Pangasianodon hypophthalmus (striped catfish): 113533648
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Entry
113533648 CDS
T05759
Symbol
gle1
Name
(RefSeq) nucleoporin GLE1 isoform X1
KO
K18723
nucleoporin GLE1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03013
Nucleocytoplasmic transport
phyp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113533648 (gle1)
03015 mRNA surveillance pathway
113533648 (gle1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phyp03019
]
113533648 (gle1)
Messenger RNA biogenesis [BR:
phyp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113533648 (gle1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GLE1
DUF1246
Motif
Other DBs
NCBI-GeneID:
113533648
NCBI-ProteinID:
XP_026781721
LinkDB
All DBs
Position
Unknown
AA seq
713 aa
AA seq
DB search
MPAESLRWETLEALKNSPKAKIKYSPDWLEKGEDILAGCKEVTSLSPLSEQVLKRLSPRS
VLKSGSCLGSVIPDASTSEDGLISRSSAVKMSPLLLTVENEVKVADNKSENLSSTVDMCS
SSPPPISFLSPKHTRMAGCIRICEKKHWAKAKAELNLRQEQQDCLVAGVASRESEQLKRF
EEFMELKQRQEYQSMRDMMEKETQESLGRQEKLKEEHRHRMKILNLRLREAEQQRLREAE
LERQRQLEGRDRLRALNAIQEEVLRLNQLLEPECYTQTSPTLDYTSYVTRGNQLCSQVSE
VVRTTTEGQFPTVEDMTVVEQALQEMRTLVRAIQEELAQAQEKKKNEQEEEEYRKKQAEM
KPQQEEQKKIAALSVKEKAKKQGLQTIADDSTLKWYKELQSLASHYAQSFEDLNNTKDMQ
TKKMRMELQKAATIPVSQISSISGSQLKEIFDKIDRLLLGRPVVSGGKSVSTSLHPHGLE
FVSYKLAEKFVKQGEEEVASHHEAAFPIAVVASGVWELHPKVGDLILAHLHKKCPYAVPH
YPPMKDGTSIEEYQQILGYRVDESGVEGQDSFLKRMSGMIRLYAAIIHLRWPYTNKQGMQ
FSYFSLQAGPHGLNHGWRWLAQMLNMEPLADVTATLLFDFLEVCGNALMKQYQGQFWKLL
LLIKEEYFPRIEAVTSSGQMGSVTRLKQFLENSLRNKQIEPPKGQLNSAFWRS
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgaaagtctgagatgggagacgctggaagctttgaaaaactcaccgaaagca
aaaatcaaatacagtccagactggcttgaaaagggggaggacattttagcaggctgtaaa
gaggtaaccagcctgtctcctctctctgaacaagttcttaagagactgagccctcggtct
gtgctgaaaagtggttcctgcttgggttccgtgatccctgatgctagtacatctgaagat
ggcctcatctctaggtcatctgctgttaaaatgtcaccactgctgctcactgttgaaaat
gaggtgaaggtggctgataataaatcagagaatttgagctccactgtggacatgtgcagc
agttcaccaccacccatctccttcctctcacccaagcacactcggatggctggctgcatc
cgcatctgtgagaagaaacattgggctaaagccaaggcagagctgaacctgaggcaggag
cagcaggactgtctggtggctggtgttgccagtcgggaatcagagcagcttaaacgcttt
gaggagttcatggagcttaagcagagacaggagtaccagagcatgagggacatgatggaa
aaggaaacacaggaaagccttggacgccaggagaagttaaaggaagaacacagacataga
atgaaaatcctaaacctgcggctgcgggaggcagaacagcagaggctgagggaggcagag
ctcgagcggcagaggcagctggagggcagggataggctgagagcactcaatgccattcaa
gaggaggtgcttagactcaatcagctcctggaacctgaatgttacacacaaacaagcccc
accttggactatacttcttacgtcacccggggcaaccaactttgttcacaggtttcagag
gtggtacgcactacgactgaaggacagtttccaactgttgaggacatgactgtggtagaa
caggccctacaggaaatgagaacactggttagagccatccaagaggagcttgctcaggca
caagagaaaaagaagaatgagcaggaggaagaagagtataggaagaaacaggcggagatg
aaaccccagcaagaagaacagaagaaaattgcagcattatctgttaaagagaaagccaaa
aaacaaggcctgcagactatagctgatgacagcaccttgaagtggtacaaagaactgcaa
agtttggccagccactatgcccagtcctttgaagatttgaacaacacaaaggatatgcag
acaaaaaaaatgagaatggagctccagaaagctgcaacaattcctgtgagccagatctct
agtatttcaggttcccaactgaaggagatttttgacaagattgacagactgttattagga
cgaccagttgtgtctggtggaaagtcagtttccacatccctgcatcctcatggactagaa
tttgtgagctataaattggcagaaaagtttgtgaaacaaggagaagaggaggtagcatct
caccatgaagctgcattccccattgcagttgtggcttcaggtgtatgggagttgcaccct
aaagtaggagacctcatcttagcacatctccacaagaagtgtccatatgctgttcctcac
taccccccaatgaaggatggcacctccattgaagaatatcaacagattctgggatatcgg
gtggatgagtcaggggtggaaggtcaggacagtttcttaaaaaggatgtctggaatgatc
cgactctatgcagccataatacacctaagatggccttatactaacaaacaagggatgcag
ttctcatatttctcgctacaggctggtcctcatggactgaatcatggctggcgttggttg
gctcagatgctgaacatggagcctcttgctgacgttacagcaactcttctgtttgacttt
ctagaggtttgtggaaatgcacttatgaaacaataccaagggcagttttggaagcttctg
ctcctcatcaaagaggaatattttcccaggattgaagcagtcaccagcagtggtcagatg
ggctctgtaacaagacttaaacagtttctggagaactccttaagaaacaagcagattgag
ccacccaaaggacagctgaactcagccttttggagatcctga
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integrated database retrieval system
