Pangasianodon hypophthalmus (striped catfish): 113534764
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Entry
113534764 CDS
T05759
Symbol
myo5a
Name
(RefSeq) unconventional myosin-Va
KO
K10357
myosin V
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
113534764 (myo5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phyp03019
]
113534764 (myo5a)
04131 Membrane trafficking [BR:
phyp04131
]
113534764 (myo5a)
03029 Mitochondrial biogenesis [BR:
phyp03029
]
113534764 (myo5a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
phyp04812
]
113534764 (myo5a)
Messenger RNA biogenesis [BR:
phyp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
113534764 (myo5a)
mRNA cycle factors
P-body specific factors
113534764 (myo5a)
Membrane trafficking [BR:
phyp04131
]
Others
Actin-binding proteins
Myosins
113534764 (myo5a)
Mitochondrial biogenesis [BR:
phyp03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
113534764 (myo5a)
Cytoskeleton proteins [BR:
phyp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
113534764 (myo5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_22
Myosin_N
HTH_17
Csm1_N
nSTAND3
AAA_16
Motif
Other DBs
NCBI-GeneID:
113534764
NCBI-ProteinID:
XP_026783517
LinkDB
All DBs
Position
Unknown
AA seq
1531 aa
AA seq
DB search
MAASELYTKYARVWIPDPEEVWRSAELTKDYKQGDTALYLQLEDGTDLEYKLDPKTKALP
HLRNPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYETLPIYG
TDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYF
ATVSGSASEANVEEKVLASNPIMEAIGNAKTTRNDNSSRFGKYIEIGFDKRYHIIGANMR
TYLLEKSRVVFQADEERNYHIFYQLCASSHLPEFKTLKLKRTEVEYQCEGFLEKNKDTVN
EEQINVLKASKKFDLLVELFQDEDKVTSPTGSGPAPGGRTRLSVKPDKGKPDQASKEHKK
TVGLQFRNSLQLLMETLNATTPHYVRCIKPNDHKYAFTFDPKRAVQQLRACGVLETIRIS
AAGFPSRWTYQEFFSRYRVLMKQKDVLADKKMTCRNVLEKLVQDQDKYQFGKTKIFFRAG
QVAYLEKLRADKLRAACIRIQKTIRCWLERKKYLRMKQAAIVIQRYVRGYQARCLAMFLR
RTRAAIVIQKYQRMYVQRTSYRRKRNAALAMQCILRAYMARQQYKALLREHKAIIIQKMV
RGWLARQWYKRSLDAVVYLQCCVRRMRAKRELKKLKIEARSVEHYKKLNIGMENKIMQLQ
RRIDEQNKENRILGERLSGLETAHATESERLRKELTRLRGVEEEARNSANRVTTLQEELE
KLRKELQSTQKEKKAIEDWAQTYQDEMEKMISELKEQNDLLKNEKDDLNRLIQEQSQQWT
ERMQRALKEETTQLESDLNEERSRYQNLLTEHLRLEEKYDDLKEEISLSMNVPKPGHRRT
DSTHSSNESEYTYNSEFAEAEEGARGAEDVTKGVALDMALFLKLQKRVTELEQEKQGLQN
ELDRKEEQFQRARARDDEEHKKARGAELEYESLKRQELESENKKLRHNLSEMRQTLAGKD
GSTSAYKVLMEQLNSSNEELEVRKEEVLILRSQLVSQKEAMQHKDEKETMTEPLHYVEDV
HKLTDAKEISQAYMGLKDTNRLLESQLQAQRRSHEAELEALRGELHCVKEENQRQQQLLT
QNLQLPPEARIEASLQHEITRLTNENLEIMEQLEKQDKTVRKLKKQLKVFAKKINDLEGG
QVENVSPGQMADEPIRPVNIPRREKDFQGMLEYKKEDEVKLVKNLILELKPRGVAVNLIP
GLPAYILFMCLRHADYINDDQKVRALLTSIINSIKKILKVTITHTHTHTHTHTHTHTHTH
