Pangasianodon hypophthalmus (striped catfish): 113534065
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Entry
113534065 CDS
T05759
Symbol
rhbdl1
Name
(RefSeq) rhomboid-related protein 1 isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
phyp01002
]
113534065 (rhbdl1)
Enzymes [BR:
phyp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
113534065 (rhbdl1)
Peptidases and inhibitors [BR:
phyp01002
]
Serine peptidases
Family S54: Rhomboid family
113534065 (rhbdl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rhomboid
DUF5580_M
EF-hand_7
DUF5580
Motif
Other DBs
NCBI-GeneID:
113534065
NCBI-ProteinID:
XP_026782457
LinkDB
All DBs
Position
Unknown
AA seq
372 aa
AA seq
DB search
MDRSSLFQLIQEQLDPEQTGFIAVENFTSLAEQHELQLDPNKLDMLLALVQSDQHGHVCY
QELIELLNSKRSSSFRRAIANGRRTLQREILLDETGLGVYKRFVRYVAYEILPCETDRRW
YFHQNRLCPPPVFMAIVTIVQIVVFMCYGVRLNKWVLQTYQPDFMKSPLVYHPGHRAQVW
RFFSYMFMHVGLEQLGFNALLQLMIGVPLEMVHGILRISLLYMAGVVAGSLTVSITDMRA
PVVGGSGGVYALCSAHLANVVMNWAGMKCPYKLLRMILALVCMSSEVGRAVWLRFSPPLP
SSGPQPSFMAHLSGAVVGISMGLLILRSYEESLHKQCSWWVLVFSFVTFLLFAIFWNIFA
YELLGVQIPPPP
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggataggagctcactgtttcagctcattcaggagcagctggaccccgagcagactggt
ttcattgcggtggagaacttcaccagtctggcggagcagcatgagctgcagctggacccc
aacaagctggacatgctgctggccctcgttcagagcgaccagcacggccatgtctgctac
caggagctcatcgagctgctaaacagtaagcgctccagtagtttccggcgcgccatcgct
aatggacggcgcactctgcagcgcgagatcctattggacgagacgggcctgggcgtgtac
aagcgctttgtgcgctatgtggcatacgagatcctcccatgtgagacggacagacgttgg
tactttcatcagaacaggctctgtcctccgcctgtcttcatggccatcgtcaccatagtg
cagattgtggtgtttatgtgttatggggtgaggctcaacaagtgggtcctgcagacatat
cagccagactttatgaagagcccactggtgtatcatccaggacaccgagcccaagtctgg
agattcttcagctacatgttcatgcatgttgggttggagcagctgggctttaatgcgcta
ctccagttgatgatcggcgttcctctggagatggtgcatggaattctgagaatcagcctt
ctttatatggcaggagtggtggcaggttctctcaccgtctccatcactgatatgcgtgct
ccggtggtcggtggctctggaggagtctacgcactctgctctgcccatcttgccaacgtc
gtcatgaactgggccgggatgaagtgtccgtacaagttactgcggatgatcctcgcgctg
gtttgcatgagttcagaggtgggccgagccgtgtggctgcgcttctcgccgccgttgccc
tcgtcagggccgcagccgagcttcatggcccacctgtcaggtgccgtggtgggtatcagc
atgggcctgcttatcctgcgcagctatgaggagtcgctgcacaagcagtgctcatggtgg
gtcctcgtcttctccttcgtcaccttcctactcttcgccatcttctggaacatcttcgcc
tacgagctgttaggagtccagattccgcctccgccctga
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