Pangasianodon hypophthalmus (striped catfish): 113534186
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Entry
113534186 CDS
T05759
Name
(RefSeq) excitatory amino acid transporter 1-like
KO
K05617
solute carrier family 1 (high affinity glutamate/aspartate transporter), member 6
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
113534186
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phyp02000
]
113534186
Transporters [BR:
phyp02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
113534186
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SDF
K-box
Motif
Other DBs
NCBI-GeneID:
113534186
NCBI-ProteinID:
XP_026782634
LinkDB
All DBs
Position
Unknown
AA seq
528 aa
AA seq
DB search
MQKQVSGTKVRMCSINRNAIKAFLHRNSFVLFTVGAVVVGIILGFAVRPQNLSLREIKYL
SFPGELLMRMLQMMVLPLIVSSLVTGISYLDSKATGKMGVRAIIYYIVTTFIAVFIGIVM
VTIIKPGKGKRDTPMSTSGRADSVTATDAFLDLIRNMFPSNLVEACFKQYKTLYKKSILT
KNITVMVNLSGIVINATESSQMGNYSTVLQTIQETVEEIIPVSGSSNGVNALGLVVFSMF
FGFVIGNMKQQGQPLKDFFDCLNDAIMRLVAIIMWYAPVGILFLIAGKIVEMKDLLQVGG
QLGMFMLCVIIGLLIHSLIALPLLFYLGTRRNPYTFISGLLQALVTAFGTSSSSATLPIT
FRCLEENNHVDKRVTRLVLPVGATINMDGTALYEAVAAIFIAQVNDMDLNFGQILTISIT
ATAASIGAAAIPQAGLVTMVIVLTSVGLPTEDITLIIAVDWILDRLRTTTNVLGDSLGAG
IVEHLSREELQNLDTGISSSVIEVNEKPYQLICQEDDCLRHQKSETTM
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaacaagtgtctggaaccaaagtcaggatgtgctccattaaccgaaatgccatc
aaggcattcctgcatcgcaactcctttgtgctcttcactgtgggagcagttgtagtagga
ataattttgggatttgctgtgcgacctcaaaacttatcattgagagaaataaagtattta
tccttccctggggagctactgatgaggatgttacagatgatggtccttccactcattgta
tccagtcttgttacaggtatttcatatttggacagtaaagccactggaaagatgggagtg
cgggctatcatttactatatcgtgactacttttattgctgtgttcattggtattgtcatg
gtgaccatcataaaacctggaaaaggcaaaagagacactccaatgtctactagtggcaga
gctgattcggtgacagctactgatgcatttcttgatctaattagaaatatgttcccttct
aatttagtggaagcctgctttaaacagtacaaaacactttacaagaaatctattttgaca
aagaacatcactgttatggtgaatttaagtggcattgttattaatgccactgagtccagc
caaatgggaaattacagcacagtcctgcagaccatccaggagacagtggaggagattatt
ccagtctctggttcctctaatggagtgaatgctctgggtctagtggtgttctccatgttc
ttcggcttcgtgattgggaatatgaagcagcagggccagccactgaaggatttctttgac
tgcctcaatgatgccataatgcgcttggtagcaatcattatgtggtatgctccagttggg
atcctctttctaattgctgggaagattgttgaaatgaaagacctattacaggttggagga
cagctgggaatgttcatgttgtgtgtcatcatcggtctgcttatccacagcctcattgct
ctgcctctacttttctatttgggtacacggaggaacccctacactttcatctctggtctg
ctccaggctttagttacagcctttggaacatcctcaagttcagccacccttcccatcacc
ttccgttgcttggaggagaacaaccatgtggacaaacgtgtaacacgccttgttttgcct
gtgggagccaccataaacatggatggtacagctttatatgaagcagtggctgccattttc
atagcccaagttaatgacatggacctgaattttggacaaatccttaccatcagtatcaca
gcgactgctgccagcattggagcagcagccattcctcaggctggtctggtaaccatggtg
attgtattgacatccgtgggactgcccaccgaggacataacactcatcattgctgtggat
tggatcctagatcgcctcagaaccactaccaatgtgctgggagactccttgggagctggt
attgtggaacatctatcaagagaggaactgcagaacctggatactgggatcagcagctct
gtgattgaggtcaatgaaaaaccttaccagctcatctgccaggaggatgattgtctcaga
catcaaaagagtgaaacaacaatgtaa
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