Pangasianodon hypophthalmus (striped catfish): 113533831
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Entry
113533831 CDS
T05759
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113533831
Membrane trafficking [BR:
phyp04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
113533831
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRR_EndoS
LRR_9
LRR_Zer-1
LRR_RPS2
C2-set_2
V-set
LRRNT
C2-set_3
Ig_C17orf99
LRR_6
Motif
Other DBs
NCBI-GeneID:
113533831
NCBI-ProteinID:
XP_026782002
LinkDB
All DBs
Position
Unknown
AA seq
609 aa
AA seq
DB search
MFVELCHQKWVSIVALLLLYCLQLSASDFLWPCPQKCICRQDTLEVNCSSKHLTVVPEGL
HISARRLNLSGNRLKTLSRRQFYGLTQLEELDLSENIISMIEVETFQGLKNLQILKIKNN
RLKIIPVGVFSGLPNLLSLDISKNEILVFLDYTFQEMVNLREMNAGENDLVFISQRAFVG
LQSLQELNVDRSNLTSIPTEAFSQLQSLTKLHLRRLNINVLPNNAFRRLYQLHTLQILQW
PSLETLNSNSLMSLNLTTLVISNCNLSAIPYASLRHLTHLIYLDLSYNPITSIEGNMLGE
LVRLREFHLVGGKLLRIEPGAFRCLVHFQLLNVSSNRLTTLEESAFHAVGNLQTLRLDRN
PLTCDCRLLWVVRRRLRLNFDGRQPTCSAPERGHKREFRDFSEAELPKVFICRQACILER
KLQEAKVDEGTNVQFECKADGYPPPSITWLSPQQTPFSSMGRIRVHANGTLEVRYAQVQD
TGTYRCIAANAAGNDSISASLLVRNSPRNYTTPNFFDDSWVETSLPPSTNSSAQVSSPYP
FDAKTLVIATTMGFLSFLSSVVICFVFMFLWSQSKGQIKHTATIDFVPRSSMGGGGDGAD
TGRFTMKLI
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtggagttgtgtcatcagaagtgggtctctatagtagcactcctgctactatac
tgtttgcaattatcagcgtccgatttcctatggccatgtcctcaaaagtgtatttgtagg
caggacacactagaggtcaactgctcttcaaaacacttaacagttgttccagaaggattg
cacatcagtgccaggcggctgaatctttctggcaaccgcttgaagacactgagtcggcga
cagttttatggattaacccaactagaggagctcgacctcagtgagaacattatatctatg
attgaagtggaaacatttcagggtctgaaaaatctacaaattttaaaaataaaaaacaac
cggcttaagatcattccagttggtgtcttttctggtttgccgaaccttctcagcctggac
attagcaagaatgagatacttgtgtttctagactacacatttcaggagatggtgaaccta
cgggaaatgaatgcaggggaaaatgacctggtgtttatctcacagagggcctttgttggt
ctgcagagcttacaggagctgaacgtggaccgcagtaaccttacctctatccctactgaa
gcattttctcagctccaaagcctgaccaaactgcacctacggagactcaacattaatgta
ttgcccaacaatgcctttcgtcggctgtaccagctgcatacactgcagatacttcagtgg
ccctcactagagactttaaacagcaacagccttatgagtctaaacctcaccaccttggtt
atcagtaactgcaatctgagtgccataccatatgcctcattgcgccatttaacacacctg
atctacttagatctgtcctacaaccctattacatctatagagggcaatatgctaggggaa
ttggtcagacttcgggagttccacttggtaggtggaaaactgctccgcattgagccaggt
gcctttaggtgtctggttcactttcagctgctcaatgtatcctcaaaccgacttacaacc
ttagaagagagtgccttccacgcagtcggaaacctacagaccttgcggctagacaggaac
ccactaacttgtgactgtaggctactgtgggtggtgcgacgccgtttgaggttaaacttt
gatggtcgccaacctacatgttctgcacctgaacgtggtcacaaacgggagtttcgggac
ttttcagaggcagagctcccaaaagtgttcatctgcagacaggcgtgtatcctggaacgt
aagctgcaagaagcaaaggtggatgagggaacaaatgtgcagtttgaatgcaaagcagat
gggtatcccccaccctctataacttggttatcaccccagcagactccattcagcagtatg
gggagaatacgagtgcatgcaaatggaactctggaagtgcgttatgcccaagtgcaggac
actggaacttaccgatgtattgcagctaatgctgcagggaatgatagtatttctgccagt
cttcttgtgaggaactcccctcgaaactatacaactcccaatttctttgatgacagttgg
gttgaaacttcattgcctccttccaccaactcttcagcacaagtgtcaagcccttacccc
tttgatgccaagactcttgtcattgctactactatgggtttcctttcttttctaagctct
gtggtcatctgttttgtgttcatgttcctctggagccaaagtaagggccagattaaacac
acagccaccattgactttgtgccacgttcttctatgggaggaggtggagatggtgcagac
acagggaggtttacaatgaagcttatctga
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