Pangasianodon hypophthalmus (striped catfish): 113533955
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Entry
113533955 CDS
T05759
Name
(RefSeq) ras and Rab interactor 3-like
KO
K23687
Ras and Rab interactor 2/3
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113533955
Membrane trafficking [BR:
phyp04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
113533955
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIN1
VPS9
RA
RA_3
SH2
RA_2
TUG-UBL1
Motif
Other DBs
NCBI-GeneID:
113533955
NCBI-ProteinID:
XP_026782271
LinkDB
All DBs
Position
Unknown
AA seq
1072 aa
AA seq
DB search
MMSSATATSPTVIPKPTTPSSLLSDCSSSPTSTTPVHLVDISVNPAPLNPQKSTSPPLPL
SPPSSIRKPQSSQPPLNSKPSVPPHHKTKAPKPTCPPLPAQQPSAIPKASSTAMSKAPPR
PSSKPLSQPLQRPPPPLTAKTPAVPSPPVQTKKSAHPSISILEKLIKTCPVWLQLGMSKE
RATRVLNKELPGIFLVRRDRGQSLMVVSVRLPDQKGVPQIQDLHVKEERAMLYLEGSVLV
FDNIFKLIAFYCVSRDILPFTLKLPQAIIQAIKYEDMEVISTLGVEFWGSELNSHIREDL
SKSADRSVSGEIKCPSGNEHLWYVNPIFIEEYYNSLPPNSPTPILRSQSLNMPVQALPKF
KRPPPLPPRPLTVSEDALTQVSTKVDREKFTSEEASLLLLSSPLPVVQKEEGSHCGYKKA
EGTLLSSSEAETSNKQDAAQPCLIEATKQGTGALSHKIPPVPLRRRISESQPSGEEVQPE
ALKETVCASVAAETNEDPSAAVSLICLDDSSMDQWVSGQSGQSKTPQEEDLGDQSKISNG
DSTVNMLPVIDLKKPGAPVPPPRKKRMSQITTTISQDASNNSEGVTQELIHITPQPTPTL
QNLCVNADHPKVPDVSLFAPEGGAPQPDHDSYSTSSTEEEAEPTSMGALVKRSPTVMLDR
AKQRLSMVNFSTVFTSFMCTDRKLQKRIVELARDGSTYFGNLVQDYRAFTLDTMRRHSSS
TEMLQEIRQMMTQLKSYLIQSTELQTLQEPAIYSEEKLEIIIEASLYKSVLKPLREAVYN
GLRDIHSRAGTLKKLKENQQIVLGTTTTDLGVTTCVPDSPVMEKIQAKLGNLHQEYSPQK
KIDLLLKTCKIIYESMSVGCPGKPHGADDFLPVLMYVLARCNMTALLLDVEYMMELMDPA
LQLGEGSYYLTTTYGALEHIKNYDKQAASRQLSLEIQDSIHRWERRRTLNKARASQSSIQ
DFITVSFLEACSNTKTLGVDPNTTAQDLSAQCAEKFGVMEPDSYCLSVLVDGHYRPLAPE
ELPLSIKSSLHHSEPRKEYYFVYQHGRWPGQEPDKQRTHTPEPTPAKEESLI
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcctcggctactgccacatcacctactgtcatccccaaacctacaactccgtct
tctttgctttccgactgttcttcctcaccaacatccacaacaccggtccacttggttgac
atttcagttaacccagctccactaaatccccaaaagtccacctcccctcctctgcctctc
tcgcctccttcctcaattcgaaaaccccaaagttctcagccacctctcaactccaaacct
tctgtccctcctcatcacaaaacaaaggctcctaagcccacatgcccacctcttccagca
cagcagccttcagcaatccccaaagcatcctcaacagccatgtccaaagcccctccacgg
ccaagttctaaacccttatcacaacctcttcagagaccccccccgccactcactgcaaaa
actcccgctgtaccatccccacctgtccaaaccaagaaatcagcccatcccagcattagc
atcttggagaagctgatcaagacatgtccagtgtggctacagttgggaatgtccaaggaa
agagctacccgtgtactcaacaaggagctgcctgggatctttttagtgaggagagaccgg
ggccagtcgctgatggtagtgtcagttcgtcttccagaccagaagggagttccccagatc
caggacttgcatgtgaaagaagaaagggcgatgctgtatcttgaaggttctgtcctggtc
tttgacaacatatttaaactcattgcattctactgtgttagccgggacatcctccccttt
