Pangasianodon hypophthalmus (striped catfish): 113534599
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Entry
113534599 CDS
T05759
Symbol
polr3b
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03020
RNA polymerase
phyp04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
113534599 (polr3b)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
113534599 (polr3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phyp03021
]
113534599 (polr3b)
Enzymes [BR:
phyp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
113534599 (polr3b)
Transcription machinery [BR:
phyp03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
113534599 (polr3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
113534599
NCBI-ProteinID:
XP_026783305
LinkDB
All DBs
Position
Unknown
AA seq
1132 aa
AA seq
DB search
MELLKEDFGDMSPQQLAAPVDTVEEKWKLLPAFLKIKGLVKQHIDSFNYFINVEIKKIMK
ANEKITSDADPMWYLKYLNIYVGMPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYT
RGSQRIIRNALPIGRMPIMLRSSNCVLTGKTPMEFSKLNECPLDPGGYFIVKGQEKVILI
QEQLSKNRIIVEQDRKGAVGASVTSSTHEKKSRTNMIVKQGRFYLKHNTLSEDAPIGIIF
KAMGVESDQEIVQMIGTEEHVMAAFAPSLEECQKAQIFTQTQALKYIGNKVRRQRMWGGP
KKTKMEEARELLASTILTHVPVKEFNFRAKCIYLAVMVRRVILAQGNNKVDDRDYYGNKR
LELAGQLLSLLFEDLFKKFNSELKKIADQIIPKQRAAQFDVVKHMRQDQITNGMVNAIST
GNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCP
SDTPEGEACGLVKNLALMTHITTDMEDGPIIKLAFNLGVEDVNLLCGEELSYPSVFIVFL
NGNILGVIRDHHKLVNTFRLMRRAGFINEFVSISTNVTDRCVYISSDGGRLCRPYIIVKN
GQPAVKNKHIEELSQGYRSFEDFLHESLVEYLDVNEENDCSIALYEHMITKDTTHLEIEP
FTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLAYPQRPMVK
TKTIELIDFEKLPAGQNATVAVMSYSGYDIEDALVLNKASLDRGFGRCLVYKNAKCTLRR
YTNQTFDKVMGPMLDAETRKPIWRHSILDADGICSPGERVENKQVLVNKSMPTVTQTPLE
GSTQPSQPQYRDVPITYKGSTDSYIEKVMISSNAEDAFLVKILLRQTRRPEIGDKFSSRH
GQKGVCGLIVPQEDMPFCDSGICPDIIMNPHGYPSRMTVGKLIELLAGKAGVLDGRFHYG
TAFGGSKVKDVCEDLIRYGYNYQGKDFVTSGITGEPLEAYIYFGPVYYQKLKHMVLDKMH
ARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCG
QCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKLARYNE
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggagttgctgaaggaggactttggggacatgtctccccaacagctcgctgctccagta
gacacagtggaggaaaaatggaagttgcttccagcctttttgaagattaaaggcttggta
aagcagcacattgactcctttaactactttatcaatgtggagataaaaaagatcatgaaa
gcaaatgagaagattacaagtgatgcagatcccatgtggtatctaaagtacctcaatatc
tatgtcgggatgcctgatgtggaagagagctttaatgtcaccagaccagtgtctccacat
gagtgtcgactgagagacatgacgtactccgcccccattacagtggacatcgagtacacc
agaggcagtcagaggatcatccggaatgctttacccattggaaggatgccaattatgttg
cgcagttccaactgtgtgctgacaggcaagacacccatggagttctccaaactgaacgag
tgtcccttagatccaggtggctactttattgtgaaaggtcaggagaaagtcattctcatc
caggagcagttgtccaagaaccgcatcattgtggagcaagaccgcaagggcgcggtagga
gcctcggtgaccagttccacccacgagaagaagagtagaaccaacatgatcgtgaagcag
ggacgcttttacttgaaacacaacacactctctgaggacgctcccatcggcatcatcttc
