Pangasianodon hypophthalmus (striped catfish): 113534389
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Entry
113534389 CDS
T05759
Symbol
dennd4a
Name
(RefSeq) C-myc promoter-binding protein isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113534389 (dennd4a)
Membrane trafficking [BR:
phyp04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
113534389 (dennd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
DUF2464
PPR_long
PPR
TetR_C_14
Motif
Other DBs
NCBI-GeneID:
113534389
NCBI-ProteinID:
XP_026782934
LinkDB
All DBs
Position
Unknown
AA seq
1736 aa
AA seq
DB search
MEDKSPRVADYFVVAGLTESSEPFEEDITCDESCQRSSTQAEAPITDVAVVFRSQGEEVP
QGYTCIECTPSGLPAELNGGSIIGPQIFLCYRRGRDKPPLTDLGVLYEWREKLKPGCHII
QTTPSGRPANISSSSSQRIYITYRRAPECHSHATLAVTDICVIIPGKGETPPYAFCKVDK
NLNSSMWGSSVYLCYKKSLAKTNTLAFKAGLLSRYPEEDYESFPLPESVPLFCLPMGASI
ECWPSQTKYSLPVFSTFVLTGASGEKVYGAAIQFYEMYPEERLTDRQRTQLGLQESGLRA
EDSMMVHTNKSICLLSHWPFFDAFRTFLTFLYRYSISGPHTLPIEKHISHFMHKVPFPSS
QRPRILVQLSPHDNLMLSQPVSSPLPLSGGSLSTLLLNLGPKNAVTLLVLAVTEHKILVH
SLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAPCPFIVGVDSRYFDLYEPP
ADISCVDLDTNTISHKEDRRALTWKILPRKACKRLINTLSNLHQQLVQDYLLSREEGQID
AAMSERDPDSGEKSLQALEIEIQEAFLRFMAAILKGYRSYLLPITQAPSEKATDASSLFD
LQGFLKSRDRSHQKFYSLMTKTQMFIRFIEECSFVSDKDASLAFFDDCVDKLFGTEKGGK
VDSERPEDTRLIELDKSHRSEHTVFITPPELPPVPEGEEPSILYSYSGFPVLNAELCEPQ
EGPGIPMTTSNSRHTSPGSPAAIFRRSKQEIKSAQRMAKTYSSIPHMWSKCLLRHCHGLW
FICLPAYVAACHSKVRALRAAYDVLRMMQDKKLQPPDEVCYRILMQLCGQYGQPVLAVRV
LFEMKKAGVQPNAITYGYYNRAVLESTWPSSTRGGYFLWGKLRNVVRGVVQFKQVWRRQA
RHAKDPHLSDASDLDSVSHGSLDSTNDSAERASIDTDFTKMDSSDDGSSTGGQSDQGYDS
LSKEEVRLGGGEEQDSSPHMKEMKERDSIPLAKTGTSIKKDSSPALRPLYPSGVRDSASV
PKRPNSLDIFGKNTVRPSTLVLTSDQLLNVSEGCEQKQTYPDEEEVEEATGTTYPLKPAA
ERSTSCTVATETSISNAHCSVARSVSFSSTLGRVPQRTGIESGFDPLSLLAAERKAGKPD
EPGDTDDAPGTRRHLAEEIQLHMEHLSSPVSQRSLSTDLRSIQSSSPHSSPRQTAVPGSP
STQVQPQPRSRLFSSPSLPLGCPRRSKEARPTSLASPSSPTPSASSFSMESLLTPTLDVF
RSSFMSAGKGMAEKASRLYSRLSSQTSIAQASPNDLNSDRVSVSSLGSGEPDSSSLFEGE
LCPDPEGLSSPQRDASLSITPFKRSPNRNSCCLESPSAPPRLFRQASLLGSSLAVVKAPQ
TPDVCPDASPTPAQQNYDIEVRMSSCSRCNTCECLAYDEEIMAGWTADDSNLNSTCPFCG
SAFLPLLNVDIQDLTSQDRIPFQDLPSSQTEKNDASEIEEEPSSESTDSASNSASSSTEP
ITVPYLSPLVLWKELESLLENEGEQVISSPAIVDHHPIVFWNLVWFFRRLELPSSLPALI
LSSKHCSQNIQIDPQPLQSSASEDSKNVLVQILWDNPKLHQDPIPPCYMLWNAHCSNSNV
CVSSLLEEKQPVSLELLQSVVRSIQKNDVYQPMSQILQLLGTRLGFIRQRSLYRDILFLT
LVALGKNNINIDAFDREYKLAYDRLTPSQVKLTHNCDRPPGAGVMECRRTFGLPSL
NT seq
5211 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaaaagcccacgtgtagcagactactttgtggtggcgggcctcactgagtcc
tcagagccctttgaagaggacataacatgtgatgaaagctgccagaggagctcaacacaa
gccgaggctccaatcacagatgtggcggtggtgtttcgctctcagggcgaggaggtgccg
