Pangasianodon hypophthalmus (striped catfish): 113534309
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Entry
113534309 CDS
T05759
Name
(RefSeq) ran GTPase-activating protein 1-like
KO
K14319
Ran GTPase-activating protein 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113534309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phyp03019
]
113534309
Messenger RNA biogenesis [BR:
phyp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
113534309
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
LRR_4
CDC45
BUD22
Mpp10
eIF-3c_N
Tim54
Motif
Other DBs
NCBI-GeneID:
113534309
NCBI-ProteinID:
XP_026782801
LinkDB
All DBs
Position
Unknown
AA seq
595 aa
AA seq
DB search
MASDVVAQLADSLARTQVGEGELSYKGQGLKLDNAESVEEIVKAIREFEGLRALRLEGNT
FGVEAAQAIAKALEDKRDFQCCYWSDMFTGRLRSEIPPALTSLGAALISAGAQLKVLDLS
DNAFGPDGVKGIETLLKSSACHTLQELRLNNCGMGIGGGKILAAALTHCHKESSKLGAPL
RLKIFIAGRNRLENDGATALAQAFQLIGSLEEVHMPQNGINHPGVTALANAVQHNPQLRV
LNLNDNTFTKKGAIAMAQALKHLRSVQVINFGDCLVRSEGAFAIAETLKDGLPILKELNL
SFGEITGEAALAVAKAVKHKDQLEKLDLNGNCIGEEGCENLRELMQSMNMDNLLASLSDD
EGEPDDDDDDDGEDDEEEEEEDDDDDDEEEEEEKGEDEEEDDEDDDEEEENEEEGEDEPS
ATEQISTPPSAPRPPDVSSFLCFPSPEKLLRLGDQRVQLIQKQVDVTDVSKTVEAFLKIS
SVYKEEDLEVKAAVLDSVDAVLSKAFSTPSVQTFSFISALLVMLGLLKSEDKLKPVAVVP
GHLQCLEHAVKQKYFPREHIAVLQAFLARQNKSLDSCISARDSLRATLQRLLPES
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggacgtggtggcccagctggccgactctctggcccggacgcaggtgggagag
ggagagctgagctataagggacagggcctgaagctggacaacgctgaatctgtggaggag
atagtgaaggcgattcgggagtttgagggtttacgcgctctgcgtttggagggaaacaca
ttcggagtggaggcagcacaagccatcgctaaggcactggaggacaagcgagattttcag
tgctgttactggagtgatatgttcacgggccgcctgcgttcagagatccctcctgctctg
acatctctgggtgcagctctaatatccgccggcgctcagttaaaggtgctggatctgagc
gataacgcgttcggacccgatggcgtgaaaggcatcgagacgctgctgaagagctcagcg
tgtcacacactgcaagagctgcgccttaacaactgcgggatgggcatcgggggaggaaag
atcctggcagcggccctgacacactgccataaagagtcgagtaagctcggcgcccctctg
aggctgaagatcttcatcgcaggacggaacagactggagaacgacggagccacggcgctg
gctcaggcctttcagttgatcggcagtctggaggaagtccacatgcctcagaacggcatc
aaccaccccggagtgacggctctggccaacgccgtgcagcacaacccccagctccgagtg
ctcaacctcaacgacaacactttcaccaagaaaggagccatcgccatggcgcaggctctg
aagcacctccgcagtgtgcaggtgataaacttcggtgactgtttggttcgctctgaggga
gccttcgccattgccgagactctgaaagatggccttcccattctcaaggagctgaacctg
tcgtttggggagatcacaggagaggctgctctggctgttgcaaaagcagtaaagcacaaa
gaccagctagagaaactcgacctcaatggtaactgtattggtgaggaagggtgtgagaac
ctccgggagctcatgcagagcatgaacatggacaacctcctggcctctctgagtgatgac
gaaggagagccagatgatgacgatgatgatgatggcgaagatgatgaagaggaggaggag
gaggatgatgatgatgatgatgaggaggaggaggaagagaagggggaggatgaggaagaa
gatgatgaagatgatgatgaagaggaggaaaatgaggaagagggggaagatgagcccagt
gcaaccgaacagatatcgactccaccttcagcccctcgccctccagacgtctcgtccttc
ctctgtttcccgtctccagagaaactgctgcgcctcggagaccagagagtccaactgatc
cagaaacaggtggatgtgacagacgtgagtaagactgtagaggcttttctgaagatctcg
tctgtgtataaggaagaggatcttgaggtgaaagcagcggtgttggacagtgttgatgct
gttttgagtaaagccttttccacgccatcagtccagacatttagtttcatctctgcgtta
ctggtgatgcttggtcttttaaagagtgaggataaattaaaacccgtggcagtcgtacca
ggtcacctgcagtgtttggagcatgcagtgaagcagaagtattttcccagagagcacatc
gctgtgctgcaagcttttttggccagacaaaacaagtccttggactcatgcatcagtgct
cgagacagccttcgtgccaccctgcagagactactgcccgagagctaa
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