KEGG   Pangasianodon hypophthalmus (striped catfish): 113534151
Entry
113534151         CDS       T05759                                 
Symbol
wdr24
Name
(RefSeq) GATOR complex protein WDR24
  KO
K20408  SEA/GATOR complex protein SEA2/WDR24
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    113534151 (wdr24)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:phyp04131]
    113534151 (wdr24)
Membrane trafficking [BR:phyp04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    113534151 (wdr24)
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 WD40 Beta-prop_TEP1_2nd Beta-prop_EIPR1 WDR55 Beta-prop_EML_2 Beta-prop_RIG_2nd WD40_WDHD1_1st Beta-prop_EML Beta-prop_CAF1B_HIR1 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd MIOS_WD40 WD40_RFWD3 Beta-prop_WDR19_1st ANAPC4_WD40 Beta-prop_WDR75_1st zf-RING_16 Beta-prop_HPS5 Beta-prop_NUP159_NUP214 DUF1290
Other DBs
NCBI-GeneID: 113534151
NCBI-ProteinID: XP_026782574
LinkDB
Position
Unknown
AA seq 773 aa
MEKMASVSTISGRTMFCLLDAPANAISVCRDATQVVVAGRNIFKIFAIEEEGFVERLNLR
VGRKPSLNFSCADVMWHQADDSLLATAATNGAVVTWNLSRPCRNKQEHLFAEHKRTVNKV
CFHPSEAHMLLSGSQDGFMKYFDLRKKESVSTFSGQSESVRDVQFSTKDFFTFAASFENG
NVQLWDIRRPDRYERMFTAHTGPVFCCDWHPDDRGWLATGGRDKMVKVWDMTTNRAKEIY
CVQTIASVARVKWRPERRWHLATCSMMVDHNIYVWDVRRPYIPFATFEEHKDVATGIVWR
NQHNPDVLLSGSKDSTLYQHMFNDASRPEVRANPEGLSFGLFGDLAFAAKESLISAEGGR
KPCPGGDRRYPFFFGKKHDVMERFAQVSSVLSVFECEADSGTRMDWFIETARRYQLSGRP
FAELCDHNAKVAKELNRPQVSTTWTMLRIMYSDPGHPTPPANHNMSKLGNMPLMNSFSLK
DMSAALNERNKENRQDNLHNLETNLNNDENEETEGSDGQAEYLFGEAELDDDDLYSMEHD
NQAAEEAEFSLPQEAFPLRHEIVEHATAPELLTEKAESPQASGGETESVCLTPMESFSLI
SVSQLLFQPRLLPGFFNAIVKDTLAYYAEQGDVQMAVSVLIVLGERIRKEIDELTQEHWY
MSYIDLLQRFKLWNVSNEVIKLSTCSAITCLNQASTTLHINCSNCKRPMSNKGWICDRCH
QCASVCAVCHHVVKGLFVWCQGCSHGGHLEHVMEWLKSSNHCPAGCGHLCEYA
NT seq 2322 nt   +upstreamnt  +downstreamnt
atggagaagatggcctccgtcagcaccatcagtggccgaaccatgttctgcctgctggat
gctccggccaacgctatcagcgtgtgtcgggatgccacgcaggtggtggtggccgggcgc
aacatcttcaagatctttgcgattgaagaggaaggctttgtggagcggctgaacctgcgc
gtgggccgcaagccgtcgctgaacttcagctgcgctgacgtcatgtggcaccaggccgac
gacagcctcctggctacggcggctaccaacggcgcggtggtgacgtggaacctgtcgcgg
ccgtgccgtaacaagcaggagcaccttttcgccgagcacaagcgcaccgtcaacaaggtg
tgcttccaccccagtgaagcgcacatgctgctctccggttcccaggacggcttcatgaag
tacttcgacctgcgcaagaaggagagcgtcagcaccttctccggtcaatcagagagcgtt
cgagacgtgcagttcagcacaaaggactttttcacgtttgcagcgtcgtttgagaacggg
aacgtgcagctgtgggacatccgcagacctgaccgctatgagaggatgttcactgcacac
accggccccgtgttctgctgtgactggcaccctgacgacagaggatggctagcgacaggt
gggcgtgacaagatggtgaaagtgtgggacatgacgaccaaccgcgccaaagagatctac
tgcgtacagaccatcgcctcggtggcgcgggtcaagtggcggcccgagcgtcgctggcac
ctggccacgtgctccatgatggtggaccacaacatctacgtttgggacgtacgccggccc
tacatccctttcgccaccttcgaggagcacaaggacgttgccacaggcatcgtgtggcgc
aaccagcacaaccccgacgtgctgctttctggctccaaagacagcactttgtaccagcac
atgtttaatgacgccagtcgcccagaggtgcgcgccaaccccgagggcctcagctttggt
ctgttcggagacctagccttcgccgccaaagagagcctgatatcggctgagggtgggcgc
aagccgtgcccaggcggagaccgccgctaccctttcttcttcggcaagaagcacgacgta
atggagcgctttgcacaggtctccagcgtgctcagtgtatttgagtgtgaggcggacagc
ggaaccaggatggactggttcatcgagacggcgcgcaggtatcagctgagcgggagaccc
ttcgctgagctctgcgaccacaacgccaaggtcgccaaggagctcaacagacctcaggtg
tcaaccacatggaccatgctacgcataatgtattctgacccgggtcacccaacaccaccg
gccaatcacaacatgagtaaactgggtaacatgcccctgatgaacagtttcagtttgaag
gatatgagtgctgctttgaatgagagaaacaaagagaatagacaggacaacctgcacaac
ctggagaccaacctcaacaatgacgagaatgaagagacagagggaagtgacggtcaggcc
gagtatctgtttggagaggccgagttggacgacgacgacctgtacagcatggagcacgac
aatcaggcagcggaggaggcggagttttctctcccccaggaggcgttcccactacggcac
gagatcgtggaacacgccacggcgcccgagctgctgaccgagaaagctgagtccccgcag
gcgagtggcggcgagacggagagcgtgtgtctgacacccatggagtcgttcagcctgatc
tcggtgtcacagctgctcttccagccacgcctgctgcctggcttcttcaacgccatcgtc
aaggacacgctggcctactacgctgagcagggtgacgtgcagatggccgtctccgtgctc
attgtgctcggagaacgaatccgcaaggagattgatgagctcacacaggaacactggtac
atgtcctacatcgacctgctgcagagattcaagctgtggaacgtcagcaacgaggtgatc
aaactgagcacgtgcagcgctatcacgtgtctgaaccaggcatccaccacactgcacatc
aactgcagcaactgcaaacgacccatgagcaacaagggctggatctgtgacaggtgccac
cagtgtgcgagtgtgtgtgcagtgtgtcaccacgttgtgaagggtctgttcgtgtggtgt
cagggctgcagccacggcggccatttggagcacgtgatggagtggctcaagagctccaac
cactgccctgctgggtgtggacacctgtgtgaatatgcctga

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