Pangasianodon hypophthalmus (striped catfish): 113534304
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Entry
113534304 CDS
T05759
Name
(RefSeq) excitatory amino acid transporter 1-like
KO
K05617
solute carrier family 1 (high affinity glutamate/aspartate transporter), member 6
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
113534304
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phyp02000
]
113534304
Transporters [BR:
phyp02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
113534304
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GFIT
Motif
Pfam:
SDF
Motif
Other DBs
NCBI-GeneID:
113534304
NCBI-ProteinID:
XP_026782799
LinkDB
All DBs
Position
Unknown
AA seq
520 aa
AA seq
DB search
MQKQMSGAKVRMCKSFLRRNTFVLFTVAAVVVGIALGFVLRPHDLSLREIKYFSFPGELL
MRMLQMLVLPLIVSSLVTGISSLDSRASGKMGARAIIYYMVTTFIAVFIGIVMVIIIKPG
KGNRDNPMSSSGSIESVQAADAFLDLIRNMFPPNLVEACFKQYKTLYKKTVFTKDITVLI
NASHDTNATKFSQVGNYSAVLQTIQETVEEVIPVSGSSNGVNALGLVVFSMFFGLVIGNM
KQQGQPLKEFFDCLNDAIMRLVAIIIWYAPVGILFLIAGKIIEMKDLAQVGGQLGMYTVC
VIIGLLIHGLFILPLLFFLITRRNPYTFIGGLIQALVTALGTSSSSATLPITFRCLEENN
HVDKRVTRFVLPVGATINMDGTALYEAVAAIFIAQVNSMDLNFGQILTISITATAASIGA
AGIPQAGLVTMVIVLTSVGLPTEDITLIIAVDWFLDRLRTTTNVLGDSLGAGIVEHLSRQ
ELQKLDTDTGNSETEENKKPYQLICQEDDWLGHQNSESTM
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaacaaatgtctggagccaaggtgaggatgtgcaaatcattcctgcgccgtaac
acatttgtgctcttcactgtggcagcagttgtggttggaatcgcgttgggatttgttctg
cgacctcacgacttatccttgagggaaataaaatatttctccttccctggggagctactg
atgaggatgttacagatgctagtccttccactaattgtgtccagtcttgttacaggtatt
tcttccttggatagtagagcttctggaaagatgggagcacgggctattatttactatatg
gtgaccactttcattgctgttttcattggtattgtcatggtgatcatcataaagcctgga
aaaggcaacagagacaatccaatgtcctcaagtggcagcattgaatcagtgcaagctgct
gatgcctttctggaccttattagaaatatgtttccacctaatttagtggaagcctgtttc
aaacagtacaaaactctttacaagaaaacagttttcacaaaggacatcacagttttaatc
aatgcaagtcatgacaccaatgccaccaagttcagccaggtgggaaattacagcgcagtc
ctgcagaccatccaggaaactgtggaggaggtgattccagtctcagggtcctctaatgga
gtgaatgctttaggtctggtggtgttttctatgttctttggcttagtgattgggaatatg
aagcagcagggtcagccactgaaagaattcttcgattgcctcaatgatgccataatgcgc
ttggtagcaatcataatctggtacgcgccagttggtatcctctttctaattgctggaaag
atcattgagatgaaagacctggcacaggttggagggcagcttggcatgtacacagtctgt
gtcatcattggtttactcatccatggtctcttcattctgcccttgctattcttcctgatt
actcggagaaacccctacacatttattggtggtctaatccaggctttggttactgcctta
ggaacatcttccagttcggccacgcttcccatcaccttccgttgcttagaggagaacaac
catgtggacaaacgtgtaacacggtttgttttgcctgtgggagccaccataaacatggat
ggtacagctttatatgaagcagtggctgccattttcatagcccaagttaatagcatggac
ctgaactttgggcaaatccttaccatcagtatcacagcgactgctgccagcattggagca
gcaggtattcctcaggctggtctggtaaccatggtgattgtattgacatccgtgggactg
cccaccgaggacataacactcatcattgctgtggattggttcttggatcgcctcagaacc
actaccaatgtgctgggagactccttgggagctggtatcgtggaacatctgtcacgacag
gaactgcagaaactggacacagatactggcaactctgagactgaggagaacaaaaagcct
tatcagctcatctgccaggaggacgactggcttgggcaccaaaacagtgagagtacaatg
taa
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