Pangasianodon hypophthalmus (striped catfish): 113534514
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Entry
113534514 CDS
T05759
Symbol
siah1
Name
(RefSeq) E3 ubiquitin-protein ligase SIAH1 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04115
p53 signaling pathway
phyp04120
Ubiquitin mediated proteolysis
phyp04137
Mitophagy - animal
phyp04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113534514 (siah1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
113534514 (siah1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
113534514 (siah1)
09143 Cell growth and death
04115 p53 signaling pathway
113534514 (siah1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113534514 (siah1)
Enzymes [BR:
phyp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113534514 (siah1)
Ubiquitin system [BR:
phyp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
113534514 (siah1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Trm112p
Motif
Other DBs
NCBI-GeneID:
113534514
NCBI-ProteinID:
XP_026783183
LinkDB
All DBs
Position
Unknown
AA seq
330 aa
AA seq
DB search
MSPTARLQPVYSWKGVFKLFTCVAARTASKPKEVHTFQEKKIALLGNHMDEEMSRQTATA
LPTGTSKCAPSQRVNTTASNSDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTCC
PTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHTDKAEHEELCEFRPYSCPCPG
ASCKWQGSLDAVMPHLLHQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFHFMLV
LEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIATAIM
NSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgtctcccaccgctaggctacagcctgtctactcatggaagggggtgttcaagctcttc
acatgcgtagctgcccgaacggccagcaagcctaaagaggtccacacatttcaagagaag
aaaatagccttactggggaatcatatggacgaagaaatgagtcgccagactgccaccgcg
ctgcccacaggaacctcaaagtgcgccccctcccagcgtgtgaacaccacagcctctaac
agcgacctagccagcctgtttgagtgcccggtgtgttttgactatgtgctgcctccaatc
ctgcaatgccagagcggccacctggtgtgcagcaactgccggcccaagctgacgtgctgt
ccgacatgccgcggcccattgggctccatccgtaacctggccatggaaaaggtggccaac
tccgtgctgttcccctgcaagtacgcctcgtcgggctgcgaagtgacgctgccacacaca
gacaaggccgagcacgaggagctgtgtgagttccggccatactcgtgcccatgtccgggt
gcttcgtgcaagtggcagggctcgctggacgccgtcatgccacacctgctgcaccagcac
aagtccatcaccacactgcagggcgaggacatcgtcttcctggccacggacatcaaccta
cccggtgccgtcgactgggtcatgatgcagtcctgctttggtttccacttcatgctggta
ctggagaagcaggagaagtatgatgggcaccagcagttctttgccatcgtgcagctgatc
ggcacgcgcaagcaggcagagaacttcgcctaccggctggagctgaacggccaccggcgg
cgcctcacctgggaagccacgccgcgatccatccatgagggcattgccacagccatcatg
aatagtgactgtctagtgttcgacacctcgatcgcccagctgtttgccgaaaatggcaac
ctgggcatcaacgtcaccatatccatgtgctga
DBGET
integrated database retrieval system
