Pangasianodon hypophthalmus (striped catfish): 113534656
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Entry
113534656 CDS
T05759
Name
(RefSeq) heat shock factor protein 1-like
KO
K09417
heat shock transcription factor 4
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113534656
Transcription factors [BR:
phyp03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
113534656
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSF_DNA-bind
Vert_HS_TF
YscO
CTD12
DUF6212
LRRFIP
Motif
Other DBs
NCBI-GeneID:
113534656
NCBI-ProteinID:
XP_026783404
LinkDB
All DBs
Position
Unknown
AA seq
435 aa
AA seq
DB search
MQESPGSIGVDGGYANNVPAFLTKLWTLVEDPETNHLICWSTTGTSFHVFDQGRFAKEVL
PKYFKHNNMASFVRQLNMYGFRKVVNIEQSGLVKPERDDTEFQHLYFLQGHEHLLEHIKR
KVSIVKSEETKFRQEDLSKLLYEVQVLRSQQENMECQMQDMKQQNEVLWREVVSLRQNHT
HQQKVMNKLIQFLFSQMQASPPNTVGMKRKLPLMLDDGSTTPPTSKLSHSQSMESIQEAF
YIQSPSTEAASCSTSNTMTVGPIISDVTDMSQPSAMAIQMEEARERCPMIIKEEPVSPGV
HRWSEDVSCGVCTEPPILPLAMVQSVLEGRGPGSGERRAKRTMDRPETSEAVENVDMSFE
ELQLLLRSHQQSMESSSANVDTFTFSMPMNEWNFTEMDPNLKSELANILVPAAMSQYMFQ
CQEGEVCNANGCEEQ
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagtcaccgggttccataggtgtggatggaggctatgccaacaacgtgccggca
ttcctcaccaagctgtggacgctggtggaagacccggagaccaaccatctcatctgttgg
agcactactggtaccagtttccatgtgtttgaccaaggcaggtttgccaaagaggttctg
cccaaatacttcaagcacaacaacatggccagctttgtgcgccagctcaacatgtatggc
ttcaggaaggtggtgaatattgaacagagtgggctggtgaagccagagagagatgataca
gagtttcagcacctgtacttcctccaaggccatgagcatcttctagaacacatcaagcgc
aaggtgtctatagtaaaaagtgaagagactaaattcaggcaggaggacctaagcaagctc
ctgtatgaagtacaggtgcttcgcagccaacaagagaacatggagtgccagatgcaagat
atgaaacagcagaacgaagtattgtggagggaagtggtgtcactgagacagaaccacaca
caccagcagaaagttatgaacaagctgattcagttcctgttcagccagatgcaggcgagc
ccccccaacacggtcggaatgaagagaaaattgcccctgatgttagatgatggctccacc
actcctcctacctccaaactcagtcacagccaatccatggagtccatacaagaggccttc
tacattcaatcgccatccacagaggctgcctcttgttccactagcaacacaatgacagta
gggccaatcatctccgatgttactgacatgtcacagcctagtgcgatggctattcaaatg
gaggaagcaagggaaagatgtccaatgattattaaggaagagccagtgagtccaggtgtg
cacaggtggagtgaggacgtttcttgtggtgtgtgtactgaaccccccattctccccttg
gccatggtacaatccgtcctagagggccgaggaccaggctctggagagaggagggccaag
aggaccatggacaggccagaaacttctgaagctgttgaaaatgtggacatgagctttgag
gagctacagctgctcctgagaagccaccagcagagtatggagtccagctctgccaatgtg
gatacatttacttttagtatgcccatgaatgagtggaacttcacagagatggacccaaat
ctcaaatcagagttggccaacatccttgtccctgctgctatgtctcagtacatgttccag
tgtcaggagggtgaagtgtgcaatgctaatggctgtgaggaacagtaa
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