Pangasianodon hypophthalmus (striped catfish): 113534320
Help
Entry
113534320 CDS
T05759
Symbol
thsd4
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
113534320 (thsd4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
113534320 (thsd4)
Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
113534320 (thsd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
ADAMTS_spacer1
ADAMTS_CR_3
TSP1_spondin
PLAC
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
113534320
NCBI-ProteinID:
XP_026782815
LinkDB
All DBs
Position
Unknown
AA seq
962 aa
AA seq
DB search
MNRVSCVSVVMVIGLLWTNLSDGQLTLDHKKVAPRPVVEPQILDSDSSGSWGSWGPWGEC
SRSCGGGVQERSRPCLRTYSPPVTVYSSRQGPHTGRQDPSMVISALRPSVPVHHGNNRPL
PDAQGSHLTSRGETRKQQSEARPGRRRGGSTRISPGMYGYGKLPYVVSSQRDSGQTMYSQ
RQPRSPSDYRYNSYRQQKYRNTQQSPPQNTHHSMSQQASWVPLHQPSSGLQSQGKPHPPG
TLTSGFSQASAPGRPHNPQPLPASSCSGAANQYRMCNVNPCPPASRNIRDIQCSSYNNHP
FMGRLYEWEPFNEVPGDQLCELNCRAIGYRFYVRQSNRVIDGTPCGQNESAICVAGTCQS
PGCDELLGSGKVLDKCGVCGGDNTACRLVSGLFQHSLSKVGYHKIVEIPQGATKINITEM
VKSQNYLALRSRSGRSIINGNWAIDRPGKYEGGGTMFTYRRPNEISSTAGESFLAEGPTS
EILDVYMIYQQPNPRVHYEYILPSENSVSTPTNTEEGNTVTGGAGDDQYGRRPSQDGHER
TDGHRNPPHIPESQVPPRRHREHNWKLTGTTDCSVSCGRGVRHTVFGCVHRVTHELVSDS
YCDSATKPSTQEEPCNVQPCPAFWDIGEWSECSKTCGLGMQHRQILCRQFYINRTLTVPA
KRCEHLERPESSSTCQLKICSEWQIRSEWSSCSMPCGVGQRTREVRCVSNVGDIVEDEEC
NMNLRPRDIENCDMGPCAKSWFYTDWGEQCSADCGFGVRSRSVVCLSNLVSSVPLEGCGT
ERPPQAQPCNTGPCESRTEWFTGPWGQCSAECGTGSQQRTVVCMMKSDDSYAVMPLYECS
SLDKPLSQQSCTLKACGAKWYYTDWSACSKTCEGGFRVREVRCLSDDMMPSEGCEEQLKP
EDKEECNLDPCVPQIDEKCRDKYFNCNVVVQARLCVYDYYKKACCASCARVAQRQSTHRS
YR
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgaacagagtgtcatgtgtaagcgttgtcatggttatcggcctgctttggacgaacctc
tccgacggccagctcacactggaccacaagaaggttgctcctagaccagtggtcgagcct
cagattttggacagtgactcttctggatcgtggggctcttggggtccgtggggcgaatgc
tctcgctcctgtggtggtggggtacaggagcgaagcaggccatgcttacgcacgtacagc
cctccagtcacagtttattcttccagacagggtcctcacacggggcgccaggatccgagt
atggtcatatcagcattaaggccctctgtgcctgtgcatcatggcaataacaggcctctt
ccagatgctcaggggtcacaccttaccagtcgtggggagacaagaaagcagcagagtgaa
gcacgccctgggaggcggcgaggaggcagcactcggatcagcccagggatgtacggttac
gggaagttgccatatgtggtctcctcacagagagattctggacaaaccatgtacagccag
cgacagcctcgctcaccatctgactacagatacaacagctatagacagcagaagtataga
aatactcagcaaagtccccctcaaaatacccatcacagtatgagccagcaggcatcctgg
