Pangasianodon hypophthalmus (striped catfish): 113534364
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Entry
113534364 CDS
T05759
Symbol
fgd4
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 4 isoform X1
KO
K05723
FYVE, RhoGEF and PH domain containing 4
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
113534364 (fgd4)
Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
113534364 (fgd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
IQ_SEC7_PH
PH_13
FYVE_2
RHG20_PH
HEF_HK
IFN-gamma
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
113534364
NCBI-ProteinID:
XP_026782883
LinkDB
All DBs
Position
Unknown
AA seq
861 aa
AA seq
DB search
MLDRSKEAMGDFRRTAFRRKPKSGGSDEQPEEQTEKASKASCFPSKSLDEEEACVGVKIA
EAQDLGSRPADRASRNEKPRQGSRASDRSSARVNGKGSRRQLPQRIKPQVPPKPAHLQTP
VTELCKPLGRSSPFSSKMEEGGGGGGGGGGGGGGGGGKGRVSDLISRFEENRHTDRRDGS
PQKHAPKPAKSSPVQRSSQKPTDTKEQTEDSSTSHDHMPSTNGVLGQMDRNSNDSGAVRP
DGEPLLNGDMVEQRLEEVVDASQSVIETPEKEDESRRTETEAETENEASTDDRGMEHKET
NEQKLYKIANELLQTEKAYVARLNLLEVFCAKLMEEAGKGTFPLEVVKNIFSNISSISTF
HSQFLLPDLEKRMGEWETTPRIGDILQKLTPFLKMYAEYVRNFDKAMELLKQWTDRSPQF
KTIIQDIQKQEVCGSLTLQHHMLEPVQRVPRYEMLLKDYLKKLPQDHVDQRDAEKSLEII
ATAATHSNTAIRKSENLKKLLEIYEMLGEEEDIVNASNEFIKEGHILKLAARNTSAMDRY
LFLFNNMLLYCVPKFSLVGQKFTVRTRIGIDGMKVMETYNEDYPHTFQVSGKERTLELQA
SSEQDKEDWIKAFQETIEIFHQKNETFKMAAKEVEEVSITDLGKRAPRWIRDNEVTMCMK
CREPFNALTRRRHHCRACGYVVCWKCSDNKAPLEYDGNKMNKVCRDCYSILKGHTESEEK
EGKKKGILEIEAAQFSGSSIMCGFLQYCEKNKPWQKVWCVIPQKEALVLYLYGAPQDVKA
QSTIPLLGYSVDDASRPTDPPASFRLSQSKSVHSFAAESEELKQRWLKVIRVCVTGEVPT
SPPPTETHAAESSREPSTESL
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgttggacaggtctaaggaagccatgggagacttcaggagaaccgccttcaggaggaaa
ccaaagagtggaggatcagatgagcagcctgaagagcagacagagaaagcaagcaaggcg
agctgcttcccctccaaatcccttgatgaagaggaggcttgtgtgggagtgaagattgct
gaggcacaagatcttggcagtaggcctgcagatcgagccagtcgaaatgagaagccacgt
caggggagcagagcaagtgacagaagctcggcaagagtaaatggaaaaggctcaagacgc
cagcttcctcagcgtatcaaaccacaagtgcctcctaaaccagcacacctccagactccg
gtgaccgagctgtgtaagccgctgggcaggagctcaccctttagctccaagatggaggag
ggcggaggaggaggaggaggaggaggaggagggggaggagggggaggaggaaaaggcaga
gtgtctgacctcatcagtcgctttgaggaaaacaggcacacagacaggagggacggctct
cctcagaaacacgcacccaaacctgctaagagcagtccggtacagaggagtagccagaaa
ccaacggatactaaagagcagactgaggacagcagcaccagccatgaccacatgccctct
accaatggagtgttaggtcagatggacagaaacagcaatgacagtggagctgtgagacca
gacggcgaaccgctgctgaatggagacatggtggagcaacgtttggaagaggttgtagac
gcgtctcagagtgtcatcgagacacctgagaaagaagatgagagcaggagaaccgagaca
gaggcagagacagagaatgaggccagtacggatgacaggggtatggaacacaaggagacc
aatgaacagaagctgtacaaaatcgcaaatgagcttctgcagacagagaaggcctacgtt
gcaagactaaatttattagaggtgttttgtgccaagctgatggaggaggcaggaaaaggc
acgttccctttggaggtggtgaaaaacatcttctccaatatctcctccatcagtaccttc
cacagccagtttctgctgccagacctggagaaacgcatgggagaatgggagacgacacct
cgaatcggggacattctgcagaaacttacaccctttctgaagatgtatgcagaatacgtg
aggaactttgataaagccatggagctgctgaaacagtggacagaccgctcgcctcagttt
aagaccattattcaggacatccagaaacaggaagtgtgtgggagtctgacgctgcagcat
cacatgctggaaccagtacagagagtaccaagatacgagatgctcctcaaagactacctg
aagaagcttcctcaggaccacgtggaccagcgggacgctgagaaatcgttggagattatt
gccacggcagccacacactcaaacactgcaattcgcaaatctgagaatctgaagaaactg
ctggagatttatgagatgctgggggaggaagaggacattgtgaatgcctccaatgagttt
ataaaggagggccacattctcaaactggcagccaggaacacttcagctatggaccgatac
ctctttctgttcaacaacatgctgctctactgcgttcccaagttcagcctggtgggccag
aagtttacggtgcgcacgcgaatcggcatcgatgggatgaaggtgatggagacgtataac
gaggattaccctcatacgttccaggtgtctgggaaggagcgtaccctcgagctgcaggcc
agctccgaacaagataaagaggactggataaaggcattccaagaaacaatagagatcttt
caccaaaagaatgagacatttaaaatggctgctaaagaagtggaggaagtgtcgataaca
gacctgggaaaacgagcaccccgctggattcgagacaatgaggtgaccatgtgtatgaag
tgtagggaacctttcaacgctctcacccgcaggaggcatcactgtcgagcttgtggctat
gtggtatgctggaagtgctcagacaataaggctcctctggagtacgatggcaataagatg
aataaagtgtgtcgagactgttactccattttaaaaggccacacagagagcgaggagaag
gagggcaagaagaaaggcattctggagatcgaagcagcacagttctcaggcagcagtata
atgtgtggcttcctgcagtactgtgagaagaataaaccctggcagaaagtctggtgtgtt
attcctcagaaggaggctttagtgctctatctgtatggagcaccgcaggatgttaaggct
cagtccaccatcccgctgctgggttactctgtagacgacgcttcccgacccaccgatcct
ccagccagtttccgtctgtcccagtcgaagtctgtccacagctttgctgctgagagtgag
gaactgaagcagcgctggctcaaagtgatccgagtgtgtgtgacaggagaagtgcccaca
agcccgccacctacagagacacacgccgcagagagcagccgggagccgagcacggagagc
ctctaa
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