Pangasianodon hypophthalmus (striped catfish): 113533852
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Entry
113533852 CDS
T05759
Symbol
ascc3
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phyp03400
]
113533852 (ascc3)
Enzymes [BR:
phyp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
113533852 (ascc3)
DNA repair and recombination proteins [BR:
phyp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
113533852 (ascc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
Helicase_PWI
AAA_19
Motif
Other DBs
NCBI-GeneID:
113533852
NCBI-ProteinID:
XP_026782066
LinkDB
All DBs
Position
Unknown
AA seq
2205 aa
AA seq
DB search
MAPPRLTGALRSFSTVSKQEDLSLELCDLKAKRLKRQELFGREGLTWAKVVQFFTQQLEK
KEQQRGSQELKNLLHAAKQIVSTDFGQDAIESAAVFLFKTFHNKEQVSHEETRAIKQMFG
PFPASAAETACAAVSQLVAQHGESQVEAFIQTQTFNKPVDHGKSFGQNIAFSFDTYALDS
LDIFPWEEENSEGLSLDFNSFLSNHAGGRSAGLESTGAHSVSQSSSADRSILRREVEKYL
SGGNMGSSSVEELCTSLFEMLASTKSDDELQNELFEFLGPEGFEMISTLLQKRSDIVDSL
LSAPPDSRVSYPPDGMLKNVESAKPAYGCQVTIQSEQERQMMKLYRREEKRERKREKRGD
EGEPSEAVFHFDPKELRLQREQALLTARRSPVLGHQREYERIHYPHVYDAYAEAKKTSAF
IGGSKMLLPESIRRENDKMFEQVEIPPNEPMPIGFQEKPVYITELDEIGQLVFKGMKRLN
RIQSIVFETAYNTNENMLVCAPTGAGKTNIAMLTVLHEIRQHLQPGGVIRKDQFKIVYVA
PMKALAAEMTNYFSKRLEPLGIAVKELTGDMQLTKGEILRTQMLVTTPEKWDVVTRKSVG
DVALSQIVRLLILDEVHLLHEDRGPVLESLVARTLRQVESTQSMIRILGLSATLPNYLDV
ASFLHVNPYIGLFFFDSRFRPVPLGQTFVGIKTTNKIQQLHDMEEVCYDKVLEQVKAGHQ
VMVFVHARNSTVRTAMSLIEMAKNRGESSFFQPEQGPDYGHCEKQVQRSRNKQMREMFPD
GFGIHHAGMLRQDRTLMENMFSRGYLKVLVCTATLAWGVNLPAHAVIIKGTQIYDAKRGT
MVDLGILDVMQIFGRAGRPQFDKYGEGTIITSHDKLSHYLTLLTQQNPIESQFHASLADN
LNAEVALGTVTNVEEAVKWLSYTYLYVRMRANPLAYGISHKAYQMDPGLELYRKELVVEA
GRKLDKARMIRFDERTGYFASTDLGRTASHYYIKYNTIETFNEMFNAQKTEADILSIVSK
AEEFEQVKVRDEELEELEQLLCSFCELPAAGGVENGYGKINILLQTYIGRGEVDSFSLIS
DLAYVAQNAARIMRALFEIALRKRWPAMTYRLLNLCKVIDKRLWGWAHPLRQFATLPPTV
LSRLEEKNLTVDKLKDMRKDEIGHMLHHVNIGLKVKQCVHQIPAILMEATIQPITRTVLR
VRLTITPDFRWNDQVHGSVGEPWWLWVEDPINDHIYHSEYFLLQKKQVVSDEPQQVVFTI
PIFEPMPSQYYIRAVSDRWLGSEAVCVINFQHLILPERHPPHTELLDLQPLPVTALGNRE
YESLYKFTHFNPIQTQIFHTLYHTDTNVLLGAPTGSGKTIAAEMAIFRVFNKYPTAKVVY
IAPLKALVRERIEDWKVRIEEKLGRKVVELTGDVTPDMRAIAQADLIVTTPEKWDGVSRS
WQNRSYVQKVAILIIDEIHLLGEDRGPVLEVIVSRTNFISSHTSKPVRVVGLSTALANAR
DLADWLGIGQVGLFNFRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPTFQAIRSHSPAKP
VLIFVSSRRQTRLTALDLIAFLATEDDPKQWLHQDEREMTDIIATVRDSNLKLTLAFGIG
LHHAGLHERDRKTVEELFVNCKIQVLIATSTLAWGVNFPAHLVIVKGTEYYDGKTHRYVD
YPITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLGVLADHLNA
