Pangasianodon hypophthalmus (striped catfish): 113533971
Help
Entry
113533971 CDS
T05759
Symbol
nop2
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phyp03009
]
113533971 (nop2)
Enzymes [BR:
phyp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
113533971 (nop2)
Ribosome biogenesis [BR:
phyp03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
113533971 (nop2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
Methyltransf_31
PCMT
FtsJ
Methyltransf_25
Motif
Other DBs
NCBI-GeneID:
113533971
NCBI-ProteinID:
XP_026782303
LinkDB
All DBs
Position
Unknown
AA seq
754 aa
AA seq
DB search
MGRKFDPTTKVKRGPGRKARKQKGAETELTKLLVDEDEPKKLSSRARKRAVKRAQGATAH
TEEKQPKKGFSDDNSEWLTPAKRKRKIDHSEGDEDSDSQWEEVEDDDDEVEDIEEGEKEQ
VEADDDDDDDDDMVDDYGAMEDSSEGEEQEEAGSDGEELLPIERAARKQKKRQEAAEQES
EDEDDDDEEEEEEEDEKMDDDEEEEEEEEDTVQANIDHMDRFKLPNAKEREKEGLLPLDL
QSIHQRIKDNVDVLSHFSEKREEGRERAEYLSLLKSDLCTYYSYNDFLMSNLMELFPLAE
LIDFLEANEVQRPVTIRTNTLKTRRRDLAQALINRGVNLDPLGKWSKVGLVIFDSSVPIG
ATPEYLAGHYMLQGASSLLPVMALSPQEGESVLDMSAAPGGKTTYMAQLMRNTGVIVAND
ASAERLKSVVGNIHRLGITNTIICNYDGRQFPKVMGGFDRVLLDAPCSGTGVISKDPAVK
TSKDNSDILRSAHLQKELILAAIDSVNADSQTGGYLVYCTCSITVEENEWVVDYALKKRN
VKLVPTGLDFGKEGFTRFKERRFHPSLKLSRRFYPHSHNMDGFFVAKLKKFSNTIPTAPA
EENENASKTETPATSEDKNSKPESKQQSKGTQGKARETKQQSKPTSNSKTESPIAKKKPV
VKGKKLKDEGPKKKLAKMDEQNSKEVKTKEKLKVLKVDKDITNESVTVKAEGSLLKKKTN
KKNQKNLFQRRKNKMGKNKFKKLKNVLKQQEAGQ
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggggaggaagtttgatcccaccaccaaggtgaagcgtggacctggacggaaagccagg
aagcagaaaggcgcagagaccgagctgaccaagcttttagtggatgaggatgagcctaaa
aaactgtctagcagagccagaaaacgtgctgtgaagagagcacagggggccactgcacac
acggaagaaaaacagcccaagaaaggattctctgatgacaacagcgaatggctgacacca
gcaaagcgaaagcgcaaaattgaccattcagaaggggacgaggacagcgacagccagtgg
gaggaagtggaagatgatgatgatgaagtagaggatatagaggaaggagaaaaagaacaa
gttgaggcagatgatgatgatgatgacgacgatgatatggtcgatgactatggagcgatg
gaagatagcagtgaaggagaagaacaggaggaggcaggcagtgatggagaggagctgcta
cctattgaacgagctgccaggaaacagaaaaaacgtcaggaagccgcagaacaggagagt
gaagacgaggatgatgatgatgaggaggaggaggaggaggaagatgaaaaaatggatgat
gatgaggaggaggaggaggaagaagaggacacagtgcaggcgaatattgaccacatggac
aggtttaaactgcctaatgcaaaggagcgagagaaggagggacttttgcctctagacctg
cagagcatccaccagaggatcaaagacaacgtggatgtgctctcccacttcagtgagaag
agagaggaggggagggagcgagcagagtacctctcgctgctgaagtcagatctctgcacg
tactacagctacaacgacttcctcatgagcaatctcatggagctgtttccactcgctgag
ctcatagattttctggaggccaatgaagttcagagacctgtcaccattaggaccaacacc
cttaaaaccaggaggagagacttggctcaggctctgatcaataggggtgtaaatctggat
cctttggggaagtggtctaaagtgggcctggtcatctttgattcctccgttcccataggt
gcaactcctgagtatctagctgggcactacatgctgcagggagcttcgtcactgctccct
gtaatggcgctctctccccaggagggggagtctgttctggacatgagtgcggctcctggg
ggaaagaccacatatatggcccagctgatgagaaacacaggagtgatagttgctaacgat
gccagtgctgagaggttgaaaagtgttgtgggaaacatccatcgcctgggaatcaccaac
accatcatctgtaactatgatggcagacagtttcccaaggtgatgggaggttttgacaga
gtgttgttggacgctccttgctcaggtacaggggtcatctccaaagatccagcagtgaaa
actagcaaggacaattccgatattctgcgctcagctcatctacagaaggagctgattctg
gctgccatcgactcagtcaatgctgactctcagacgggtggttatcttgtctactgcacc
tgctctattacggtggaagagaacgagtgggttgtggattatgccctaaagaagagaaat
gtaaaactggttcccacaggattggactttggcaaagaaggcttcaccagatttaaagag
cgacgtttccacccttcacttaagctgtctcgaaggttctacccacattcccacaacatg
gatggcttctttgtggcaaagctgaagaagttctctaacaccattcccactgcacccgca
gaagagaacgaaaacgccagcaaaacagaaacacctgctacatcagaggacaaaaactcg
aaaccagagtctaagcaacagagcaaaggtacacaaggaaaagccagagagactaagcaa
caatcaaaaccaactagcaacagcaaaaccgaaagccccattgccaagaaaaagccagtg
gtaaaaggtaaaaaattaaaggatgaaggtcccaaaaagaaattggcgaaaatggatgaa
cagaattcaaaggaagtcaagaccaaagaaaagctcaaagtcctaaaagtggacaaagac
ataacaaatgagtctgtgactgtgaaagcagagggaagcttgcttaagaagaagacaaac
aaaaagaatcagaagaatctctttcaaagaaggaagaataaaatggggaaaaacaaattt
aagaagttaaaaaatgtgctgaagcaacaggaggctggacagtag
DBGET
integrated database retrieval system