cagggctacacctgcatcgagtgcactccctcgggccttcccgctgagctgaacggaggc
agcatcattggcccacagatcttcttgtgctacaggcgaggacgagacaagcctcctctc
actgaccttggtgtcctctatgagtggagggagaagttgaagcctggatgtcacatcatc
caaaccacaccttccggtcgccctgccaacatcagcagctcttcctcacagagaatctac
atcacataccgccgtgcgcccgagtgtcattctcatgccacgttggccgtcacagatatt
tgtgttatcattcccggcaaaggagaaacaccaccatatgccttctgcaaagtggacaaa
aacctgaacagcagcatgtgggggtcctctgtgtacctgtgctacaaaaagtctttggcc
aaaacgaacactcttgcattcaaagcaggcctgctgtcacggtacccagaagaggactat
gaatcgttccctttgcccgagtcagtgcccctcttctgtctgccaatgggagcatccata
gagtgctggccgtctcaaacgaaatactctctccctgtattctcgacatttgttctcact
ggagcttctggagagaaggtttatggtgcagcgatccagttttacgagatgtacccagaa
gaacgtctgactgatagacagcgcacacagctgggcctgcaagaaagtggcctaagggct
gaggactccatgatggtccacaccaacaagagcatctgccttctttctcactggcccttt
ttcgacgctttccgcactttcctcaccttcctctaccgctactcaatttctgggcctcac
acattgcccattgagaagcatatctctcattttatgcacaaagttcctttcccatcttct
caaagaccacgcattctggtccagttatctccacacgataacctcatgctgagccagcct
gtctcctctcctctgcctctgagtggtggaagtctctccacgctgctgctaaacctgggt
cctaaaaacgctgtaactctgctggttctggctgtgaccgagcacaagattctggtgcat
tcactgcggccagctgtgctaaccagtgttaccgaggctctggtgtcaatgatctttccc
ttccactggccatgcccatacattcccctgtgcccgctggcgctggccgatgtgctcagc
gctccatgccccttcatagttggtgtggactcacgctattttgacctgtatgagccacca
gccgacatcagctgtgtggacctggacaccaacaccatctcacacaaagaagatcgccga
gccctgacatggaagatcctgccaaggaaagcctgcaaacgtctgatcaacaccctcagc
aatctccatcagcagctggtgcaggattatttgctgagtcgtgaggaaggccagatagat
gcagctatgagtgagcgagaccctgacagcggggagaagagtctccaggcgctggagata
gagatccaagaagccttcctgcgcttcatggcagccatcttaaagggttaccgctcctac
ttgcttcctattactcaggctccctcagaaaaagcaactgacgccagctctctctttgac
ctgcaaggattcttaaagagccgtgatcgctctcatcagaagttttactccctcatgacc
aagactcagatgttcatccgctttattgaggagtgctcctttgtcagtgataaggatgca
agcttggcattttttgatgactgcgtagacaagctctttggcacagaaaagggaggaaag
gttgacagtgagaggccggaagacaccagacttattgagttggacaaatcacatcgcagt
gagcacacggtgttcatcacacctccagagcttcctcctgtgcccgagggagaggagcca
tccatactttatagctacagcggctttcccgtgctgaatgctgaactctgtgaaccccag
gagggcccaggcatccctatgacaacctcaaactccagacacaccagccctgggagccca
gctgccattttccgccgctccaaacaggagattaaatcagcccagcgcatggccaagaca
tactcatccatacctcacatgtggtccaagtgtctgctgcgccactgccatggcctgtgg
ttcatctgcctgccagcctatgtagcagcgtgccactctaaggtgcgggcactccgagct
gcctacgatgtcctgaggatgatgcaggacaagaagctgcagccacctgatgaggtgtgt
taccggatcctgatgcagctctgtgggcagtacgggcagccagtgctggctgttcgggtg
ctgtttgagatgaagaaggctggagttcagcccaatgccataacatacggatattataat
agagcggtgttggagagcacatggccttcgtccactagagggggctatttcctgtggggt
aaactgcgcaacgtggtccggggtgtggttcagttcaaacaagtgtggaggagacaagct
