KEGG   Pangasianodon hypophthalmus (striped catfish): 113533741
Entry
113533741         CDS       T05759                                 
Symbol
wdhd1
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1 isoform X1
  KO
K11274  chromosome transmission fidelity protein 4
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:phyp03036]
    113533741 (wdhd1)
Chromosome and associated proteins [BR:phyp03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Other sister chromatid cohesion factors
    113533741 (wdhd1)
SSDB
Motif
Pfam: WD40_WDHD1_1st Mcl1_mid Ctf4_C HMG_WDHD1 Beta-prop_EML_2 WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 WDR55 ANAPC4_WD40 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd Beta-prop_HPS5 Beta-prop_WDR35_TULP_N eIF2A HMG_box Beta-prop_IFT140_1st Beta-prop_TEP1_2nd Beta-prop_Vps41 Beta-prop_WDR19_1st WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_WDR75_2nd Beta-prop_IFT122_1st KNTC1_N GLV1-2
Other DBs
NCBI-GeneID: 113533741
NCBI-ProteinID: XP_026781835
LinkDB
Position
Unknown
AA seq 1114 aa
MPCERKPMRYGHSEGHMDVCFDEHSKCIVTCGSDGDVRIWESLDDDDPKSINVGEKAYSV
ALRGGKLVTAVSNNTVQIHTFPDGDPDGILTRFTTNANHVAFNSSGTRVAAASSDFLIKV
IEVMDSSQQKTLRGHDAPVLSVTFDPSDEYVASSSCDGSVAVWSIEEQTQVANWKVLQKS
SDVSNAKSLCRLAWQGSGKLLAVPVDTTVHLYERDSWTHVGTLSDDLLTQVVNVVVWSPC
GKFLAAGTVGGTLSVWDVEAKLCIERQKHEKGYTVCGMAWHPSGGQIAYTDTEGCLGLLD
GVCASSSSSSSSSSSSITTKNTTQAAESKEQNGYDDLFDEDDGGLLDECRSVSAGEEDDE
VLVPAARKPRSRGNVLDDDENSRDTGSVKVDHLAEDDGESGVLPAPAPPVAAAPRPVYEG
PMPTAPQRAFQPGSTPAHLMHRFMVWNSVGIVRSYNDEQDNAIDVEFHDTAVHHAMHLTN
TLEHSMADLSQEALLLACEGTDELASKLQCLHFSTWDTNKEWIVDLPKGEDVRTLCLGQG
WVAAATSAMLVRLFSIGGVQREIFSLPGPVVCMAGHGEQLLIVYHRGTGFDGDQALGVQL
LQLGQKRKQIIHGEPLPLSRKSHLTWMGFSAEGTPCAVDSEGVVRMLNRSLGNTWTPVCN
TRDNCKSRSDHYWVVGIHENPQQLRCIPCKGSVFPPTLPRPAVAILPFKLPFCQTSTEKG
QMEEQYWRSVLFHNHFGFLSSSGYEMDEESQRQQEKEQQELLMKMFALSCKLEREFRCVE
LAEMMTQSVVTLAIRYASRSRRMLLAQRLNELALEKASQLQEEAEPEEEAAYHSQAQNAR
FSQASRVARHSSSRAAQEDCDEEEQEDEEEPMEAEEEPESKKSRVNPFSKGTKSPEKPSI
KPVSKEGRVNPFKVSGSGKPSTSSSPQPRATNVLDNMTASNRKHTSSSKAPVLKPLAPKP
RSKAQATLLQMSTSKIASKKPEEKEMEKPRAEKPEKPAAAPGDNVENTRPKTGFQLWLEE
NRKSILADKPDLEEMDIIKEAMSRFRTLSSEERLKWTEKAKGSTGEGADLKKRKRDEEGN
NEVDEQVDADENSAKKKKPLDTSAKLSAFAFNKN
NT seq 3345 nt   +upstreamnt  +downstreamnt
atgccctgtgagaggaagccgatgcgctacggccactcagagggccacatggacgtctgc
tttgacgagcacagcaaatgcattgttacgtgtggaagcgacggagacgtgcgcatatgg
gaaagtctagacgacgacgatcctaaatccataaatgtcggcgagaaggcctactctgta
gctttgagaggtgggaaattagtcacagccgtttccaacaacactgttcagatccacacg
ttccccgatggagatcccgatggaatactcacccgtttcaccaccaacgcaaaccacgtc
gccttcaactccagcggcacacgagtcgctgctgcctccagtgacttcctgataaaggtg
atcgaggtgatggacagcagtcagcagaagactctacgtggtcacgatgcacctgttctc
agtgtgacctttgaccccagcgatgagtatgttgcctcctccagttgtgacggctcggtg
gccgtgtggtctatagaggagcagactcaagtggcgaactggaaggtgctgcagaagtcg
agtgacgtgagcaacgctaagtctctgtgcagactcgcatggcaaggatctgggaagctg
