Pangasianodon hypophthalmus (striped catfish): 113534153
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Entry
113534153 CDS
T05759
Name
(RefSeq) cartilage intermediate layer protein 1-like
KO
K24436
cartilage intermediate layer protein
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
113534153
Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
113534153
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Mucin2_WxxW
TSP_1
Ig_3
Ig_2
TSP1_spondin
CarboxypepD_reg
I-set
CarbopepD_reg_2
ig
TSP1_ADAMTS
V-set
Motif
Other DBs
NCBI-GeneID:
113534153
NCBI-ProteinID:
XP_026782585
LinkDB
All DBs
Position
Unknown
AA seq
1256 aa
AA seq
DB search
MRKWTWVALVLCTFFALALAQGSSWNSSQLRKLSHRNRNTKLAYNSILEPQTTGVTEWTS
WFNIDHPGGNGDYERLEAIRFYYRERVCARPVAMEVRTTDWVPASDTGEVVHSSLEKGFW
CINKEQPYGRICSNYHVRFQCPPVQTYWTNWSEWGPCSTTACNDVGIQVRRRKCMSTQPL
SKLVPPACPGPHAERRECSTPPCQAKWSQWGTWSTCSVTCGKGRRTRQRTCSRSSDTVRC
RGRPVEVQKCGNTPCPVVCQLVCPEGHPNEECSHCICEGQTLRGEVLSVTGVPVSGASVA
VADQPKVIRAQTDDKGLLKIHGMCLGPETRLLISKEKFAPATVPIFRNSSENLWVRAFLR
SSEKPYILKHPEDKVRYEGQRVTLCCKATGTPLPDKYYWYHNGTLLDQKLYKYDGDLVLR
DLKPEHTGMYYCKANSLTGTIKSNPAFLTVFEKGTPACNATPESHLIKLPLDCKQSGTKS
KWYNAGRCTNNKCPGSLDFDLRCKDSSSFCCGVKQMETKEINCGSYILPIKVVTECSCQK
CVQPKILVRGRVVAADNNEPLRFGHIFIGKERIGITGYQGGFTIQVPTDTQRLVVNFVDP
SQKFLDTLKVFVFDKKGGSVYHDVKVMRKQEPIDINAAESNTIYLGEIKGEEPIGQLIIP
PNSFHKDTGETYEGMVKASVTFFDPRNVTTAAAIPGDLNFVGDEGDVLPLRTYGMFSLDF
RDEANQEILGAGEVQVLLDTEHVKMPEHIPTMKLWSLNPVTGIWEEESNFQPTQVTTSGN
GRKKREERTFLIGNMEIRERRLFNLDVPENRRCYVKVRAYMSDKFLSTEQLEGVVISLIN
LEPRPGYSSNPRAWGRFDSVITGPNGACLPAFCDAQRPDAYTAYVTATMGGEELEAAPST
PKMNPNIIGVLQPYLDKLDYQRSDHDDPALKKTAFRINLAKPNPNNLDETNGPIYPYQSL
ISCENAPIDANHFRFFRVEKDKYEYNVVPFQENDLTTWTGDYLSWWPNPQEFRACYIKVK
IHGEVEVMVRSKNFGGTHSQTRGQLYGIRDIRSTRDLKHPNTSAACLEFKCSGMLFDQGT
VDRSLITVLPQGNCRRIGINSLLQEYLIKHPPLLQNNESHAFTMLAPVDPLGHNYGIYTV
TDQNPRIAKEIAIGRCFDGTSDGFSREMKSDSGVALTFSCPKRTVNRESLFQRLQTNPGQ
TLAQMARDMRESQGTQVRRGSAQVVAYPSDQQGRIQSRRVSNSSRRRTAIRTQQRQ
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagtggacgtgggtggcactggtactgtgcaccttctttgctctggccctggca
caaggttctagctggaacagctcacagctacgaaagttgagccataggaacaggaacaca
aagctggcctacaacagcatccttgaacctcagaccacaggagtaaccgagtggacatcc
tggttcaacattgaccatcctggtggtaatggggactatgagaggctagaggctattcga
ttttactaccgagagagagtgtgtgcacggcctgttgccatggaggtccgtactactgac
tgggtacctgcttcagacaccggggaggtggtacattccagtctggagaaaggcttctgg
tgcattaataaagaacagccatatggacgcatctgctccaactaccatgtgcgattccag
tgtccaccagttcaaacatattggacaaactggagtgagtggggtccttgttcaaccact
gcctgtaatgatgtgggcatccaagtgcgccgacggaaatgcatgagcacgcagcctctg
tccaagctggtccctccagcctgcccaggacctcatgctgagcggcgagaatgctctact
ccaccttgccaagctaagtggagtcagtgggggacgtggagcacttgctcagtgacctgt
gggaagggtcggagaaccagacagagaacttgtagcagatcatctgacacagtccgctgc
agaggacggccagtggaagtccagaagtgtggaaataccccatgtccagtggtgtgtcaa
cttgtttgtcctgagggacacccaaatgaggagtgcagccactgcatttgtgagggacag
acactacgaggggaagtcttgagtgtgactggagttccagtgtctggagccagtgtggct
gtggcagaccagccaaaggttatccgtgcccagacagatgataagggtttgctcaagatc
