Pangasianodon hypophthalmus (striped catfish): 113534046
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Entry
113534046 CDS
T05759
Name
(RefSeq) ATP-dependent zinc metalloprotease YME1L1-like isoform X1
KO
K08955
ATP-dependent metalloprotease [EC:3.4.24.-]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
phyp01002
]
113534046
Peptidases and inhibitors [BR:
phyp01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
113534046
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
AAA_16
AAA_22
AAA_5
TIP49
RuvB_N
DUF815
Mg_chelatase
IstB_IS21
nSTAND3
AAA_lid_PRS2_C
Zeta_toxin
AAA_17
AAA_33
AAA_14
AAA_7
FAD-SLDH
AAA_28
PhoH
AAA_18
ABC_tran
Motif
Other DBs
NCBI-GeneID:
113534046
NCBI-ProteinID:
XP_026782429
LinkDB
All DBs
Position
Unknown
AA seq
734 aa
AA seq
DB search
MFSLTTSFQPQVTVPLSHIINAVHSLKASASSTATAAVQSLHRELSADHHIVPHTPDTQL
KQIHKDLGISELRLSGVNELLNRLLPTPVPKESLDLRVCLRSSRWRTSHISTDSFFHNKH
GFSQRMPGLFGYPIFHRQNTHPLQVLCSDLQHLKVCVQSRGFKTLRSKTRRLQSSYESPA
ESESYTPLFMKGLLLRDKADAESLDQLMKQRNLPENQQDAFKTGFTEGFMKSQALMQKTQ
DSLKRTRLILLVLLLVGIYGLSRTPFLSGKGSFSDTVRFRTTSGLDAALDPIQMKNVTFE
HVKGVEEAKSELQDIVEFLRNPQKFTALGGKLPKGVLLVGPPGTGKTLLARAVAGEADVP
FYYASGSEFDEMFVGVGASRIRNLFKEAKANAPCVIFIDELDSVGGKRIESPMHPYSRQT
INQLLAEMDGFKPNEGVIVIGATNFAEALDNALVRPGRFDMQVTVPRPDVKGRTEILNWY
LKKIKVDPDVDAEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTIKELEFAKDKILM
GPERRSVEIDKKNKTITAYHESGHAIVAYYTKDAMPINKATIMPRGPTLGHVSMLPENDR
WSETRAQLLAQMDVSMGGRVAEELIFGDENITTGASSDFDGATKIAKMMVTRFGMSDKLG
VMTYSDLSKHSPETQAAVDQEVRTLLQDSYERAKKLLKTYSKEHKKLADALLTYETLDAK
EIQMVLEGKSLDPR
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgttctctctgactacatcttttcagcctcaggtaactgtgccactgagccatattatc
aatgctgtgcactcgctgaaagcgtcagccagctccactgccactgctgcagttcagagt
ctacaccgagagctttcggctgatcaccacatagtgccccacacccctgacacacagctt
aagcaaattcataaagacctggggatctcagagctaaggctaagtggagtcaatgagctg
ttaaacaggctgctgcccacaccagttcccaaagagagcttggaccttagggtctgtctt
cgatcttcaagatggagaacatcacacatctccacagattccttctttcacaacaaacat
ggtttctctcagagaatgccaggactctttggctatccaatattccatagacaaaacacc
catcctcttcaggttctttgctcagatcttcagcacttgaaagtgtgtgtccaaagccga
ggttttaagactctgaggtccaaaaccaggcgccttcagtccagctatgagagtccagca
gaatcggagagctatactccactatttatgaagggtcttctcttgagggataaagctgat
gctgagagccttgaccagttaatgaaacagaggaatcttccagagaatcagcaggatgcc
tttaagactggttttacagagggcttcatgaaatctcaagccctaatgcagaagacacaa
gattcacttaagaggactcgtctgattttacttgtcctcctacttgttggcatctatggt
ttgtcaagaaccccatttctctcgggtaaaggctcgttttctgatactgtccgattccgt
actacatctggcctggatgccgcactggatccaatccaaatgaagaacgtcacctttgag
catgtgaaaggtgtggaggaggcgaagagtgagcttcaggacattgttgagttcttgagg
aatccacagaaattcactgcacttggtggaaagctacccaaaggtgtcctcctggtcggt
cctcctggtactggaaagactcttcttgccagagctgtggcaggggaggcagatgtgcca
ttctactatgcgtcagggtcagagtttgacgagatgtttgtgggcgttggagcaagtcgc
atccggaacctattcaaagaggcaaaagctaatgccccttgtgtgatctttattgatgag
ttggacagtgtgggtggaaagcgcatagagtcacccatgcatccatattcacgtcagact
attaaccagctccttgcagaaatggatgggtttaaaccaaatgaaggggttattgttatt
ggggcaacaaattttgcagaagctttggacaatgctcttgtgagacctgggaggtttgac
atgcaagtcacagtccccagacctgatgtaaaaggacgtactgagatcctcaactggtac
ttgaagaaaatcaaagtggaccctgatgtggatgcagaaattattgccaggggaacagtg
ggcttctctggagcagagctggagaacttggtgaatcaggctgcactaaaggctgccgta
gatggaaaggagatggtgacaataaaggaactagagttcgctaaagacaagatccttatg
ggcccagagcgcagaagtgtggagatcgacaagaaaaacaagacgatcactgcatatcat
gaatctgggcacgctattgtggcatattatactaaagacgccatgcccataaataaagct
actatcatgccacgaggacccacccttggtcatgtgtctatgctcccagaaaatgatcgg
tggagtgagactcgtgctcagctgttggctcagatggatgtcagtatgggtggcagggtg
gcagaggagctcatctttggggatgaaaacatcactacaggagcgtcaagtgatttcgat
ggagccactaagattgcaaagatgatggttacacgctttggaatgagtgacaagctgggt
gtcatgacctactctgacctgtccaaacatagcccagaaacacaagctgctgtggaccag
gaagtcagaacgctgctacaggattcatatgagcgtgctaagaaactcctcaagacatac
agcaaagagcacaaaaaactggcagatgctctgctcacctatgagactctggatgcaaaa
gaaattcagatggttcttgagggcaaatctctagaccccagatga
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