THTHXXXXXXLAEYRQVLSDLAIQIYQQLIKCMENILQPMIVSGMLEHETIQGVSGVKPT
GLRKRTSSVADEGTFTLDSIIRQLNSFHSTMCHHGNDPELIKQVVKQQFYIIGAVTLNNL
LLRKDMCSWSKGMQIRYNVSQLEEWLREKNLMVCGAKETLEPLIQAAQLLQVKKKTDEDA
EAICSMCNSLSTAQIVKVLNLYTPVNAFEERVSVTFIRTIQNRLRDRKESPQLLLDTKII
YPVTFPFNPSSLNLDTIQIPTSLNLGFLTRV
NT seq
4596 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgtccgagctctatacaaagtatgctcgggtgtggatccccgaccctgaggag
gtgtggaggtcagcagagctcactaaagactacaaacagggggacacagcactgtacctg
cagctcgaagatggcacggatctggagtacaagttggacccgaagactaaagccctgcct
cacctgcggaaccccgacatcctggtgggagaaaatgacctgacggctctgagttacctt
catgaaccggccgtgttgcacaacctgaaagtacgcttcatcgactccaaactcatctac
acctactgcggtattgtgttggtggccattaatccgtatgaaacgttgcccatctatggc
acggacatcattaacgcttacagcggccagaacatgggagacatggacccgcacatattc
gccgtggctgaggaggcctacaaacagatggccagagacgagaggaaccagtccatcatt
gtcagtggagagtccggcgcggggaagacggtttcagccaaatacgcgatgcgatacttc
gctacggtgagcggctcagccagcgaagccaacgtcgaggagaaagttctcgcctccaac
cctatcatggaggccataggaaatgccaaaaccaccaggaacgataacagcagccgcttt
gggaagtacatcgagatcggcttcgataagcgctaccacatcatcggcgctaacatgagg
acgtatctgctggagaagtcgcgagtcgtgtttcaggcggatgaagagaggaattatcac
atcttctaccagctctgtgcctcctcccaccttcctgagttcaagaccctgaaactcaaa
agaacagaagtggagtatcagtgtgagggatttttggagaaaaacaaggacacagtgaat
gaagaacagattaatgttctgaaggccagtaagaagtttgacctgctggtggagctcttc
caggatgaggacaaagtgacgagcccgacaggaagtggtcctgcccccggggggcgcact
cgcctcagcgtcaaaccagacaagggcaaaccggaccaggccagcaaggagcacaagaag
accgtgggcctgcagttccgtaactctctccagctgctgatggagacactaaacgccacg
acgccgcactacgtccgctgcatcaaacccaacgaccacaaatacgccttcacgtttgac
ccgaagcgggcggtgcagcagctgagggcgtgtggagtcctcgagacgatccgcatctcc
gctgcaggatttccgtccaggtggacctatcaggagttcttcagccgttatcgtgtgttg
atgaagcagaaagacgtcctggctgataagaaaatgacctgcaggaatgttctggagaaa
ctggtgcaggatcaggataagtaccagtttgggaagacgaagatctttttccgagcaggt
caggtggcgtatctggagaaactccgggcggataaactgcgagccgcctgcatccgcatc
cagaaaacgatccgctgctggctggagcgcaagaagtacctgcgcatgaaacaagccgcc
atcgtcatccagagatacgtccgaggataccaggcccgatgcctggcgatgtttctgcgc
cgcacccgagccgccatcgtcatccagaagtaccagcgcatgtacgtacagagaaccagc
tacaggcgcaaacgcaacgccgccctcgccatgcagtgtatcctccgagcgtacatggcc
cgacagcagtacaaagcgctgctgcgtgagcacaaagccatcatcatccagaagatggtg
cgcggctggttggcgcgtcagtggtacaagcgctctctggacgcggtggtgtacctgcag
tgctgcgtgcggcgcatgagggccaagcgcgagctcaagaagctgaagatcgaagcgcgg
tccgtcgagcactacaaaaaactcaacatcggcatggagaacaagatcatgcagctgcag
cgcagaatcgacgagcagaataaggagaaccggattctgggtgagcgtctgagcggtttg
gagaccgcccacgccaccgagagcgagcgtctgcgcaaggagctgactcgattacgcggc
gtggaggaggaggcgaggaacagcgctaaccgagtgactacgctgcaggaggagctggag
