Pangasianodon hypophthalmus (striped catfish): 113533751
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Entry
113533751 CDS
T05759
Symbol
irx2
Name
(RefSeq) iroquois-class homeodomain protein IRX-2 isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113533751 (irx2)
Transcription factors [BR:
phyp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
113533751 (irx2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
PFF1_TM
RPN2_C
Motif
Other DBs
NCBI-GeneID:
113533751
NCBI-ProteinID:
XP_026781852
LinkDB
All DBs
Position
Unknown
AA seq
445 aa
AA seq
DB search
MSYPQGYLYQPGPGSLALYPLRSEELELAARCSSSSSSSSSSSSSSSSTGSAFTPYPASA
AFTASATGGFASALSYHTDPATGFPSYMASPYDPPPSAMAAPLGFPPYGSAGFPPPPYQL
NDPAYRKNATRDATSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL
KKENKVTWGARAKSEDEDEEEGARAERKEEEEEEDDKHADNGDASAEDEGISLHVDSLTD
HSAESDGEKVLCRIDDFSCKPSPEAKEKRSEIDLTSAHGGHGGLSPKPMTSSPLTGVEAP
LLDAHRDKNKTCADVQSQNTKPKLWSLAEIATSDPKQPLQSQNCPSGGGIWTSSQSGAAP
SASILARPIYYTSPFYGNYANYGNFGQGILRYGSIHKHTPETTMLKANHANHIQTEQHFR
ALSAEAKKADSGDVCTLGPQSYLSS
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtatcctcagggttacctgtaccagcccggcccgggctctctggctctctacccg
ctcaggagtgaagagctcgagctggccgcgcgctgctcgtcttcctcctcgtcttcgtct
tcctcctcctcatcctcctcgtccacgggttctgcgttcactccgtaccccgcgtccgcc
gccttcaccgcctccgccacgggcggcttcgcgagcgcgctgagctaccacaccgacccg
gccaccggcttcccctcctacatggcctccccgtatgacccccctccctcggccatggcg
gctccgctcgggttcccgccatacggcagtgcgggattcccgccgcccccgtaccagctc
aacgaccccgcgtaccggaagaacgccacgcgcgacgccacgagcacgctgaaggcctgg
ctgaacgagcaccggaagaacccgtatcccaccaagggcgagaagatcatgctggccatc
atcaccaagatgacgctcacgcaggtgtccacgtggttcgccaacgccagacggagactc
aagaaggagaacaaagtgacgtggggcgcgcgggccaagagcgaggacgaggacgaggag
gaaggagcgcgcgccgagcggaaagaggaggaggaagaggaggacgacaagcacgcggac
aacggagacgcgtccgccgaggatgagggcatcagcctacatgtggactctctgactgac
cactcggccgagtcggatggagagaaagtcctctgcaggattgacgacttctcctgcaaa
ccttctcccgaagcaaaagagaaacgctctgagatcgacctgacctcggctcacgggggt
cacgggggtctgtcacccaaacccatgacctcgtcacctctgaccggggtggaggcgccg
ctcttggacgcgcatcgcgacaaaaacaagacctgtgctgacgtccagagccaaaacacc
aagcccaagctctggtcgttggctgaaatcgccacttcagaccccaaacagccgctccag
agccagaactgcccctcagggggcgggatttggacctccagccaatcgggcgcggctccc
tcagcgtccatcttggccaggccgatttattacacttctcctttttacggcaattatgcc
aattatgggaacttcgggcaggggatcctgcgctacggctcgattcataaacacactcct
gagacgacgatgctaaaggctaatcacgctaatcacatccagacggagcagcacttcagg
gccttgagcgcggaggccaagaaagcagactccggtgacgtgtgcacactcggacctcag
tcttacctctcgagctaa
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