Pangasianodon hypophthalmus (striped catfish): 113533737
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Entry
113533737 CDS
T05759
Symbol
lrfn5
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
113533737 (lrfn5)
Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
113533737 (lrfn5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_5
LRR_1
ig
LRR_9
Ig_2
C2-set_2
DHU1_N
fn3
Sp38
C2-set_3
LRR_Zer-1
OAD_gamma
Ig_DSCAM-DSCAML_C
LRRCT
Ig_5
Motif
Other DBs
NCBI-GeneID:
113533737
NCBI-ProteinID:
XP_026781833
LinkDB
All DBs
Position
Unknown
AA seq
775 aa
AA seq
DB search
MEKLLICLLVIGMAVKAQICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRHTVELRLAD
NFVTSVKRKDFANMTRLVDLTLSRNTISYITPHAFADLENLRALHLNHNRLTRIGNDTFS
GMSKLHHLILNNNQLTHIHLGAFNDLLALEELDLSYNNLETIPWEAIQKMISLHTLSLDH
NMIEYIPEGTFSLLQKLNRLDVTSNKLQKLPPDPLFQRAQVLATSGVLTSSSFALSFGGN
PLHCNCELLWLRRLSREDDLETCATPPHLSGRYFWSIPEEEFLCEPPLITRHSQEMRVLE
GQRVTLRCKARGDPEPVIHWISPDGKLVSNSSRTIVYNNGTLDILISTVKDTGSFTCISS
NPAGEAHQTIELVIIKLPYISNSTNNIQEPDPGSSDISTSSRTGANGSNHTADSKASSDK
RVVIAEATSSTALIKFNFQRNIPGIRMFQIQYNGTYDDSLVYRMIPPTSKNFLVNNLAAG
TLYDLCVLAIYDDAITSLTATRVVGCVQFTTESEYLRCHFMQSQFLGGTMILIIGGIIVA
SVLVFIIILMIRYKVCMSGDRGKGTATTGVQPDAAASPSANKEGVMAEGGDDCQKSSAPG
FPDSLTQSSETSLPDCSTETSVVSQSWDTGGSSGSIKPKRRPAPKPEEKTDLALGAETHN
TNRNNSKTPLLRSVPPSGPAPLLPSCFRDTPILRRAPPRPSVSKYLTLPAEGTRAAPRRY
SLNEDLSKHLCHAGKPGNARCKRSVSMNGMLASMGNSDLDKGVYSSSEWILESTV
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagctgctcatctgcctgttggtcattggaatggcagtgaaggcccagatctgt
ccgaagcgctgcgtgtgccagattttatctcccaacctcgcaacactctgcgccaaaaaa
gggcttctgtttgtgccacccaatatcgaccggcacacggtggagctacggctcgctgac
aactttgtaactagcgtcaaacggaaagacttcgccaacatgaccaggctcgtggacctg
accttgtcgaggaatacgataagttacattacgcctcatgcgttcgcagacttggaaaac
cttcgcgccttgcacttgaaccataacaggctgactcggatagggaatgacacgtttagc
ggaatgtccaagctgcatcatttgattctcaacaacaatcagttgactcacatccatctg
ggagcttttaacgaccttctggccctggaggagctggatttgtcctataacaaccttgaa
acgataccctgggaggcaatccagaagatgatcagccttcatacactcagcttggaccac
aacatgattgagtacattccagaaggcaccttttccctgttgcaaaaactcaaccgactg
gatgtgacctccaacaagctccagaagcttccaccggatcctcttttccaaagggcgcag
gtcctggcaacatctggagtgcttacttcttcatcgtttgccctcagtttcggtggaaat
cctttgcactgcaattgcgagctgctctggcttcgtcgactgagccgtgaggacgatttg
gagacttgcgcgactccgccgcacttatccggacgatatttctggtctattccagaggag
gaattcctgtgtgagccgccccttatcacgaggcactctcaagagatgagggtgctcgag
ggacaacgcgtaacccttcgatgcaaagcgagaggagatccggagcctgtgatccactgg
atatcacctgacggcaagctggtctcaaactcctcacgtaccatcgtttacaataacggg
accttggatatcttgatcagcacggtgaaagataccggatccttcacttgtatctcttct
aacccagctggtgaagcccaccaaaccatcgagcttgtcattatcaagcttccgtacatc
agcaacagtaccaataacatccaggagccagatcccggctcgtcggatatttccacctcc
agcagaactggagccaacggaagcaaccacacagcagactcgaaagcgagttcggataag
cgtgtggtgatagccgaggccacttcatccacagcactcattaaatttaacttccaaagg
aatattcctggaattcgcatgtttcagatccagtacaacggcacctacgatgactctctt
gtttacagaatgatcccaccgacgagcaaaaacttcctggtgaacaacctggcggctgga
acgctgtacgatctctgcgtcctcgccatctacgacgacgccatcacgtccctcacggcc
acgcgtgtcgtcggctgcgttcagttcaccaccgagtccgagtacctccgctgccacttc
atgcagtcgcagttcctcggcggaaccatgatcctgatcatcggcggcatcatcgtggcc
tccgtcctcgtcttcatcatcatcctcatgatccgctacaaggtgtgcatgagcggagac
cgcggcaagggaaccgccaccaccggggtgcagcccgacgccgccgccagtccctcggcg
aataaagagggcgtcatggccgagggcggggacgactgccagaaaagctccgcccccgga
ttccccgattccctcacgcaatcttcagagacttctctgcctgattgttccaccgagacg
tccgtcgtgagccagagttgggacacgggaggatcttcggggtccatcaagccaaaacgg
agaccagcgccgaagccggaggagaagactgatctggcgctcggtgccgagactcacaac
accaaccgcaacaactccaaaactccactactgcgttccgttcctccgtcaggccccgcc
cctttgctgccttcttgcttcagggacactcccatcctgaggagggcgccacctcgtccc
tccgtatcaaagtatctcacactgccggcggaggggacgcgagctgcaccgcgcaggtac
tcgctaaacgaagacttatccaaacacctctgccacgccggcaagcccgggaacgcccgg
tgtaagcggagtgtatccatgaacggaatgctagccagcatgggaaattcggatttagat
aaaggggtgtattccagttcagagtggatcctagagagtacggtgtga
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integrated database retrieval system