catggcatgtgcttaggcccagagactcggctactcatcagcaaggaaaagtttgctcca
gccactgtccctattttcagaaatagcagtgaaaacctctgggttcgagctttcctcagg
tcctcagagaagccatacattctcaaacatcctgaagacaaagtacgatatgaaggacaa
cgtgtgactctttgctgcaaagcaacaggaacccctttacctgataaatattactggtat
cacaatggaactttactggaccagaaactatacaaatacgatggagacttggtattgcgt
gatctgaaaccagaacatactggaatgtattattgcaaagccaatagtctaacaggaacc
attaagtccaatcctgcattcctgactgtttttgagaaaggaacgccagcatgtaacgct
acacctgaaagtcacctgattaaattgcctttagactgcaaacagtcaggcacaaaatcc
aagtggtataatgctggtcgctgtactaacaacaaatgtcctgggtcactggactttgac
ctacgatgcaaagattcctctagtttctgctgtggggtgaagcaaatggaaacaaaggag
atcaactgtggcagctacattcttccaataaaggttgtgactgaatgcagttgtcaaaaa
tgtgtccaacccaaaattctggtacggggtagagtggttgctgcagacaataatgagccc
ttacgatttggacacattttcataggaaaggaacgaataggaattacaggttatcagggt
gggttcacaattcaggtgcccactgacacccaacgtctggtagtaaactttgtggaccca
tcccaaaagttcttagatacactcaaagtgtttgtttttgataagaagggtggttcagtt
taccatgacgtaaaagtaatgcgaaagcaggaaccaattgacatcaatgctgcagagagc
aatactatttatctgggtgaaataaaaggggaggagcccatcggtcagctgatcatacct
cccaattccttccacaaagacactggggaaacatacgaaggcatggttaaagcgagtgtc
actttctttgatccacgcaatgtcacaacagctgcggctattccaggagacttgaatttt
gtgggtgatgaaggtgatgtgcttcctttgaggacatatgggatgttttctcttgatttc
agagatgaggcaaatcaggagatccttggagctggtgaagtccaggtgctccttgacaca
gagcatgtcaaaatgccagagcatatacctactatgaaactgtggtctctcaatccagtc
acaggtatttgggaggaagagagtaattttcaacctactcaggttaccactagtggaaat
gggaggaaaaaaagagaggagcgcacgttcctgataggaaacatggaaatcagagagcgc
agactgtttaacttggatgtacccgaaaatcgccgctgctatgtcaaagttcgggcatac
atgagtgacaaattcttgtctactgagcaacttgaaggtgtggtgatcagtcttataaac
ctggagcccaggcctggatactcatcaaatcctagagcttggggacgttttgacagtgtg
ataacaggaccgaatggagcttgtcttccagccttctgtgatgcccagagacctgatgca
tacacagcctacgtcacagccacaatgggaggtgaagaacttgaagcagccccatctaca
ccaaaaatgaatcctaacatcattggcgtattacaaccatacttagacaaattagattat
caacgatcagatcatgatgatccagcactcaaaaaaactgcctttagaataaatttagcc
aagccaaatccaaataatctggatgaaaccaatggaccaatatatccttatcaaagtcta
atctcatgtgaaaatgcacccattgatgcaaatcatttccgtttcttccgtgtggagaaa
gacaaatatgagtacaatgtagtaccttttcaggagaatgatctcacaacttggactggg
gactacctctcatggtggccaaacccacaggagttcagggcttgctatattaaagttaag
atccatggagaagtagaagttatggtcaggtcaaagaactttggtggtacccattctcag
accaggggtcagttgtatggaattagggacatacgcagcactcgtgacttgaaacatcct
aacacttctgctgcttgcttggagttcaaatgcagtggaatgctttttgaccaaggcact
gttgaccggtctctaattactgtccttccacaaggcaactgtcggcgaataggcatcaac
agtctcctgcaagagtaccttataaagcacccccctcttctacagaacaacgagtctcat
gcatttaccatgttagctcccgtggacccactgggccataattatggaatatacactgtc
acagaccagaacccacgcattgccaaagagattgccataggacgctgctttgatggtacc
tcagatggtttctcaagggagatgaaatcagattctggagtggctctaactttcagctgc
ccaaaaagaactgtaaaccgtgagagcctcttccagcgcttgcaaacaaatcctggccaa
accttggcacaaatggctcgggacatgagggaatcacagggaacacaggtcagaagaggg
tcagcacaggtggtggcatatccttctgatcaacagggcaggatccagagccgcagagtt
agcaacagcagcaggagaagaactgctatacggactcaacagaggcagtag
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integrated database retrieval system
