Pangasianodon hypophthalmus (striped catfish): 113534063
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Entry
113534063 CDS
T05759
Symbol
wdr90
Name
(RefSeq) WD repeat-containing protein 90 isoform X1
KO
K24759
WD repeat-containing protein 90
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
phyp03037
]
113534063 (wdr90)
Cilium and associated proteins [BR:
phyp03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
113534063 (wdr90)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CFA20_dom
ANAPC4_WD40
HELP
NBCH_WD40
WDR54
Nup160
Nucleoporin_N
DUF6386
Motif
Other DBs
NCBI-GeneID:
113534063
NCBI-ProteinID:
XP_026782452
LinkDB
All DBs
Position
Unknown
AA seq
1864 aa
AA seq
DB search
MMASKVWQHPYVNIFKHVKLDEWRKASKEGDVTTYMDKTLKCTVFRIRGSVPASNYILIP
KTSSQSLGLTGRYLYLLFRPCPNKHFVVHLDVAAEEGRVIRVSFSNLFKEFKSTATWLQF
PFLCAGAPGSVYESTAKTAKHGLVGPAPEGVRWTCLMMDLRYVLSVYLNRTHSHLKSVKL
CANMAVKNLVTSDLLLDPGLSFSEFRQTGMVLPEGTAPMPRDMCFPVPKGSSWHQLYDYI
RFPSDGAKMPFDSIQKGQGTQASTPQEPLDDKSPYREESRSVGISNPVQDRVSLIQKITT
PKPHAKQRSLLHTSSLPELPTAPSGGVGSPSSTGRRSQSEEEEDGRVVCDDGDSVHVYAH
YEDDDMSSRSTDSDEVAVVNAAVPRSLPLPSAKPAKQQSKLHPDPILKLRRIIGFGGATV
RCAVWARDGEEVVYPCHAIIVSMKVSSGQQRFFIGHTDKVSALALNSSSSLLASAQTGTH
CLVRLWSYSKGEALTIIKTHTHSLHSLSLSCSGGVLCGVGKDSHNKTTVVVWNTQRVLKG
GVVSILAKAHTDVDIQTMKIAFFDDTRMVSCGVGNVRLWRVRGRSLRSCPVNLGQYHSLE
FTDLAFEQGHTPGRQPDERTLFVSSRSGHILEIDYVSVTIQNIRRLLPSQQSHTHSREKQ
TFSTGPGIAVNSISVCSTFCATGSEDGFLRLWPLDFSSVFLEAEHEGPVSLVCVSSDGLS
VLAATKTGNLGYLDVSSRGYRTLMRSHTDTVLGFSVDGTRRQITTASRDGTVRIWDVDSA
QQLYDFVSDDHNDAPSSVAFHPRMPIFACGSSSGTVRIFDIPTASLVAQHRQHRGEVVGL
VFSPDGERLYSAGSLGYLALYNAAQPEYDVLRVLGNMVVRGTDRGPDALAVSSDSKRLAF
VGPTEYIVTVTDAHSLDELLRVDVSVLDVESTTLDSALKVCFSPSSLSHLLITTSANKIL
WINSNTGRLLREVSEVHKDQCASLSVSEDGRYLLTAGHNAVKVWDYNMKLDVKSQVFIGH
SEPIRQVSFTPDQVGVVSVGDAIFFWDFLAHQKEVPSCTLRSPVSAVSPPTAGKDRISSP
PQTVAVKHSEVEFNGGLSSGMPRQAAPLPSSPPPILDMITREKTGHEDSSFLSLTDCVEE
VQPGPDRSPAPRHASFLRVTERGGAAKSDTAPVSQITVEENGEEKKPIRPDCYKHFIPRY
KTTALDPSAVTPPPGQEGLSLKAVIGYNGNGRSNMVWNPDTGLFVYSCGCVVVVENLHNG
SQRHWLGHSEEISTLAVTHDAKTVASASGGGASSKSLICIWNVQDGSRRNSILYHKGSVQ
SLAFSRDDLYFLSVGDFEESRVALWSTHSFELLCSISASVPLHEAVFCPSSASQLAYVGS
SVIFFCYIHTHGRGAELQVQTVGLPEEIGEAEVTSLCYSTNFILYTGMNSGRVCVWDCNT
HRCFMTWEADDGEIGVLLCRGHRLLTGSNSKKLKLWSVAAVQNLRPSNTSSQDCNAQVLL
EQEMVLDGTVVSAAFDDVMDMGIVGTTAGTLWYINWTDNTSIRLISGHKSKVNGVVCSPD
EHHFVTCGADGSVRVWALPSNELLVQFQVLNQSCECVCWSPAAAVCELGTVGHVAGGYSD
GSVRIFSVASAEMELKLQPHHGAVSALQYSHHGHVLLSGGRDGVIAVSSPSSGASLRIIN
DHKGAAVSAIQCTAKQYKEYGLEGNELWLAVSADRRVSIWASDWAKDKCELLDWLTFPAP
APLQDAASLPPSLAAFSPTERGIVVYTGYAAQKELTFYCLKKKQVMRTVSLTDWALSLSL
CFRGRLLAVGSNQRVLKLIDSSSGRFQDFTWHSDSVHHCSFSQSGTQLFTTAHGEVFLWS
LRGL
NT seq
5595 nt
NT seq
+upstream
nt +downstream
nt
atgatggcttccaaagtgtggcagcatccttatgtaaacatatttaagcatgtgaagttg
gatgaatggaggaaggccagcaaagaaggagatgtcacaacttatatggacaagacgctc
aagtgcaccgtgttccgtatccgcggttcggttccggccagcaactacatcctgattccc