EVAAGTIASKQDAMDYITWTYFFRRLVMNPSYYNLDDITHETINKYLSNLVERSLRDLEC
SYCMEIQEDERTIEPLTYGRIASYYYLKHQTVRMFKERLKPELPIQELLSILTDAEEYAE
LPVRHNEDQLNSELAQRLPLQVNPHSYDSAHTKTNLLLQAHFSRAQLPCSDYSTDTKTVL
DNAIRICQAMLDVVANEGWLVSALSICNLVQMIVQARWLHDSSLLTLPHISQQNLYLFGK
WRSKGGKGGTRGYQGPIEGLPELIAACDGREEIFTAMVKEEFEPHQITQIWAFLSHLPVL
EVSLSVKGWWEGCEEQTERALSTRVTNIREQSSWLPVHADQEYVLQVSLQRLNAGQQRRR
QDSKAQAPRFPKPKDEGWFLVLGEVDKRELLAIKRVGYIRNRNVTSVAFYTPEQTGKCIY
TLYLMSDSYLGLDQQYDIHLNVIPASIAAQVNAEVTDGMSNMNLK
NT seq
6618 nt
NT seq
+upstream
nt +downstream
nt
atggctcctcctcggcttaccggtgcattgcgctctttctccacggttagcaagcaggag
gacctctcactcgagctgtgtgatttaaaggccaagcgtttgaagaggcaagagctgttt
ggcagagagggtctgacctgggcaaaggttgtccagtttttcacacaacaactagagaag
aaggaacaacagagaggatcacaggagctaaaaaatcttcttcacgcggccaagcagata
gtgagtacagatttcggacaggatgccattgaaagtgctgcagtcttcttgttcaagaca
ttccacaacaaagagcaggtcagccatgaagagacccgggccattaagcagatgttcgga
cctttcccggcctcagcagctgaaactgcctgtgctgctgtcagccagctggtagctcag
catggagagtcccaggtggaagctttcatccagacccagacgttcaacaagcctgtagat
catggaaagtcttttggacagaacattgccttctcttttgacacttatgccttagatagt
ctagatatttttccatgggaggaggaaaatagtgaggggctgagcctggacttcaacagc
ttcttgagcaaccatgctggagggcgtagcgctggtttagagagcactggagcacattca
gtgagccagagcagcagtgctgaccgttccatccttagaagagaggtggagaagtacctg
agtggaggcaacatgggttcatccagtgtagaggagctctgtacctcactgttcgagatg
ctggcttctaccaagagtgatgatgaacttcagaatgagctgtttgagtttcttggccct
gagggatttgagatgatctcaacgcttctccagaaaaggtctgatattgtggactctctt
ctgtctgcgccaccagacagcagagtcagctacccacccgatgggatgcttaaaaatgtg
gagtctgctaaacccgcatatggctgtcaggtgaccattcagtctgagcaggagaggcag
atgatgaaactctaccgtcgggaggagaaaagggagaggaagagagagaaacgaggagat
gagggtgaaccgtcagaagcagtttttcattttgaccctaaggagctgagactgcagaga
gagcaggcattgctgaccgcgcggcgttccccagtgttaggacatcagagagaatatgag
cgcattcactaccctcatgtctacgatgcttatgctgaagccaaaaagacctctgccttc
atcggaggctccaagatgctgctgcctgagagcatccggagagagaatgataagatgttt
gagcaggttgagatcccacccaacgagcccatgcctatcggcttccaggagaagcctgtc
tacatcacagagctagatgagattggacagctggtgtttaaaggtatgaagcggctgaac
aggatccagtccattgtttttgagacggcctacaacaccaatgaaaacatgctggtgtgt
gctcccactggagcaggtaagaccaacattgccatgctcacggttctgcacgagatccgc
cagcacctacagccgggaggcgtcatccgcaaagaccagtttaagatagtatatgtagct
ccaatgaaggctttagctgctgagatgactaattacttcagtaagcgcttggagccactg
ggcatcgctgtcaaagagctgacaggcgacatgcagctgaccaaaggggaaattctacgc
actcagatgttggtgacaactccggagaagtgggatgtggtgacaagaaaaagtgtggga
gatgtggctctgtcccaaattgttcgcttgcttatcttggatgaggtacacctgctgcat
