFREICEPVLNKKNPNRRTQRQQ
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atggggcggctgaggcagctgctgctatgcctgtgcacgctgctgtggctcagcatgcca
agcggcgtgatgccagctgtcccccttgaggacttttacccatttggacacgaacagggt
gactctcagaccatcacacaggatgatggaggatctggactggtggagatctcagtggca
ttccctttctttggagatcggcacactgggctctatgtcaacaacaatggccttgtgtct
tttctaaaggaagtgtcccaattcaccccagtggccttccccatctctggtgaccgcagg
gtagtagctccattctgggctgatgtagacaaccgacaagctgggatagtgttttacaga
gagagcaaagatcctgctatgctgaagagagctacagaagacatccactactatttccca
gaattccccacattcacagcaacatgggtcctcatcgctacttggcataatgtcactttt
tttggtgggagcccggttactccggtgaacacatttcaagtagtgctgattacagacggt
gagctctccttcaccatcttccagtaccacaatgtcacatggaccacaggaatgcatgcg
agcagtgggggagatcgctcaggcctggggggcatcgctgcgcaggcaggttttaatgct
ggcgacgggaggcgctatttcaacatcccggggtctcggactgatgatgtagtagaggtg
gagaccaccacaaacgtggggtatccagggcgctgggtgtttcgcattgatgatgctcag
gtggaggtgggcagctgcaatgactcagcgtcagtctgtccacacctgaggccctgtctg
aatggcggccgttgcattgatgactgcatcactggaaatccttctttcacttgctcatgc
ctggctggtttcactggccgtaggtgccagatagatattgacgagtgctcctcatatccc
tgtcagaacggaggcacgtgtacggatggagtgaacagctttacctgccactgtccacca
ggattcacaggacccctctgtgaaacagacattgacgagtgccaggagaatccatgcctc
aatggagcgcgatgcatcgagggcgaggggagcttcacctgccaatgccaggcaggttac
accggatctgtgtgtgagacagacattaatgagtgcgagtccatgccatgtgtaaacgga
ggtgtgtgtgaggacaaggtgaataattacacatgcacctgtactgcaaacttcaccgga
agccaatgtgagacagaattagtaatcatgaccaattccaccagtactgaaactgctaat
cagacaacttcctgtgagcaagaaggctgcaagaactgcgagtacatcagttctggaaac
tacaactgcacctgcaagccaggctactatggagaccactgcgaagaagagtgtctctgc
cagaatggaggtgtttgcattgatgcaaatggcacctgtgaatgtccaacgggtttcact
ggactctactgtcagtttgaggtcacacagacaccatgcagtaacagcaggccgtgtcca
gatgggggtccatgtttggaatatgggggcacatacctttgcacgtgccaaaccggcatt
gactttgagcatgatcacaaggacttctacccttatgtacagccccaatcggcctgtgat
tcttcaccatgtcaaaatggaggttactgctatgagcaggatggaggctacacctgcgag
tgtgagcacggctacaggggggaaaactgtgaaaaagtcagattaagtatgtgtgcctct
agcccctgccgaaatggcgggtcctgtaaagaagagtcagggagctactactgtgtgtgt
ccttaccggtttacaggaaaacactgtgaagtggggaaaccagacccgtgtgcctctggc
ccgtgcatgaatggaggaacgtgtttccattacatcggcaaatacaagtgtgagtgtcct
ggatccttcatgggaagacactgtgagatcagcaaaggagccagtccggctttggacgga
aatgattgtggtccccctcctaaggtgaagcatgctgaggtacagttctcttccaccagc
cctggctccttggctctgtatacatgccacccaggttacactcccaaccccagagccaca
cagagcatctgcagcagccatggttcctggagtcaacctccgctctgtgacgaaataaac
gagtgcttgtctcagccgtgtatgaatggaggcacgtgtcgagaccgagtggcctccttc
ctgtgtgagtgtgagtctggatatactggccaacgctgtcagacagagcaggatggatgc
gagtcaaatccctgccagaatggaggtgtgtgtcgaggctacaggaggaggcatctgtgt
gtgtgtaaagagggctacactggggatcgctgccagactttggaaaacccgtgtgtatta
cagccgtgtgggaaccgaggcttctgtcgcagtgacaggagaggaaattacagctgtgcc
tgcagggtgggacacacaggtcgtgactgtgagagagatctcctgcctccatctggcttg
cacgtgctgagagttgaggaaagcgaggtggagctacaatgggatcaagctgacaccaat
cagaacctgatcagtggttttgccatcacttacgctccgattgggcgtagcccacgaaaa
acagactttctggagaggcagcattcaacctatgtgctacagggcctgagtccaggacag
ctttacaacatctccacctactcaatcaaacgcaattccaacagcaacgatatcagccag
cctgcgattgccctcatacgcacaaggcctcggaaggtggatcagctgcaggtggtgaat
gtgtcctcgtcccaggtgtggctacagtggctagtgcaggcaggccggcatgccgctgtc
aacctggtgcgggtttctctggtgccctcggatgggagtggcactcgcactgctgtcctg
aacaccagtgttacagaatacagcttcagttctcttcttccaggtcagatgtacactgta
gatgtgctgacacagagtggacttcgtcctgaggacctgccttccaccagccactcttct
ggacccctgcacctctggacaaaaccattgcctccccagaacctctcactatcccacgtg
agctccagcactgcacgtgtcacatgggaccggcatccaaggagcatccctgatggcttt
gtggtgaatgtgacacatggcctaaccactcggagccgctatctgcctgatggaactctg
agcatgtacaccatacgagaattgagcccggggcagcactatcggcttgccctgactgct
gtgcgcaacacaggccacgagcagatccacagtgtggcccagcacttagccttcactaca
ctacctctggaggagccgcagaagaaagctgagagagctcagggaggtcgggacacgtct
agcaggcgaactcagactcgcactaaactacaacatcaaggctctgataaagacagggaa
cattctgaagaactgcccagatacacagagctgatagatggtcgggggaggataacagcc
aaattcaccaactcacagcgcaaagtcattcgccatcgcacaaaacctgaacctccaatc
aaattagagagaatggaggaaacaaccaacaaaatcagtctggctctggagatccctgaa
gaagtgacaaagaggaaaagtgagtctcagcgtgactgcagaactcagccgtgtcagaat
ggagggacttgcatacagagtgaagacactttcagctgtgaatgtccaacgagctttaag
ggcagacagtgtgaactgtattgtcaacgagtaaaacatccgtgtacccgcctctactct
gaaacaaagagcgtgcctgtatgggaggatggagtctgccattatctatataaaagaaca
tataaagtacaacaggacatttgttttagagagatctgtgaacctgtgctcaataagaaa
aatcccaaccgcagaacgcaaaggcagcaataa
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