Pangasianodon hypophthalmus (striped catfish): 113534461
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Entry
113534461 CDS
T05759
Symbol
nedd4
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4 isoform X1
KO
K10591
E3 ubiquitin-protein ligase NEDD4 [EC:
2.3.2.26
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04120
Ubiquitin mediated proteolysis
phyp04144
Endocytosis
phyp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113534461 (nedd4)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113534461 (nedd4)
09144 Cellular community - eukaryotes
04530 Tight junction
113534461 (nedd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113534461 (nedd4)
04121 Ubiquitin system [BR:
phyp04121
]
113534461 (nedd4)
03029 Mitochondrial biogenesis [BR:
phyp03029
]
113534461 (nedd4)
Enzymes [BR:
phyp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
113534461 (nedd4)
Membrane trafficking [BR:
phyp04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
113534461 (nedd4)
Ubiquitin system [BR:
phyp04121
]
Ubiquitin ligases (E3)
HECT type E3
113534461 (nedd4)
Mitochondrial biogenesis [BR:
phyp03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
113534461 (nedd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WW
Motif
Other DBs
NCBI-GeneID:
113534461
NCBI-ProteinID:
XP_026783092
LinkDB
All DBs
Position
Unknown
AA seq
1241 aa
AA seq
DB search
MARRLRLHFAARRSNTDPLSESCSHEVEDGLGTPARSPAEPLTHPNSFHMKVTPGQLALG
LPPLSPDYGSLQRHTTVFVPKVNSSGGNRKSTLQISLHSSSRQNLDIEGCSGGGEETDPG
ICDGSAGGSSDGGSCSSSTASDVGYCSSNSIFDSDVAERKTSHDKGVCRRRTKAPLRRCS
SLVIFPRSPCNTPPASPVSPVATPLLPPSTRGPFQTSHQLQLSATDSSLDEPKVSVASAV
NGVRLSKSSCQPAEVRDARPILHFSFSTDSAIRSEQPERHSSVLVHSANQPPLPPGKGNA
ARTVVNIDCSKASEKSEEANTKLGNRNPKLCRSTSACMLLTEKRHHTCPTIGKSNAPQEI
GFHRGLQRSISLEVPFLNTGISCHLSNTKQLSCMNGAAHVHIHVSRGNGVKASDSPKDTS
TSDKKEQALTNSGTRDDFLGQVDVPLHQIPTEAMGSERPYTFKDFLLHPRSHKSRVKGHL
RLKMTYLPKNNGSEEEQTEQVEEVDPGWEFLESQDVCGPCQPHQLPALPPGWEERQDNLG
RTYYVNHENRTTQWHRPTIQDVQREAEQRQSTHVQLPFITRRQISDHDENNERRESPESW
EIITEDEGTLYSSQNQVSPPPPHSPLDYTTFSEEFCRLQTGSERRTSVPGHGSRRGSAPL
LTVEEHPVHPVMLPTTPGLPPGWEEKQDSKGRVYYINHKSRTTTWTRPLVQLIQPAEGAA
SSPAGVCGRSPSPTVYAPPQASPQASPLHSPGPQHTHNFEFTGSMPPGWEVRSAPNGRPF
FIDHNTKSTTWEDPRLRIPVHMRKQASLDPNDLGPLPPGWEERVHSDGRIFYIDHNTKTT
QWEDPRLQNSAITGPAVPYSRDYKQKYEYFRKKLKKPGDIPNRFEMSVRRNALLEDSYRR
ILSVKRPDLLKARLWVEFAGERGLDYGGVAREWFFLISKEMFNPYYGLFEYSALDNFTLQ
INPNSGLCNEDHLSYFKFIGRVAGMAVYHGKLLDAFFIRPFYKMMLQKPITLQDMESVDS
EYFNSLKWILENDPTDLDLRFTIDEELFGQTHQHELKPGGADIVVTDSNKKEYIHLVMQW
RFVNRVQKQMSAFKEGFYELIPQDLIKIFDENELELLMCGLGDVDVNDWRENTKYKNGYG
PNQPVIQWFWKAVLLMDAEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQLFTIEQWGTRD
KLPRAHTCFNRLDLPPYESFEELREKLNIAIENTQGFDGVD
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atggcacgccgtctgcgcctgcattttgccgcgaggagaagcaacaccgaccctctgtct
gaaagctgcagccatgaggtggaggacgggcttgggacacctgctcggagccctgcagag
cccctgactcaccccaactcatttcatatgaaagtgactccagggcagctggctctcggt
ctgccacctctgtcaccagattatggcagcctgcaacgccatactactgtatttgtaccc
aaggtgaacagcagtggcgggaacaggaagagcacgctgcagatttccttgcattcttcc
agcaggcagaatttggatatagaaggttgcagtggcggtggagaggaaacagaccctggg
atttgcgatggcagtgctggaggcagctctgatggggggtcgtgtagcagcagcacagct
agtgatgttggatactgcagcagcaacagcatattcgattcggacgttgctgagcgtaag
acgtcccatgataaaggcgtatgccgtcggaggaccaaggctcccttgcgccgctgctcc