aagctgcgcaaagaactgcagagcacgcagaaggagaagaaggccatcgaggactgggcg
cagacctaccaggatgagatggagaagatgatttcagagttaaaggaacagaatgatctg
ttgaagaacgagaaggacgacctgaaccgtctgatccaggagcagagccaacaatggaca
gagaggatgcagagggctctgaaggaggaaacgactcagctggagagcgatttaaacgag
gagagatcacgatatcagaacctcctcacagaacacctgagactggaggagaaatacgac
gacctcaaagaggagatctcactcagcatgaacgtacccaaaccgggccacaggagaacc
gactccacacacagcagcaacgagtccgaatacacctacaactccgagttcgccgaggcc
gaggagggagcgcgaggagccgaggacgtaaccaaaggtgtagcgttggacatggctctg
ttcctgaagctgcagaagcgagtgacggagctcgagcaggagaaacagggcctgcagaac
gaactggaccgaaaagaggagcagtttcagcgggctagggccagggacgatgaagagcat
aagaaggctcgtggcgctgaactggagtatgaatctcttaagcgtcaggagctggagtcg
gagaataagaagctgagacacaacctgagcgagatgcgtcagactctggcggggaaagac
ggctccacgtcggcctacaaggtcctgatggagcagttaaactcctccaacgaggagctg
gaggtccggaaggaggaggtgctcatcctgcgctcacaactcgtcagccagaaagaagcc
atgcagcacaaggatgagaaggagaccatgacagagccgctgcactatgtggaggatgtt
cacaagcttacggatgctaaagagatctctcaggcttacatgggcctcaaggataccaac
aggctgttggagtcccagctgcaggctcagcggcgctcccatgaggccgagctggaggcg
ctgcgtggagaactgcactgtgtgaaggaggagaatcagagacagcagcagctcctcaca
cagaacctgcagcttcctcctgaggctcgcatcgaggccagtctacagcacgagatcaca
cgcctcaccaacgagaacctggagatcatggaacagctggagaaacaggacaagacggtt
cgcaagctgaagaagcagctcaaagtgttcgccaagaagatcaacgacctggaaggtggt
caggtggagaacgtgtctccaggtcagatggccgacgagccgatccgtccggtcaacatt
ccacgccgagagaaagacttccagggaatgttggagtacaagaaggaagacgaagtcaag
ctggtcaagaacctcattctggaattaaagccccgcggcgtggcagtgaacctgattccc
ggtttgccggcttacatcctcttcatgtgtttacgacacgccgactacatcaacgacgac
cagaaagtccgagcgctgctcacctccatcatcaacagcatcaagaagatcctcaaagtc
actatcacacacacacacactcacacacacactcacacacacacacacacacacacacac
acacacacacacnnnnnnnnnnnnnnnnacctggctgagtatcggcaggttctcagtgat
ctggccattcagatttaccaacagctcatcaagtgtatggagaatatcttgcagcccatg
atcgtctccgggatgctagagcatgagaccatccagggtgtgtcaggcgtgaagcccacc
ggtctgcgcaagaggacgtccagcgtagctgatgagggaacgttcacgctcgactccatc
atccgccagctcaactccttccacagtaccatgtgtcaccatggcaacgaccccgagctc
attaagcaggtcgttaagcagcagttctacatcatcggcgccgtcacactcaacaacctg
ctgctgcgcaaagatatgtgctcctggagcaagggcatgcagatcaggtacaatgtgagc
cagttggaggagtggttgagggagaagaacctgatggtgtgtggagcgaaggagacgctg
gagccactgattcaggcagcgcagttactgcaggtcaagaagaagacagatgaggacgct
gaggccatctgctccatgtgtaactcactgagtactgctcagatcgtgaaggtgttgaac
ctgtacacacctgtcaacgcgtttgaagagagagtgtctgtaacattcatacgaaccata
cagaatcgcctgagggatcgtaaggagtcacctcaactcctcctcgacacaaagattatc
taccctgtgacgttcccgttcaacccatcctccctcaacttggacaccattcagatccct
accagcctcaacctgggattcctcactcgcgtctaa
DBGET
integrated database retrieval system