gaggacagaggacccgtcttggagagtctggtggccaggacactgcggcaggtggagtca
actcagagcatgattcgcatcctgggcctgtctgccacgctgcctaattacttggacgtg
gcatcattcctgcatgtgaatccgtacattggcctgttcttcttcgacagccgctttcgc
cctgttccccttggacaaacctttgtgggaattaagacgacaaataagattcagcagctg
catgacatggaagaggtttgctacgacaaagtgctggagcaagttaaagctggacatcag
gtgatggttttcgtccatgcccggaactccactgtgcgcacggccatgtctctgattgag
atggccaagaaccgaggagagtcatcgttcttccagccagagcagggaccagattatggc
cactgtgagaagcaggtgcagcgctcacggaataagcagatgagggagatgtttccagat
ggatttgggatccaccatgctgggatgctgaggcaggaccgtacgctcatggagaacatg
ttctccagaggctacctaaaggtcctggtgtgcacagccactctggcctggggtgtcaac
ctgcctgctcatgcagtcatcattaagggtactcagatctacgatgcgaagaggggcacc
atggtggatcttggcatcctggatgtgatgcagatttttggacgtgctggccgtccacaa
tttgataaatatggagagggcaccatcatcacttcacacgacaagctgagccactacctc
accctcctcacacaacagaaccccatcgagagtcagttccatgccagcctggctgataat
ctcaatgctgaggtggctttgggaactgtgaccaacgttgaagaagcagtcaagtggttg
agctacacctacctctatgtacgaatgagagcgaatccgcttgcttacggcatcagtcac
aaggcctaccagatggatccagggctggagctctacaggaaagagttagtagtggaagct
gggcggaagctggataaagctcggatgatccgttttgatgagagaactggttattttgct
tctacagaccttggcagaacagccagccactactacataaagtataacacaattgagacg
ttcaatgagatgttcaacgctcagaaaaccgaagccgacattctgagcattgtctctaaa
gcagaggaatttgagcaggttaaggtgcgagatgaggagctggaggaactggagcagttg
ctgtgtagcttttgtgaactgccagcagctggaggagtagagaacggctacggcaagatc
aacatactgctgcagacctacatcgggcgcggcgaggtggacagcttctccctcatctcc
gacttggcttacgtggcccagaatgctgcacgtatcatgagggctctgtttgagatcgct
ctgaggaagcgctggccagccatgacgtacaggctgctcaatctatgtaaggtaattgat
aagcgcctgtggggatgggcacaccccctgcgtcagtttgccacgctgcctcccactgtg
ctgtccaggctggaggagaagaatctcactgtggacaagcttaaagatatgcgcaaagac
gagataggtcacatgttacaccacgtgaatattggcttgaaggtaaagcagtgtgtccac
cagattcctgcaatactgatggaagctaccattcagccgatcacacgaaccgtcctgcgc
gtgcgcctcaccatcacccccgacttcaggtggaatgaccaggtgcatggctcggttgga
gagccgtggtggctgtgggtggaggaccccatcaacgaccacatttatcactcagagtat
ttcctccttcagaagaaacaggtggtgagtgacgagcctcagcaggtggtgttcaccatc
ccgatcttcgagcccatgccatcacagtactacatccgtgctgtgtcagaccgctggcta
ggctctgaagctgtgtgtgtcatcaacttccagcacctcattctacctgaaagacacccc
ccacacacagagctcctggacctacagccgctgcccgtgaccgcgttgggcaacagggag
tatgagagtctatataagttcacccatttcaatcccattcagacgcaaatcttccacaca
ctctaccacactgacaccaacgtgctgctcggagcaccaaccggctcaggaaaaaccatt
gcagcagagatggctatcttccgagttttcaacaagtatcctaccgcaaaggtggtgtac
attgctcctctgaaagcactggtcagggagaggattgaagactggaaagtcaggatagag
gagaagcttgggcggaaggtggtagagctgacgggtgatgtgacaccggacatgcgggcc