gttcccctccaccagcccagctcgggtctccagtctcaggggaagccgcaccctcctggc
acactgacatcaggttttagccaagcttcagctcctgggagacctcataacccgcaaccg
cttccagcctcctcctgctctggagctgccaaccagtacaggatgtgcaacgtgaatcct
tgtccccctgccagcaggaatatcagagacatccagtgttcctcctataacaatcacccc
ttcatgggccggctctatgaatgggaacctttcaatgaagttcctggagatcagctctgc
gagctcaactgccgtgcgatcggataccgtttctacgtccgccagtcgaatcgagtcatt
gacgggacgccgtgtggacagaacgagtcggctatctgcgtggctgggacgtgtcagagt
ccaggatgtgatgagctgttgggttcagggaaggtgctggataaatgtggtgtgtgtggc
ggggacaacacggcgtgtcggctggtttctggactgttccagcacagcctgtccaaagtg
ggctaccacaagatcgtagagatcccacagggagcaaccaaaatcaacatcactgagatg
gtcaagagccaaaactacctcgctttgcggagtcgctctggacgttccatcattaatgga
aactgggccatcgaccgacctggaaagtacgaaggaggagggacgatgttcacttacaga
cggcccaatgagatcagcagcactgctggagagtcctttctagcggaaggaccaaccagt
gagatcctggacgtctacatgatctaccagcagcccaatcctagagtgcactatgagtac
atccttccttctgaaaactccgtcagcacgcccactaacacagaggagggtaacacagtg
actggtggggcaggagatgatcagtatggcagaaggccatctcaggatggacatgaacga
acagatgggcacaggaacccacctcacatacctgaaagccaggtaccgcctcgcaggcac
agagaacacaactggaaactcacgggcacgactgactgcagcgtctcctgtggcagagga
gtcaggcacactgtgtttggctgtgtccatcgagtgactcacgagcttgtgtctgacagt
tattgtgacagcgctactaaacccagcacacaggaggagccctgcaacgtccagccatgt
cccgcattttgggatattggtgagtggtcggagtgcagtaagacgtgcggcctcggcatg
cagcatcgacagattctgtgccgacagttttacatcaaccgcaccctcaccgtgcccgct
aaacgctgcgaacacctggagcggccggagagcagcagcacctgtcagctgaagatctgc
agcgagtggcagattcgctctgagtggagctcttgctccatgccctgcggtgtaggccag
agaacacgtgaggtgcgctgcgtcagtaatgtgggtgatattgtagaggatgaagagtgc
aacatgaatcttcgtccccgtgacatagagaactgtgacatggggccgtgtgctaagagc
tggttctacacagactggggtgagcagtgctctgcagattgtggctttggtgtgcgaagc
cgcagtgttgtgtgtctctctaacctggtgagcagtgtgcctctggagggctgtggtaca
gagcgcccccctcaggctcagccgtgtaacactgggccatgtgagagccgcactgagtgg
ttcactgggccctggggtcagtgctcggcggagtgtggaacaggcagccagcagaggaca
gtggtgtgtatgatgaagtctgatgacagctatgcagtgatgccactgtacgaatgctct
tctctggacaaaccactcagccaacagagctgcactctgaaggcctgtggagccaagtgg
tactacaccgactggagtgcatgttcaaagacgtgtgaggggggattccgtgtgcgagaa
gtgcgctgtctctctgacgatatgatgccgagcgagggatgtgaagaacaactgaaaccg
gaggacaaagaggagtgcaacctcgacccctgtgttccacagatcgatgaaaagtgtcga
gacaaatatttcaactgcaacgtggtggtccaggcccgcctgtgtgtgtatgattactat
aagaaggcgtgctgtgcctcgtgtgcgcgcgtggcgcagagacagtcgacacacaggagc
tacagatag
DBGET
integrated database retrieval system