accctgaaattacctcaggccatcatccaggcaattaaatatgaagacatggaggtgatc
tccacactaggagtagaattctggggctcagagctaaatagtcacattcgggaagatctg
agtaaatctgcagaccgcagtgtctccggagagattaagtgtccctctggaaatgaacat
ctttggtacgtcaaccccatcttcattgaggaatactataacagtctgcctcccaactct
cctacacctatcctgaggtcccaaagcctcaacatgcctgttcaggctctgccaaaattc
aagaggcccccaccactaccaccacgtccactcacagtttccgaagatgcactgacgcaa
gtgtcaaccaaggtggacagagagaagtttacgtcagaggaggcttcacttctcttgcta
agttctcctctgcctgttgtgcaaaaagaggaaggaagtcattgtgggtataaaaaggca
gaaggaactctattatccagttctgaggcagaaacgtcaaacaaacaagatgcagcacaa
ccatgcctgattgaagcaacaaaacagggtactggtgccctttcccacaagattccccca
gtcccactccgacgccggatttcagagagccaaccctcaggagaagaagtccagccggaa
gctttaaaggaaactgtctgtgcatctgtagcagcagagaccaatgaggaccctagtgct
gctgtgtctcttatttgccttgatgacagtagcatggaccaatgggtgagtggacagtct
ggacaatctaaaacaccacaagaagaagatctgggtgatcaatcaaaaatttcaaatgga
gattccactgtgaatatgcttccagtaattgacttaaagaagcctggtgctccagtgcca
cctcctaggaaaaaacgtatgtctcagatcacgacaactatttcccaagatgccagcaat
aactctgaaggtgttacccaagagctcatccacatcactccacagcccactccaacgctc
cagaacctttgtgtcaatgcagaccaccccaaagttccggatgtgtcattatttgcccct
gaaggaggtgctccccagccggatcatgactcctactccacgagcagcacagaggaagag
gcagagcctacctcgatgggtgccttagtgaagaggtcacccactgttatgctagaccgt
gctaagcagcggctctccatggtgaacttctccaccgtcttcacaagcttcatgtgtact
gaccgcaagcttcagaaacggattgtggagcttgctagagatgggagcacatactttggt
aacctggtacaggactaccgggcctttacgctggacactatgaggaggcattcctccagt
acagagatgctccaagagatcagacaaatgatgacacagctcaagagctatctgatccaa
agcacagagctgcagactctgcaggagccagctatttattctgaggagaaactggagata
atcattgaggcatcactttataagagtgttctgaagcccttaagagaggcagtatataat
gggctgagggacatccactcccgtgcaggcactctgaagaagctcaaggaaaatcagcag
atagtcctgggcaccaccaccacagatttgggtgtgaccacttgtgttcctgactcacct
gtcatggagaagatccaagcgaagttaggaaacttgcatcaggaatactcacctcagaag
aaaatcgacctgctcctcaagacatgcaagatcatatatgagtccatgtctgtgggctgc
ccaggaaagcctcatggtgcagacgacttcctgcctgtactgatgtatgtactggctcgt
tgcaacatgactgcactgctgctggatgtggagtatatgatggaactgatggaccctgca
ctacagcttggagaaggctcatactatctcaccaccacatacggagctctggagcatatc
aaaaactatgataagcaggcagcttccaggcagctgagtttggaaatccaggactctatt
catcggtgggagcgtcgccgcactcttaataaggcccgtgcctcacagtcttccatacag
gattttatcactgtctctttcttggaggcatgttctaacaccaagactctgggggtggat
cccaacaccactgctcaggacctgagtgcccagtgtgcagagaagtttggtgtaatggag
cctgactcctactgtctgagtgtgctagtggacggccactaccgacccctggctcctgag
gagttaccactctctatcaaatccagcctgcaccacagtgagccacgcaaagaatattac
tttgtgtaccagcatggacgctggccaggacaggaacctgacaagcaaagaacgcatacc
cctgaaccaacacctgccaaggaggagagtttgatctga
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integrated database retrieval system