cttgcagttccagtggacaccacagtacatctgtatgagagagactcctggactcatgtt
ggcactctatctgatgaccttctcactcaggtcgttaacgtggtggtttggtcgccgtgt
gggaagtttctggcagccggaacagtgggaggaactctctccgtttgggacgttgaagcg
aagctgtgcattgagaggcagaagcatgagaaaggctacacggtgtgcggcatggcctgg
catccctccggaggacagatcgcttacacggacaccgagggctgcctgggcctgctggac
ggcgtgtgtgcatcttcctcatcctcctcttcctcatcctcctcttccattaccacgaag
aacaccacgcaggctgctgagagtaaagagcagaacggttatgacgatctgtttgatgag
gatgacggcggcctgctagatgaatgtcggagcgtctcagcgggtgaagaggacgacgag
gtcctcgtgcctgccgctcgcaaaccgcgcagcagagggaacgtcctggacgatgacgag
aactctagagacaccggctcggtgaaggtggatcatttagctgaggatgatggagagagc
ggcgttttgcccgctccggcgccccccgtcgcagcagcgccacgcccggtttacgagggt
cccatgcccactgcgcctcagagagccttccaacccggctccactccggcacacctcatg
caccgtttcatggtttggaactcggtgggtatcgtgcgcagctacaacgatgaacaggat
aacgccatcgatgtggagttccacgacactgccgtccatcacgccatgcacctcacgaac
acactggagcacagcatggccgatctatcccaggaggcccttctgctcgcctgcgaaggc
accgatgaactcgctagcaagctgcaatgcctgcacttctccacatgggacacgaataag
gagtggatagtggacctgccgaaaggcgaggacgtgaggacgctgtgtttgggacaaggc
tgggtggcggcggccaccagtgccatgctggtgcgtctcttctccatcggcggcgttcag
agagagattttcagcctcccgggccctgtagtgtgcatggctggacacggggagcagctt
cttatagtctatcacagagggactgggtttgacggcgaccaggctctcggggtgcagctt
ctgcagctcggccaaaaaaggaagcagatcatccacggtgaacctctgcctctttcccgc
aagtcccacctgacatggatgggcttcagtgcagaaggaacaccatgtgccgtggactcg
gagggcgtggtgcgcatgctgaatcgctctctgggaaacacatggactcctgtatgtaac
accagagacaactgcaagagcaggtcggatcattactgggtggtcggaatccacgagaat
ccccagcagctcaggtgcattccctgtaaaggatccgtttttcccccgactcttcctcgt
cctgctgtggccatcctgcccttcaaactgcccttctgccagaccagcacggagaaaggc
cagatggaggagcagtactggcgctcggtgctcttccataatcactttggcttcctgtcg
tccagcggttatgagatggacgaggagagtcagaggcagcaggagaaggagcagcaggag
ctgttgatgaagatgttcgcgctgtcgtgtaagctggagcgcgagttccgctgtgtcgag
ttggctgagatgatgacgcagagtgtggtgacgctcgccatccgctacgcttcacgctcc
aggcgcatgcttcttgctcagaggctcaacgagctcgctctggagaaggccagtcagcta
caggaggaggcggagccagaggaggaagcagcctatcacagccaggcacaaaatgcaaga
tttagtcaagccagtcgagtcgccagacactcgagcagcagagcggcacaggaagactgc
gatgaagaagagcaggaagacgaggaagagccgatggaagcagaggaagaaccggaaagc
aaaaagtcacgtgtgaatccgttcagtaaaggcacaaaatcacctgaaaaaccttccatc
aaaccagtcagcaaagaaggccgtgtgaacccctttaaggtcagtggatcaggaaagccg
tccacgtcttcatcaccgcagcccagagctactaacgttctggacaacatgacggcatcc
aacaggaaacacacatcgtccagtaaagctccagtgctaaagcctctggcaccaaaacca
cgctccaaggctcaggctacattgctgcagatgagcacgtctaaaatagcttctaagaag
ccggaggagaaggagatggagaaaccgagagcagaaaaacctgagaaaccagcagcagca
cctggagacaacgtggagaacaccagaccaaagaccgggttccagttgtggctcgaggag
aacaggaagagcattctcgctgacaagccagacctggaggagatggacatcattaaagag
gccatgagccgcttccgtacgctgtcaagcgaggagaggctgaagtggacggagaaggcg
aaaggctcgactggagagggtgcagacctcaagaaaagaaagcgagacgaagaggggaat
aatgaagtggacgagcaggtggatgcggatgaaaacagcgcaaagaagaaaaagcctttg
gacacttcagctaagctttcggcgtttgctttcaacaagaattaa

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