Pangasianodon hypophthalmus (striped catfish): 113534631
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Entry
113534631 CDS
T05759
Symbol
fan1
Name
(RefSeq) fanconi-associated nuclease 1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
113534631 (fan1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phyp03400
]
113534631 (fan1)
Enzymes [BR:
phyp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
113534631 (fan1)
DNA repair and recombination proteins [BR:
phyp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
113534631 (fan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FAN1_TPR
VRR_NUC
Fan1_SAP
FAN1_HTH
PRP21_like_P
YhfH
zf-TRAF
Motif
Other DBs
NCBI-GeneID:
113534631
NCBI-ProteinID:
XP_026783354
LinkDB
All DBs
Position
Unknown
AA seq
987 aa
AA seq
DB search
MGPKPGRSKSKDHARPLRRLSIAKKDEQKGSAKQPKGPSITSFFRNTPPSKLACPLCGKF
IPRFKINEHIDSQCRDFLEENDVQAAAVHGSEQAKTYWPFSNNTPQSPDEKNASMHENNQ
DAETSPYFKKSGMTRQESPKKSFHAREGKIVSLGRLSSKLSKKVLVFSENSKVHSTQVSI
KEEPILSEPSSSQKENFDENVSVKSEHLVMNSALTSQVPTENLPDVEEIEQATPKVKSLG
PDASQTAETTASLRLMKRKKEESPGACVAPDMQKKTRYLGKRTAKSGSADPLPEIEVSKS
KCKDVERNQIMAPDRGSDLPQDASASFVEQSSPRRPYYLQNFLTVLGTVLENKDDRMLFS
EEELSSIQRFKQLSVPGQMLYVRLFQRKLKWLQVSKLDYAEISSDLNPVVQELVTSGFLQ
TESELTEIQDVLDLLPAPELRSLAKTFHLGGPGNSSQKQQLVEGLLHLSKQRSLFSLAPG
QSNTGAVILKRAKQLLGSCVFLCREPRAMFSRVLLLFSLTDTLEEEEMASGGQGQLYTIL
LVNSGRLAFPAYTVQRSAQMFRDREDLIRYEAAMRTLQEVITAMQAGCWEDALVLYTSAK
SNWQNLKQNYDLSWQEQLPVFLRCFTVGWAYTRILSRGVEILQRLRRYKDAVDELRSLLS
QSVFCPDSRGRWWDRLALNLQQHLKCHEQAIYAIRDGLNDPLVRTGHRLSLHQRATRMKD
SASFKKYRLLLRDLPSIHVHSVNHVTIRGQLFPHEGGMGKSVFLRPAAGHEDSGEGGDAM
VICSVEELALAHYRELGFDQGIHGEGSTFSTLFGLLMWDIVFMNVLDVFRTSYQTCPLDL
YTDCFYENRKEAIEARAELLSEASTETLQDLLAEVWNSQEGRVCALVNWERFSCLQQAQS
LVACLGGQFLSGVVLRMAKDYRHSKGGLPDLVVWNTSNYSYKLVEVKGPNDRLSQKQQIW
LDELQKLGADVEVCHVTAIGARGARLD
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgggtcccaagcctggtagaagcaaatcgaaagaccatgccagacccctaagaagactt
tccatagcaaagaaagatgagcagaagggcagtgcaaaacagcctaaagggccttctatt
acttcatttttcaggaacacaccaccttcaaaactggcctgcccgctgtgtggcaagttc
atacctcgcttcaaaatcaatgaacacatcgactctcagtgtcgagactttcttgaggaa
aatgacgtacaggcagcagcagtccatggcagtgaacaagcgaaaacatattggcccttt
tcaaataataccccacagagtccagatgagaaaaatgcaagcatgcatgaaaataatcag
gatgcagaaacaagcccatattttaaaaagagtggcatgacaagacaagagtcacctaag
aaaagtttccatgccagagagggcaagatagtcagtcttggtcgtttgtcttcaaaactc
tccaaaaaagtgttggtcttttcagagaactccaaagttcacagcacccaagtgtctatc
aaagaagagccaatcttaagtgagccaagtagctcacaaaaagaaaactttgatgagaat