agacatgccaaagatccccatctctcagacgccagtgatctggacagcgttagccacggc
agtctggacagcacgaatgactcagcagagagagcctctatcgatactgacttcaccaaa
atggactccagcgatgatggatccagcacaggtggacaatcagatcagggctatgactca
ttgtctaaagaggaggtgcggctggggggaggagaagagcaagacagctctcctcacatg
aaggagatgaaggagagagacagcattccactggccaagacaggaacatctataaaaaag
gactcatctcctgcactgagaccactatatccctcaggtgtaagggacagtgcatctgta
cccaaacgtcccaactcactggacatctttggaaaaaatactgtgaggcccagtacatta
gtgctgacatctgatcagctgctgaatgtctctgaagggtgtgaacagaagcaaacttat
ccagatgaagaggaggtagaggaagcaacaggcaccacatacccactcaaacctgccgca
gagaggagcacaagttgcacagttgccacggagactagcattagcaatgcacactgcagc
gtggcacggagcgtgagcttcagcagcactctaggtcgtgtgcctcaacgaacagggatc
gaatctggctttgatccgttgtcccttctggcagctgagagaaaggccggcaagccagat
gagccaggagatacagatgatgcccctggcacacgccgtcacctggctgaggagatccag
cttcacatggagcacctgagcagccctgtgagtcagcgttcactcagcacagatctacgc
agtatccagagctcctcgccacacagctcgcctcgccagactgctgtgccaggatcgcca
agcacccaggtgcaaccccagccccggagcagactgttctcctcgccctcactgccactg
ggatgtccacgtaggagcaaggaagcccggcccacctcattagcatcaccctcctcaccc
accccttctgcctcctccttctccatggaatccctgctcacacctacactagatgtcttt
aggagcagcttcatgtctgcaggcaagggcatggctgagaaagctagccgtctctattca
aggctctcctcacagacttccattgcacaggcgagtccaaatgacctgaactctgatcgg
gtcagcgtgtcttcactgggctcaggtgagcccgacagctcctctctgtttgagggtgaa
ctctgtcctgacccagaaggtctttcctccccccagagagatgcctctctcagcatcact
cccttcaaaaggagtccaaacaggaacagctgctgcttagagagtccttctgcacctccc
aggcttttccgccaggcctcactcctcggatcgtcactggcagtagtgaaagccccacaa
accccagatgtgtgtcctgatgccagccccacaccagcccagcaaaattatgacatagag
gtgcgcatgtccagttgctcacgctgcaacacctgcgagtgcctggcgtatgatgaggag
atcatggctggctggacagctgatgactccaatttgaatagcacttgccctttctgtggc
tcagccttcttgcccctgcttaatgtggacattcaagacttgaccagccaggacagaatt
ccttttcaagacctgcctagttcccagacggaaaaaaatgatgcttcagagattgaggag
gagccaagcagtgaatccacagacagtgcctccaacagtgctagcagtagcacagagcca
atcaccgtgccctacttgagtcctctggtgctgtggaaggagctggagagcctcttggag
aacgagggcgagcaggttatctcctcaccagccattgtggaccaccaccccattgtcttc
tggaatctggtgtggtttttccgcaggctggagctgcccagcagcctgcctgccctcatc
cttagctccaagcactgcagccagaacattcagattgatccacagcctctccagagcagt
gcctcagaggacagtaagaatgtgttagtccagattttgtgggacaaccccaaactgcac
caggaccctatcccaccctgctacatgctgtggaatgcacactgttcaaactctaatgtt
tgtgtctcctccttgctggaggagaaacagcctgtgagcctggaacttctccagagtgtt
gtcaggagcattcagaagaacgatgtctaccagcccatgagccagatacttcagctgctt
ggtacaaggctaggattcatcaggcaacggagcctgtatagagatatcctattcttgacg
ttggtggcattgggcaagaacaatatcaacattgatgcttttgaccgtgagtacaagttg
gcgtatgatcgactgacccccagccaggtcaagctgactcacaactgtgaccgcccgccc
ggcgctggagtcatggagtgtaggaggacttttgggctgccgagtctgtga
DBGET
integrated database retrieval system
