Pangasianodon hypophthalmus (striped catfish): 113534337
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Entry
113534337 CDS
T05759
Symbol
snrpa
Name
(RefSeq) U1 small nuclear ribonucleoprotein A
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113534337 (snrpa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phyp03041
]
113534337 (snrpa)
Spliceosome [BR:
phyp03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
113534337 (snrpa)
Complex B
113534337 (snrpa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
DUF4523
xRRM
Motif
Other DBs
NCBI-GeneID:
113534337
NCBI-ProteinID:
XP_026782839
LinkDB
All DBs
Position
Unknown
AA seq
280 aa
AA seq
DB search
MSGQELRLNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRTLKMRGQAFVIFK
EVNSASNALRSMQGFPFYDKPMRIQYAKQDSDIIAKMKGTYVERDRKKEKKKPKTTDSGG
SKKGAAAAPGMAGVPAAMPVSLTATESFGFIHIIQWTLFFFSPGMMPPPGMGPGQMPPGA
MPPGQMMPGQMPGQMPQQVSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPG
RHDIAFVEFDNEVQAGAAREALQGFKITQTNAMKISFAKK
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgtctggccaggagctgcgcctaaaccacaccatctacatcaacaacctgaatgagaaa
atcaaaaaagatgaactgaagaagtcgctttacgctattttctcacagtttggccagatc
ctggatatcctcgtttcccggacgctcaaaatgaggggtcaagcctttgtaatcttcaaa
gaggtcaacagcgcctccaacgctctgagatccatgcagggctttcctttttatgataaa
cccatgcgcattcagtatgccaagcaagactcggacatcatcgccaagatgaagggcacg
tatgtggagcgggatcgcaagaaggagaaaaagaagcctaaaactactgattcgggagga
tcgaagaagggtgctgctgctgctcctggcatggctggagttcctgctgctatgcctgtg
agtttaacagcgactgagtcttttggttttatccatataatccaatggacactttttttt
ttttctcctggtatgatgccacccccaggtatgggccctggacagatgccaccaggtgcc
atgcctccaggtcagatgatgcctgggcaaatgccaggacagatgcctcagcaggtctcg
gagaacccgcctaatcacatcctgttcctcaccaacctgccagaggagaccaacgagctc
atgctctccatgctgtttaatcagttcccggggttcaaagaggtgcgtcttgttccgggt
cgacacgacatcgcctttgtggagtttgacaatgaagtgcaggccggtgcagccagggaa
gcgttacagggcttcaagatcacgcagactaacgcaatgaagatctcgtttgccaagaaa
taa
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