tcgttggttattttcccacgtagtccctgcaacacaccgccggcttcacccgtcagtccc
gtggcaactcctctgcttcccccgtccacccgaggaccttttcagacctcgcaccagctg
cagctgtctgcaacggattcgtctctggacgagcccaaggtctcagtcgcctcagcggtg
aatggcgtgagactttccaagagtagctgtcagcccgctgaggttcgggatgccaggccc
atcctgcattttagcttttcgactgactcggcaataagatctgaacaacccgaaaggcac
tccagtgtcctggtgcactctgcaaaccagcccccgcttccacctgggaaaggaaacgcg
gccagaactgtggtcaacatcgactgctctaaagcctcggaaaagtcagaggaagccaac
actaaacttgggaaccgtaatccgaagctgtgccgtagcacctcagcctgcatgcttctc
acggagaagagacaccacacatgtccgactatcggcaaatcgaacgcgcctcaggaaatc
ggttttcaccgaggcttgcagaggagtatttccctcgaggtgcccttcttgaacactggg
atatcatgccatttgtccaacacaaaacagctcagctgcatgaatggagcggcacatgtg
catatacacgtgtctcgagggaatggtgtgaaagcgtccgactcgccaaaggataccagc
accagtgataaaaaggagcaggctcttaccaactctgggacgcgtgatgattttctgggt
caggtggacgttcctctgcatcagatcccaacagaagcaatgggcagcgagagaccgtac
acatttaaagactttctgctccatccaagaagccacaagtcaagggtcaaaggtcacctg
aggctaaagatgacctacctgcccaagaacaacggttctgaggaggagcagacggagcag
gtcgaggaagtggaccccggttgggagttcctggagagtcaggatgtgtgcgggccgtgc
cagcctcaccagctgcccgcgctgccccctggctgggaggagaggcaggacaacctcggc
aggacctactacgtcaaccacgagaaccgcaccacacagtggcacagacccactatccag
gacgtgcagagagaggcagagcagaggcagagcacacacgtacagcttcctttcatcaca
cgccgacagatctctgaccatgatgagaacaacgagcgcagagagtcgcccgagagttgg
gagatcatcactgaggatgagggcactctgtacagcagtcagaatcaggtctctccccct
cctcctcactcaccgctggattacacgactttctccgaggagttctgcaggttacagaca
ggcagcgagaggcgcacctctgtcccgggccatggcagtcgcagagggagcgcgccgttg
ctgactgtagaggagcatccggttcatcctgtgatgctgcccacgactccgggtttgccc
cctggctgggaggagaagcaggacagtaagggtcgagtttattacatcaaccacaagagc
agaaccaccacctggaccaggccacttgtccagttgatccagccggctgaaggagctgcc
tcgtctccagcaggagtgtgtggtcgctctccgagccccacggtgtacgcaccgccccaa
gcctcgccccaagcctcgcccctgcactcgcccggcccacagcacacacacaactttgag
ttcacaggctccatgcctccaggctgggaggtccggagcgctccaaacggccggccgttc
ttcatcgaccacaacaccaagagcactacatgggaagaccccaggttgaggattcctgtt
cacatgaggaaacaagcctcgctcgaccccaacgacctcggcccgctgccgcctggctgg
gaggagagggttcacagtgacggaagaatcttctacatcgatcacaatactaagaccacg
caatgggaagatcccagactgcagaactctgccattaccggaccagccgtgccttactcc
agagactacaagcagaagtacgagtatttccgcaagaagctcaagaaaccaggagacatc
ccgaatcgtttcgagatgtccgtgagacggaatgctcttctggaagactcgtaccgccgc
atcctgtccgtcaaacgacccgacctcctcaaggcccgcctctgggtggagtttgcaggg
gagagggggctggattacgggggcgtggccagagagtggttcttcctcatctccaaggag
atgttcaacccttattacgggctgtttgagtactctgctctggacaacttcacgctgcag
atcaacccaaactcaggcctctgcaacgaggatcatctctcctacttcaaattcatcggg
cgtgtggcggggatggccgtctaccacggcaagctgctggacgcatttttcattcgaccg
ttctacaagatgatgctgcagaagccaatcacattacaggacatggaatctgtggacagc
gagtactttaactctctgaaatggatcctggagaacgaccccactgacctggacctccgc
ttcaccatcgacgaggagctctttggacagacgcaccagcacgagttaaagccaggcggc
gctgacatcgtcgtcaccgactccaacaagaaagagtacatccaccttgtgatgcagtgg
aggtttgtgaaccgggttcagaagcaaatgtccgccttcaaggagggcttctacgagctc
atcccgcaggacctgattaagatcttcgatgagaacgagctggagctgctgatgtgtggt
ttgggggacgtggacgttaacgactggagagaaaacaccaagtataagaacggctacggg
cccaaccagcccgtcatccagtggttctggaaggctgtgctgctgatggatgcggagaag
cgaatccggttgctgcagtttgtgacgggaacgtctcgcgtgccgatgaacggttttgct
gagctctatgggtccaacgggccgcagttattcaccatcgagcagtggggaacccgagac
aaactgccccgagctcacacatgttttaaccgtctggatctgcctccgtacgagtcgttc
gaggagctccgtgagaagctgaacattgccattgagaacactcagggcttcgacggagtc
gactag
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