aaggccatgggtgtggagagcgatcaggagatcgtgcagatgattggtacggaggaacat
gtcatggctgcttttgcccccagtttggaagagtgccagaaggctcagattttcacccag
acacaggctctgaagtacattggaaacaaagtacggcgtcagcgcatgtggggtggacca
aagaaaaccaagatggaggaagccagagagctgctcgcttccaccattctcacccacgta
cctgtgaaggagtttaacttcagagcgaaatgcatctacctggctgtaatggtgcgcagg
gtgattctcgctcaaggcaacaacaaagtggacgatcgcgattactatggaaacaagcgt
ctcgagctggctgggcagcttctgtctctgctgtttgaggatctctttaagaagtttaac
tctgagctgaagaagatcgctgaccagatcatacccaagcagagagcggcccagttcgac
gtggtgaaacacatgcggcaggaccagatcacaaacggcatggttaacgccatctctact
gggaactggtctctgaagaggtttaagatggacaggcagggggtgacgcaggtgctgtcg
cgtctctcatacatttcagccctgggtatgatgacacgcatttcctctcagtttgagaag
accaggaaggtgagcgggccgcgctccctgcagccctcacagtggggaatgctctgcccc
tcagacactcctgaaggagaggcttgtggtctggtgaagaatctggctctgatgacacac
atcaccaccgacatggaggatggacccattattaagctggcctttaacctgggtgtggag
gacgtcaatctgctgtgtggagaggaactctcctaccccagtgtcttcatcgtcttcctg
aatggtaacatcttgggagtgattcgagaccatcacaagctcgtcaacacattcaggctg
atgagaagagctggtttcattaacgagtttgtgtctatctccaccaatgtgacggaccgc
tgcgtgtatatctcctctgacgggggacgcctctgcagaccctacatcattgtgaagaac
gggcagccggctgtgaagaacaaacacatcgaggagctgtctcagggctacaggagcttt
gaggactttctgcacgaaagtctggtggagtatctggatgtgaatgaggagaatgactgc
agtattgctctgtatgaacacatgatcaccaaggacactactcatttggaaattgagccg
ttcactctgctgggggtttgtgctggtttgattccttatccccatcataaccagtccccc
aggaacacctatcaatgtgctatgggcaagcaggccatgggcactattggctataaccag
aggaatcgtatagacacactgatgtacctgttagcttatccacagaggcccatggtgaag
accaagaccattgaattgattgactttgagaagctaccagcaggtcagaatgccacggtg
gccgtgatgagctacagcggttatgatatagaggatgctttggtactaaataaggcctct
ctggacagaggttttggcaggtgtcttgtgtacaagaatgcgaagtgcacactaagacgt
tacaccaaccagacctttgacaaggtcatgggtcccatgttggatgcagaaacacggaag
cccatttggagacacagcatcctggacgctgatggcatttgctcccctggggagcgagtg
gagaataagcaggttctggtgaataagtccatgcccacagtcacccaaacaccactggag
ggcagtacccagccaagccagccacagtacagagatgtgccaatcacgtacaagggctca
acagactcgtacattgagaaggtgatgatctcttcaaacgccgaggacgcgtttctggtc
aagatcctgctccggcagacacgtcggcctgagataggagacaaattcagcagcagacac
ggccagaaaggtgtgtgtggactgatcgtccctcaggaggacatgccgttctgcgactcg
gggatctgcccagacatcatcatgaacccacatggatacccctccagaatgactgtcggg
aagctgattgagttattggctggaaaagcaggcgtgctggacgggcgttttcattatggc
acggcttttggaggcagtaaagtgaaggatgtgtgtgaggatcttattcgctatggatac
aactaccagggcaaagatttcgtcacatctggcattacaggtgaacctctggaagcctac
atctactttggtccagtgtactaccagaaactgaagcacatggtgttagataagatgcac
gcaagagcacgtggcccccgagcagtgctcaccagacagcctacggaaggtcgttcccgg
gacggaggtctgcgtctgggggagatggagagggactgtctgattggctacggggccagc
atgctgctgctagagcgcctcatgatctccagtgatgcttttgaagtggacgtgtgtggc
cagtgtgggctgctgggatactctggatggtgccactactgtaagtcctcatgccatgta
tcatctctgcgcattccctatgcctgcaagctgctcttccaagagctccagtccatgaac
atcatacctcgcctgaaactggctcgctacaacgagtga
DBGET
integrated database retrieval system