aaaaccagcagccagtcgctgggcctcacgggccgctacctgtacctgctcttcagaccc
tgtcccaataaacacttcgtagtgcacttggacgtggctgctgaggagggtcgtgtgatt
cgtgtgtcattctccaacctgttcaaggagtttaaatccacagcgacatggctgcagttc
cccttcctgtgtgcaggtgcacctggctctgtgtacgagagcactgccaagaccgccaaa
cacggtctggtgggtccggctccagagggtgtgcgctggacgtgcctgatgatggacctg
cgttacgtgctttctgtctacctgaacagaacgcacagccacttgaagagcgtcaaactg
tgtgccaacatggccgtaaaaaatctggtcaccagcgacctgctgctggaccccggtctg
tccttttcagaattccggcagacgggcatggtgctgcctgagggcacggcccctatgccc
agagatatgtgctttcctgtgccaaaaggcagcagctggcatcagctctatgactacatc
agattcccctctgacggtgcaaagatgccatttgactccatacagaaaggacagggcact
caagcctcaactccacaagaacctctggatgataaaagtccatatcgagaggagagccgc
agcgtgggcatcagcaatccagtgcaggaccgtgtctccctcatccaaaagatcaccaca
cccaaaccccatgctaagcagcgctcactgctgcacacctccagcctgcctgagctcccc
acagcgccctctggaggtgtaggcagccccagttccacaggtcgtaggtcacagagcgag
gaggaagaggacggcagggtcgtgtgtgatgacggagacagcgtgcatgtgtatgctcac
tacgaggacgatgacatgagcagccgatcaacagatagcgatgaagtggcagtggtcaac
gcagctgttcctcgttcacttcctctgccttcagctaaaccagcaaagcagcaaagtaag
ttgcaccctgaccctatactgaagctgagaagaatcattgggtttggtggagcaacagtg
agatgtgctgtgtgggctcgtgacggagaagaggtggtgtatccgtgtcacgccatcatc
gtcagtatgaaggtctcatctggtcaacagcgctttttcatcggccacactgataaagtg
tcagctctggctctgaactccagctcgtctctgttggcgtcggctcagacaggaacacac
tgcctggtccggctctggagctatagcaagggagaggcgctgactattattaaaacacac
acacactcgctgcactcactcagtttgtcctgtagcggcggggttctgtgtggagtgggc
aaagacagccataacaaaactacagttgtggtatggaacacacagcgcgttctcaaaggg
ggtgttgtctcaattctggctaaagctcacacagatgtcgacatccagaccatgaagata
gcctttttcgatgacacacgcatggtatcctgcggcgtgggtaatgtgcgcttatggcgt
gtgcgcggccgctctttgcgctcatgccccgttaacctgggacagtatcacagcctggag
tttaccgacctggcctttgagcagggacacactccgggacgacagccggacgagcgcacc
ctctttgtgagcagtagaagtggccacatactggagattgactatgtctcagtgactatt
cagaacatcaggaggctcctcccatctcagcaaagccacacccacagcagagagaagcag
accttcagtactgggccaggtattgcagtgaacagtatcagtgtgtgcagcacattctgt
gcaacaggctcagaggatggcttcctgcgtctctggcctctcgatttctcctctgtcttc
ctggaggcggaacacgaagggccagttagtctggtgtgtgtttcttctgatggtctgagc
gtcctggcagccaccaaaacaggaaacctcggctatctggacgtcagtagtcgtggttac
cgcacactgatgaggtcacacacggacacagtgttgggcttcagtgtggacggaacccgg
cgccagatcaccacggcatcccgtgacggcaccgtccgtatctgggacgtggactccgct
cagcagctgtatgactttgtatctgatgatcataatgatgccccgtcctcagtggcgttc
catcccaggatgcccatctttgcctgtggttccagctctgggaccgtcagaatttttgac
atccccacagccagcttagtagcccaacacagacagcaccggggtgaagtggtgggcctg
gtgttttctccagacggtgaacgcctctacagcgctggctctctgggatacctcgctctc
tataacgctgcccaaccggaatatgacgtcctccgcgtgctaggtaacatggttgtgcga
ggtacagatcgaggcccggatgctttggctgtgagttcggatagtaaacgcctggcgttt
gttggtcccacagaatacatcgtaaccgtcacggatgcgcattcgctcgatgagttatta
cgtgtggatgtgagcgtattagatgttgagagcacaacactggattcggcgttaaaggtg
tgtttctccccgtcctccctgtcccacctgctcatcaccacttcggccaataagatcctg
tggatcaacagtaacacaggaaggctactgagagaggtatctgaggtgcacaaggatcag
