Pangasianodon hypophthalmus (striped catfish): 113533897
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Entry
113533897 CDS
T05759
Symbol
prpf31
Name
(RefSeq) LOW QUALITY PROTEIN: U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113533897 (prpf31)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phyp03041
]
113533897 (prpf31)
Spliceosome [BR:
phyp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
113533897 (prpf31)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
113533897
NCBI-ProteinID:
XP_026782134
LinkDB
All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MSLADELLADLEEAGEEGEDGLYPGGEEDQSDGETANREGHGGLEDIPEEMETDYSSTEC
VTSIAKLRNSKSFAEIMDKIAQYVGNPRKSTDVSGPVEADPEYRLIVAANNLTVEIDNEL
NIIHKFVRDKYSKRFPELESLVPNTLDYIRTVKELGNNLDKCKNNETLQQILTNATIMVV
SVTASTTQGALLAEDELQRLEEACDMALELNQSKHRIYEYVESRMSFIAPNLSIIVGAST
AAKIMGIAGGLTNLSKMPACNLMLLGAQKRTLSGFSSTSLLPHTGYIYHCDVVQSLPPVS
THTHTXHTHTXFDKWQEPPPVKQVKPLPAPLDAPRTKRGGRRYRKMKERLGLTEIRKHAN
RMTFAEIEDDAYQEDLGFSLGQLGKSGSGRVRQAQVNDATKARISKSLQRTLQKQSMTYG
GKSTVRDRSSGTSSSVAFTPLQGLEIVNPQAAEKKVAEANQKYFSNMAEFLKVKKEGGAK
A
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtctttagcagacgaactcttggctgatttggaggaagctggagaggaaggagaggat
ggactgtatccgggtggagaagaagaccagagtgatggagaaactgcaaacagagaggga
catggaggactggaggacattccagaggagatggagacggactacagcagcacggagtgt
gtgacttctatagcgaaactgcgcaacagcaaatcatttgctgagatcatggataagatt
gcgcagtacgtagggaatccacgcaaatccacagacgtctccgggccggtggaggccgat
cccgagtatcgcctcatcgtcgctgctaacaacctcacagtggagatcgataatgaactg
aatattattcataagtttgtgcgtgataaatactcaaagagattcccggagctggagtcg
ctggtgccgaacacgctggattacatcaggactgtcaaggagctggggaacaacctggac
aagtgtaagaacaatgaaacgctgcagcagattctgaccaacgccaccatcatggtggtc
agtgttactgcctccaccacacagggtgcactactggcagaggatgagcttcagcgcctg
gaggaggcgtgtgacatggcactcgagcttaaccaatcaaaacacaggatctacgaatac
gtcgagtcgaggatgtccttcattgctcctaatctgtccatcatcgtcggagcctcgaca
gccgccaagatcatgggaatcgcgggcggcctgacgaacctttcgaagatgccggcgtgt
aacttaatgctgctgggagcgcagaagagaacactgtctggcttcagcagcacgtcacta
ctccctcacacaggctacatctaccactgcgacgtcgttcagtccctccctccagttagt
acacacacacacacancacacacacacacacantttgataagtggcaggagcctccaccc
gtcaaacaggtgaagcccctccccgccccactcgatgctccgaggacgaagagaggaggc
aggaggtatcgtaagatgaaggagcgattgggactcacagagatcagaaaacatgcaaac
agaatgacattcgctgagattgaagacgacgcgtatcaggaggatctgggcttcagcttg
gggcagctgggtaaatcgggcagcggcagggtgagacaggcgcaggttaatgacgccacc
aaagctcgcatctccaaatccctgcagcggacgttgcagaagcagagcatgacgtacgga
gggaagtccaccgtcagagacaggtcttcaggaacaagctccagtgtggcattcactcca
ttacagggtttggagatcgtcaatccgcaggctgcagagaagaaagtggcagaagccaac
cagaaatatttctccaacatggccgagttcctcaaggtcaagaaagagggaggagccaaa
gcgtga
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