Pangasianodon hypophthalmus (striped catfish): 113534002
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Entry
113534002 CDS
T05759
Symbol
trdmt1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phyp03016
]
113534002 (trdmt1)
Enzymes [BR:
phyp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
113534002 (trdmt1)
Transfer RNA biogenesis [BR:
phyp03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
113534002 (trdmt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_methylase
MTS
Motif
Other DBs
NCBI-GeneID:
113534002
NCBI-ProteinID:
XP_026782358
LinkDB
All DBs
Position
Unknown
AA seq
384 aa
AA seq
DB search
MEKLRVLELYSGIGGMHYALRESSVPSEVVAAVDVNTTANEVYKHNFPNTLLLPKTIEGM
TLSDFNKLDFDMILMSPPCQPFTRIGLQGDVNDPRTKSFLYILDILPRLNKMPRFILLEN
VKGFETSSARNALIKTLQDCRYNFQELMISPTCLGIPNSRLRYFLVAKAPPDSFSFQKTA
EILEGFPKSESSNDTDSPMIPDSHCSTVNGDLREDGTIIYKMETAQELERKRSQDNEQTV
RRLQDFLEEEEQGTDMDSYLLPPKILLRYALLMDIVNPNCRRSVCFTKGYGHYVEGTGSV
LQSCTDVELESIFKSLDVLSEEEKLEQLSRLKLRYFIPREIANLMGFPPHFSFPSNISIK
QQYRVLGNSLNVHVVAKLISLMVS
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggagaagctccgtgttttggaactgtacagtggcattggagggatgcattatgcattg
cgagagagctccgtcccctctgaagtggtagccgcagtggacgtgaacacgacggccaat
gaagtctataagcacaacttcccaaatactctacttctacccaagaccattgaaggaatg
acattaagtgatttcaataaactggactttgatatgattttgatgagccccccttgtcag
ccttttactaggattggattgcagggtgatgtaaacgaccccagaacaaaaagctttctc
tacatcttggacattctgccaaggttgaacaagatgccccgcttcattctgctcgagaat
gtgaaaggctttgagacgtcgtctgcaagaaatgccttaataaagactttgcaagactgt
agatacaactttcaggaattaatgatatcacccacttgtctaggaataccgaactcaagg
ctgcgttattttcttgttgctaaagctcctccagattccttctcatttcagaagacagca
gagattctagagggctttccgaagtcagaatccagcaatgacacagacagtcccatgatc
ccggacagccactgtagtacagtcaatggtgacctgagagaagatgggactataatctat
aagatggagacggctcaggagctggagaggaagaggagtcaggacaacgaacagacagtg
aggagactgcaggatttcctggaagaggaagaacaaggaacagacatggacagttatttg
cttcctccaaagatcctgctcagatatgccttgctcatggacatagtgaatccaaactgc
aggagatcagtctgcttcactaaaggatatgggcactacgtggagggaactggttctgtt
ctgcagtcgtgtacagacgtggagctggagagcatctttaagtcactggacgtgctgtct
gaagaggagaagctggagcagttgtcccggctgaagctcagatacttcatacccagagag
attgccaaccttatgggcttcccaccacatttcagctttccatcaaatatctccattaag
cagcagtaccgggttctgggaaacagtctaaatgttcatgtagtggccaagctcatcagt
ctcatggtgtcatga
DBGET
integrated database retrieval system
