Pangasianodon hypophthalmus (striped catfish): 113534089
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Entry
113534089 CDS
T05759
Name
(RefSeq) LOW QUALITY PROTEIN: iroquois-class homeodomain protein irx-4-A-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113534089
Transcription factors [BR:
phyp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
113534089
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
113534089
NCBI-ProteinID:
XP_026782489
LinkDB
All DBs
Position
Unknown
AA seq
467 aa
AA seq
DB search
MHAGAQLHRSPLIPAARGSSAMSYPQLGYPYSSAPQFLMPTNSLTSCCESRARSVSESGS
CAXXXXXXXPPQAPVYCPVYESRLLATARHELGVYSNPYAGGQGYGNYVTYGTEASAFYS
LGAFDAKDSAASASITQAAAAAYYPYDPTLGQYQYDRYGSMDGGTRRKNATRETTSTLKA
WLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRNKGSDEKR
CGDDDDGSQEEQIKSDTNDDESRSRDDKDLQLSDLDDFDAIESESSECDIKHQFHVNAHM
NTLPEHLKETSLKLPSLEGDALKLPSIRTSLERDTDLPKSCLKTPSRDCEHNPSGNTKIC
FQQDHQTLDSKPRIWSLAQTATSLNPTEYSSCMLRCQPVIPSSSSPPVKVPEKQQDSPVT
TLRHWMDGVFHDPLFKHSTLDQAHNSNTAGSWTTTKGSILESGAQRD
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgcatgctggtgcacagctgcaccgctctccactcattcctgcagccaggggatcatct
gcgatgtcctacccacagctcggatatccctactcctctgctccacagttcctcatgccc
accaactctctgacgtcgtgctgcgagtcgcgtgcacgctccgtgtccgagtctggctcg
tgcgcnnnnnnnnnnnnnnnnnnnnccccaccccaggctccggtttactgccccgtgtac
gagagcaggctgctggccaccgcgcgccacgagctcggggtctacagcaacccgtacgct
ggtggacagggctacggaaattacgtcacatacggcaccgaggcctctgcgttttactct
ctgggtgccttcgatgctaaagacagcgcggcctctgcgagcatcacccaggctgcggct
gctgcttactacccctacgatcccactctggggcagtaccaatatgacagatatggctcg
atggacggaggcacgaggaggaagaacgccacgcgcgagaccacgagcacgctgaaggcc
tggctgcaggagcaccggaagaacccgtatcccaccaagggcgagaagatcatgctggcc
atcatcaccaagatgacgctcacgcaggtgtccacgtggttcgccaacgccagacggaga
ctcaagaaggagaacaagatgacgtgggcaccgaggaacaagggctcggacgagaagaga
tgcggagacgatgacgacggctcgcaggaggagcagatcaaaagtgacacgaacgatgac
gagagccgaagccgagatgataaggaccttcagctgagcgacctggacgacttcgacgcc
atcgagtcggagagctccgagtgcgacataaagcatcagttccacgtaaatgcgcacatg
aacacgctacctgagcacctcaaagagacttccctaaagttaccctcccttgaaggagac
gctttaaagttaccgtcgattagaacctcattggaaagagataccgatttgcccaaaagc
tgcctgaaaactccgagccgagactgcgagcacaatcccagcgggaataccaaaatctgt
ttccagcaagaccaccaaactcttgatagcaagccgcggatttggtcgttggcccaaacg
gccacctcgctaaatccgaccgagtattcgtcatgcatgcttcgatgtcagccagtgatc
cccagctcatcctcgccacctgttaaagtcccagagaagcagcaggactcaccggtcacc
acgttgagacactggatggacggcgttttccacgaccccttattcaaacacagcactttg
gaccaagcgcacaacagcaacacggctggttcctggacaacaaccaaaggctcgatcctg
gagagcggagcgcaacgcgattaa
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