Pangasianodon hypophthalmus (striped catfish): 113534042
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Entry
113534042 CDS
T05759
Name
(RefSeq) protein quaking-A isoform X1
KO
K14945
protein quaking
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phyp03041
]
113534042
Spliceosome [BR:
phyp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
113534042
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STAR_dimer
Quaking_NLS
KH-I_KHDC4-BBP
KH_1
KH_12
KH_KRR1_2nd
Ribosomal_L12_N
KH_PNO1_2nd
Motif
Other DBs
NCBI-GeneID:
113534042
NCBI-ProteinID:
XP_026782420
LinkDB
All DBs
Position
Unknown
AA seq
383 aa
AA seq
DB search
MMVGEIEVKERPRPSPDYLMQLLNEKKLMTSLPNLCGIFTHLERLLDEEINRVRKDMYND
TVSGLVDKHPLELPEAHGPIVHLQEKLFVPVKEYPDYNFVGRILGPRGLTAKQLEAETGC
KIMVRGKSSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDTQARAEIKMRRAVEEVKKLL
VPAAEGEDNLKKMQLMELAILNGTYRDTNVKAPNLAFSLAAAAAAAQGPRLIAAPAGQVL
PPAALRPPTPAGTPIMNLIRPAQMPAMLPNATPTLVPPAPDAGIIYATPYDYPYALAPTS
LLEYPIEHGGVLGKRAWGLGASGFGGHQDGTAATFYGGSLDMTMPSPAQDLVQGAMATKV
RRHDSRVHPYQRIVTADRAATGN
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgatggtcggggagatcgaagtgaaggagagaccgaggccgagtcctgactatctgatg
cagttactgaacgaaaagaagctcatgaccagtctgccgaacctgtgcggcatcttcaca
cacctcgaaagactgctggatgaagagataaacagagtgcggaaggacatgtacaatgac
acagtgagcggtttggtagacaaacaccctctggagcttcccgaggctcacggtcccatc
gtccatctgcaggagaaactgttcgtccctgttaaagaatatcctgactataatttcgta
ggcaggattctggggccacgaggtctcacagcgaagcagctggaggcggaaaccggctgc
aagatcatggtcagaggaaagagctccatgagggacaaaaagaaggaggagcagaaccga
gggaagccgaactgggagcacctgaacgaggacctgcacgttctcatcacggtggaggac
acacaggcgcgagccgagatcaagatgaggagagccgtggaggaggtgaagaagctcctg
gtgccggcggcggaaggagaagacaaccttaagaagatgcagctgatggagttggccatc
cttaacggaacctacagagacaccaatgttaaagccccgaaccttgcgttctctcttgca
gcggcggccgcagcggctcagggccctcggctgatcgccgcccccgccggtcaggtactt
ccacctgccgctctgcgtcccccgaccccggccggcacgcccatcatgaacctcatccgt
cccgcgcagatgcccgccatgctgcccaacgccaccccgacgctggtgcccccggcgcct
gacgcaggcatcatctacgccacgccctacgactacccgtacgccctggcacccacctct
ctcctggagtaccccatcgagcacggaggcgtcctaggtaagcgggcgtgggggctcggt
gcttcaggctttggcgggcatcaggacggcaccgccgcaacgttttacgggggcagcttg
gacatgacgatgccaagccctgcccaggacttagtccaaggtgcaatggctactaaagtg
cggagacatgactcacgggtccatccttaccaaaggatagtgaccgcagacagagccgcc
accggcaactaa
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