Pangasianodon hypophthalmus (striped catfish): 113534716
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Entry
113534716 CDS
T05759
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113534716 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phyp03019
]
113534716 (dhx36)
03012 Translation factors [BR:
phyp03012
]
113534716 (dhx36)
Enzymes [BR:
phyp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
113534716 (dhx36)
Messenger RNA biogenesis [BR:
phyp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
113534716 (dhx36)
Translation factors [BR:
phyp03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
113534716 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
AAA_22
nSTAND3
AAA_19
ATPase
NB-ARC
TsaE
PhoH
PROL5-SMR
Sigma54_activat
AAA_25
AAA_16
Motif
Other DBs
NCBI-GeneID:
113534716
NCBI-ProteinID:
XP_026783473
LinkDB
All DBs
Position
Unknown
AA seq
734 aa
AA seq
DB search
MSYGYGRGRGRRGGGGGGGGGGGGERWSSDWEARDEQPRGGGGRGRHPPHLKGREIGLWY
AKWGGVKRAEAERKSRAVVQMDESREQHITQLLNSVQRDPSRDYEPSVPPYRQLKPEPSG
HSYFDGDDPPAEPQKMVKVAKIESVKVKEEEVEIKTTIKEERIDRDLEYLVQEIDRKPSL
DEELKCDLQSKRQNSKYLEMLTFREKLPSYSMREELVKLIQANSVVVVSGETGCGKTTQV
TQFILDDYIQRGMGSLCRVVCTQPRRISAISVAERVAAERAESVGEGKSCGYQIRLQSRL
PRKQGSVLYCTTGIILQWLRSDPCLSSISHLVLDEIHERSLHSDVLLTIVKDLLSLRDDL
KIVLMSATLNADKFSEYFDNCPMIHIPGHTFPVKEYLLEDVVEMLRFRPQQQQDRRPRFR
RGFMNGQNVRPEKQEKEAEYKESWPCFARTLRDRFSDSTIDVLEMMDEDDKINLELIVAL
IRHIVLKEDDGAILVFLPGWDNISSLNDLLIADQMFKSDKFVIIPLHSLMPTVNQTQVFK
RPPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMTAEWVSLANAKQ
RKGRAGRYRALSDSLSNAPYSLIFLYDCTEVSPFSLLFFGGDISIQKDQEQETIAVDEWI
VFQSPARIAHLVKNLKKELDLLLEEKIKQPRPVDWSDRTSKDCAVISAIIDLITTQESTT
SSQEPYRKSHQHWD
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgagttatggctacgggagaggaaggggccggagaggcggcggcggaggaggaggaggc
ggaggaggaggagagcggtggagctccgactgggaagcccgggatgagcagcctcgaggc
ggcggaggccgcgggagacacccgccgcacctgaaaggcagagagatcggactgtggtac
gccaagtggggaggcgtgaaacgagcagaagccgagaggaagtcgagagctgtagttcag
atggatgagtcgagagagcagcacatcacacagctgctgaattcggtccagagagatccg
tcgcgtgactacgagccgtccgtccctccgtaccggcagctgaagccagaaccgagcggc
cacagctactttgatggtgatgatcctcctgcagagccgcagaaaatggtgaaagtggct
aaaatcgagtcggtgaaagtgaaggaagaggaggtggagataaagactaccataaaggag
gagcgcatcgatcgagatctggaatacctggtgcaggagattgatcgaaagccttcactg
gatgaagagctgaaatgtgaccttcagagcaagagacagaattcaaaatatctggaaatg
ctgacatttagagagaagctgccttcctacagcatgagagaggagctggtgaagctgatc
caggccaacagcgtggtggtggtgagcggagaaaccggctgcgggaaaaccacgcaggtc
acgcagttcatcctggacgactacatccagcgtggcatgggctcgctctgcagggtggtg
tgcacacagccccgccgcatcagcgccatatcggtggctgagagggtggcggcggagagg
gcggagtctgtcggagaggggaagtcctgcggatatcagatccgtctgcagagccggttg
ccacggaaacaaggctcggtgctgtattgtacgacgggaattattcttcagtggctgcgc
tcggatccgtgtttgtccagcatcagtcacctggttctagatgagatccacgagcgcagt
ctgcactcagacgtcctcctcaccatcgtgaaggacctgctgagcctcagagacgacctc
aagatcgtgctcatgagcgccacgctgaacgccgacaagttcagcgagtacttcgataac
tgccccatgatccacatcccgggtcacaccttccctgtgaaagagtacctgctggaggat
gtggtcgagatgctcaggttccggccgcagcagcagcaggatcggcgtccccgcttcagg
aggggcttcatgaacggccagaatgtacggcccgagaagcaggagaaagaagccgaatac
aaagagagctggccgtgtttcgctcgcacactcagagacaggttctctgacagcaccatc
gacgtcctggagatgatggacgaggacgacaagatcaacctggagctgatcgtagcactc
atccgccacatcgtgctgaaggaagacgacggagccatcttggtgttcctgcctggctgg
gacaacatcagcagcctgaatgacctgctcattgctgaccagatgtttaaatctgataag
tttgtgatcattccactgcactccctgatgcctacggtcaaccagacgcaggtttttaaa
aggccacctcccggagtccggaagatcgtgattgccacaaacatagcagaaaccagtatc
actatagatgatgtggtgtacgtgatcgatggagggaaaattaaggaaactcacttcgac
acgcagaacaacatcagtacaatgacagcagagtgggtgagcctcgccaacgccaagcag
aggaagggacgcgccggcaggtacagagctctctctgattctctctctaatgcaccctat
tctctcatctttctgtatgactgcacagaggtgtctccgttctctctcctcttcttcggt
ggtgatatctccatccagaaggaccaggagcaggagaccatcgcagtggacgaatggatc
gtcttccagtctcctgctcgcatcgctcacctggtgaagaacttgaagaaggagctggat
ctgctgctggaggagaaaatcaagcagccacgcccggtggactggagcgaccgcacctcg
aaagactgcgctgtgatctcggccatcatcgacctcatcaccacgcaggagagcacgacg
tcttcacaagagccgtacaggaaaagccaccagcactgggactag
DBGET
integrated database retrieval system