atagcgcaggctgatttgattgtcaccactccagagaagtgggatggagtcagccgcagc
tggcagaatcgcagctatgttcagaaagtggccatccttattattgatgaaatccacctg
ctcggggaggacagagggcctgttctggaggtcattgtatctaggacaaatttcatctca
tcccacacctccaagcctgtgcgagtggttgggctgtccacagcgctcgccaacgcacga
gacctcgcagactggctgggcatcggacaggtgggattgtttaatttccggccttcggtt
cgtccagtcccattggaggtacacatacaaggcttccctgggcagcactactgtcctcgc
atggccagcatgaacaaacccacctttcaagccatccgcagccattcccctgccaagcct
gtcctgatatttgtgtcatctcgacggcagacgcgtctcactgcgctcgacctgatcgcc
tttttggctacagaggatgacccgaaacagtggttacaccaggatgagagagagatgaca
gatatcattgccacagtgagggattcaaatctcaagctgacccttgcctttggcattggt
ttgcatcacgctggtctgcacgagagagacaggaagactgtggaagagctgttcgtcaac
tgcaagattcaggtgttaatcgccactagtacactggcctggggtgtgaattttccagcc
catttggtgattgtgaaaggaacggagtactatgatgggaaaacacaccgttatgtggat
tacccaattacagatgttctacagatgatggggagggcaggtagaccgcaatttgatgac
cagggcaaagcggtcatccttgtacatgacatcaagaaagatttctacaagaagttcctc
tatgagcccttccctgtcgagtccagcttgcttggtgttctggctgatcacttgaatgca
gaggtagctgcaggaactattgcttccaagcaggatgccatggattacatcacctggacc
tacttcttccgccggctggtcatgaaccccagctactacaatttagatgacatcacccac
gagactataaacaagtacctgtccaatttggtggaaagaagcctcagagatctggaatgt
tcttactgtatggaaatacaagaggatgagcgcaccatcgaacctctcacgtatggccgc
attgcctcatattattacctgaaacaccagactgttcgcatgttcaaggagagactaaag
ccggagcttcccatccaggagctgctgtccatcctcacagatgcagaagaatatgccgaa
ctgccagtgcgccataacgaagatcagctgaacagcgagctagcccagcggcttcccctg
caggtcaatccgcactcgtacgacagcgcccacaccaagaccaacctgctgttgcaggcc
cacttcagccgagcccagctgccctgcagtgattacagcacagacacaaagaccgtcctg
gacaacgccatccgcatctgtcaggccatgttggacgtggtggcgaatgagggctggctg
gtgtctgctctgagcatctgtaatctggtacagatgattgttcaggctagatggcttcac
gactcctctctgctcaccctgcctcatatatcccagcagaacctctacctctttgggaaa
tggcgctccaaaggtgggaagggtggaaccagaggttatcaaggcccaatcgaagggctt
cctgagctcatagctgcctgtgatggaagagaggagatctttacagccatggtgaaggag
gagtttgagccccatcagatcactcagatatgggcttttttaagtcacttgcccgtactg
gaggtcagtttgagtgtgaagggctggtgggaaggctgtgaggaacagactgagcgtgct
ctgtccaccagggtaaccaacatcagggagcagagcagctggctgcccgtgcacgctgac
caggaatatgtgctccaagtgtccctgcagcgtctcaatgccggccagcagagaaggagg
caggacagcaaggctcaggccccgcgtttccccaagcccaaagatgagggttggttcctg
gtgctgggcgaggtagacaagagggagcttctggccatcaaacgagtgggatacatccgc
aaccggaacgtgacatcagtagccttctacacacctgaacagactgggaagtgtatctac
acactctatctgatgagcgacagttacctgggcttggatcagcagtacgacatccacctg
aatgtgattcctgccagcatcgctgcccaggtcaatgccgaggtcactgatggcatgagc
aacatgaacttgaagtga
DBGET
integrated database retrieval system