gtaagtgttaaatctgagcacctagtgatgaattcagcattaacttctcaggtaccaact
gaaaatctacctgatgttgaagaaattgaacaggccacaccaaaagtaaaatcattgggt
cctgatgcctctcaaacagcagaaacaactgcttcattgagattaatgaaaaggaagaaa
gaagagtctcctggtgcatgtgtagccccagacatgcagaagaaaacacgatatttaggg
aagagaactgccaaatctggcagcgctgatccattaccagagattgaagtcagcaaatcc
aaatgcaaggatgtagaaaggaaccagattatggcaccggatagaggtagtgatcttcca
caggatgctagtgcctcctttgtggaacaaagttcacccagacggccatactatcttcag
aacttcctgactgttctgggaacagtgctggagaataaggatgacagaatgctcttcagc
gaggaggaactctcatctatccagaggttcaaacagctgtcagtgcctggacagatgcta
tatgtgcgtctgtttcagaggaagttgaaatggctgcaagtgagcaaactagattatgct
gagattagttcagacctcaatcctgttgtgcaagaacttgtcaccagtggcttcctccag
acagagtctgaactcaccgagatccaagatgtattggatcttctacctgctccggagctc
cgaagtctggccaagactttccacctaggaggtccagggaatagtagccagaaacagcag
ctggtggaagggcttctccatttgtccaaacagcgctctctcttttctcttgcccccggc
caaagcaacactggtgcagtcattctcaaaagggcgaaacagctacttggctcctgtgtt
tttctgtgtcgggagcctcgcgctatgttctcccgcgtccttctacttttctcccttact
gacactctggaggaggaagagatggcatcagggggtcaaggccaactctacactattctg
ctggtcaactctggacgtctggctttccctgcttacacagttcagcggtctgcccaaatg
tttagggacagggaagacttaatcagatacgaagctgccatgcgaacccttcaagaggtg
attacagctatgcaggctggttgctgggaggatgctctagtcctctacacttctgcaaag
tctaactggcaaaacttgaagcaaaattatgacttaagttggcaggagcagttaccagtg
ttcctgcggtgcttcacagtagggtgggcatatacacgtatattgtctcgaggagtcgag
atactacagaggctgcgtcgttataaggatgcagtggatgagctgcggtctcttctgtct
cagtcagtgttctgtccagacagcagagggcgctggtgggacagactggcactcaatctc
cagcagcacctcaaatgccatgagcaggctatctacgccatcagggatggattgaacgat
ccactggtccgtacaggtcaccgtttgtctctgcaccagagagccaccagaatgaaggat
tcagcgagttttaagaagtaccgcctgctgctccgagaccttccttctatccatgtgcac
agtgttaatcatgttacaattcgaggccagctttttccgcatgagggtggtatgggcaaa
tccgtgttcctcaggcctgctgctgggcatgaagactctggagaaggaggtgatgccatg
gtcatatgctctgtggaggagctggctttggcacactacagagaacttggcttcgatcaa
ggcattcatggtgaaggttctacattctccactttgtttggccttctgatgtgggacatt
gtcttcatgaatgtcttggatgtcttcagaacatcctatcagacatgtcctctggacttg
tacactgactgtttctatgagaatcggaaggaggctatcgaggctcgggctgagctgttg
tccgaggcgtccacagaaacattgcaggacctgctggctgaagtgtggaattcacaggag
ggaagagtttgtgcacttgttaactgggagagattctcttgtcttcagcaagcccagagc
ttagtagcatgtctgggaggacagtttttaagtggagtggtccttagaatggcaaaggac
tacagacacagcaaaggaggacttcctgacctggttgtatggaacacctcaaattacagc
tataagctggtggaggtgaagggccctaatgaccgtctgtcccagaaacaacagatctgg
ctggatgagctgcagaagctgggcgctgatgttgaagtgtgtcacgtcactgctattgga
gctcgaggagcccggctggattag
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