tgcgcatctttgtccgtcagtgaagatggacgctacctgctcactgctggacacaacgca
gtgaaggtctgggactacaacatgaaactggatgtcaagtcgcaggtattcatcggtcac
tcagagcccattagacaggtgagcttcacccctgaccaggtgggcgtggtttcagtgggt
gacgccatctttttctgggacttcctggctcatcaaaaggaagtgccttcctgcactctc
agatcaccagtatccgccgtctctcctcctacagcagggaaagaccggattagctctcct
cctcagacagtggctgtgaaacacagtgaggtggagtttaatggaggattgtccagcgga
atgccacgacaggcggcacctcttccttcctcgcctccgcccattttagacatgatcacc
agagagaagacggggcatgaggattcatctttcctgtcactcactgattgcgttgaagag
gtgcaacccggccccgaccgttcccctgctcctagacacgcctctttcctgcgtgtcact
gaaaggggcggagccgcaaaatcagacactgctccagtcagtcagatcacggtggaggaa
aatggagaggagaagaagccgatccgtccagactgttacaaacacttcatacctcgttac
aaaacaactgcacttgacccgagtgctgtaactccacctccaggacaagaaggccttagc
ctcaaagctgtgattggttacaatggcaatgggcggagcaacatggtctggaatccagac
acaggtctgtttgtgtactcttgcgggtgtgtggtggtggtggagaatctccacaacggt
tcacagagacactggctcggccacagcgaggagatctcaacccttgccgtaacacacgac
gcaaagacagtggcctctgcgtcaggaggtggggcatcttccaagagcctcatttgcata
tggaacgttcaagacgggtcacgcagaaatagcattttgtaccacaagggctcagtgcag
agtctggctttctctagagacgacctctactttctgtccgtaggtgattttgaggagtcg
agagtggcactgtggagcacacactcgtttgagttgctctgttcgatcagtgcgagcgtc
ccactgcacgaggcggtgttctgccccagcagtgctagtcaactggcgtacgtcggctcc
agtgtcatctttttctgctacatacacacacatggccgtggagcggagctacaggtccaa
accgtgggtttgccagaggagatcggtgaggctgaggtcacatcactttgttacagcact
aacttcatcctgtataccgggatgaacagtgggcgtgtgtgtgtgtgggactgcaacaca
caccgctgcttcatgacctgggaggctgacgatggcgaaatcggcgtgttgctgtgtcgt
ggtcacaggctgcttactggcagtaacagtaagaagttaaaactgtggtcagtggctgca
gtgcaaaatctcagaccttcgaacaccagcagccaggactgcaacgctcaggtgctgcta
gagcaggagatggtgctggacggcacagtggtgagcgcagcatttgatgatgtcatggac
atgggaattgtgggtacaactgcaggaacgctgtggtacataaactggacagacaacacc
agtatacgcttaatcagtggccataagagcaaggtgaacggcgtggtatgtagtccagac
gagcatcactttgttacctgcggggcggatggtagcgtaagagtgtgggcgttgcctagc
aacgagctgctggtccagtttcaggtgctcaaccagagctgtgagtgtgtgtgttggagc
ccagcagcagcagtgtgtgagcttggcacagtcgggcacgtggccggaggctacagcgac
ggctccgtgcggatcttcagcgtagcttcagctgagatggagctgaaactgcagcctcac
cacggcgctgtgagcgcactgcagtactcacaccacggtcacgtgctgctttcaggagga
cgagacggcgtcattgcagtgagcagcccatcaagtggagcctccttacgcatcatcaat
gaccacaagggggcggcggtcagcgctatacagtgcacagccaagcagtataaagagtac
ggtctggagggcaacgagctctggctggctgtcagcgccgaccgccgcgtcagcatctgg
gcatccgattgggcaaaggacaaatgcgagctgctggattggctgacatttcctgctccc
gcccctcttcaggacgcagcgagcttgccgcccagtctggcagcgttcagccccacagag
aggggaatagtggtttacacggggtatgctgctcagaaagaactcaccttctactgcctg
aaaaagaaacaggtgatgaggacggtgtctctcactgactgggctctgtctctcagtctg
tgttttagaggaagacttctcgctgtcggatcaaaccagcgtgtgctgaagctgatcgac
tcctccagcggccgttttcaggatttcacgtggcacagcgactccgttcaccactgcagt
ttcagccagtcaggaactcagctgttcactacagcacatggagaggtcttcctgtggagc
ctaagaggcctgtga
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integrated database retrieval system
