Pangasianodon hypophthalmus (striped catfish): 113534770
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Entry
113534770 CDS
T05759
Symbol
dmxl2
Name
(RefSeq) dmX-like protein 2
KO
K24155
rabconnectin-3a
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
113534770 (dmxl2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113534770 (dmxl2)
Membrane trafficking [BR:
phyp04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
113534770 (dmxl2)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
113534770 (dmxl2)
RAVE complex
113534770 (dmxl2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
WD40
ANAPC4_WD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
113534770
NCBI-ProteinID:
XP_026783522
LinkDB
All DBs
Position
Unknown
AA seq
2449 aa
AA seq
DB search
MHLHQVLTGAVNPGDCCYSVGSVNDIPFTSIHHLKQLRRGRRRSSALVTHTELLPSQLNS
HDTHRHITHHGNALCHFHISASINPNTDIPAALAGSGLFSSGDSNGGFVVHWLNNKDLSF
TSSMDVFMQHLRKFSEQNLEHTTDDIKQDGTAKFDFDLDEMSDKASEHDEGEQEGSTKAS
SPGSSSSLPPPSILLERKLESLTLEWNRSPDMLFTIHPVDGSFLVWHIKYLDEYIPGIFR
QVQVAFSSRIPVAFPTGDANSLSKNIMMYACTFPERGGEVSVELDRKCASLGTVIGPAVM
MVSKHVDGSLNQWAVTFAEKSAFSNVLTVSHKFRYCGHRFHLNDLACHTVLPLLLTSSHH
NAVLTPPSGQDDPQGAPSRPLRPSRGLTPKEMGSNAATRTFHDPNAIYSELILWRVDHIG
PLSCTGGVSEIARINSLHTAAFSNVAWLPTLIPSSVLGTYCNSASACFVASDGKNLRLYQ
AVVDARKLLDELSDPETSKLVGEVFNIVSQQSTARPGCIIELDIITNQCGSNTQLLHVFQ
EDFILGYKPHDDITDINTADFPSADEFQPPPFSEKFFLVVIEKDENRNSVLQMWHLHLKS
VHACVDDTPRDQPYQNQLTVPHMLTNADSSPESTPGQSPLPRSSSSANLQSASKLILSST
LVYSHRLELPLGVEVIRATPSAGHLSSSSIYPVCLAPYLIVTACSDGRVRFWRCGVDSED
SPSYRWEPWCLLNEAEDNNSALTVSGRPVAVSCSYTGRLAVAFKQLVPTEHSSSSKDFSM
HVSIFECESTGGSEWVLEQTIHLDDFGKPVSGLDPRISVDSNLVVYSKSDLFVRKQNPNI
KHFVHLDWLSKEDGSHILTVGVGSSILMYGRISGIVAEQTGGKDGMAVVTLPLGGSVKQG
VRSRWVLLRSVDLVSSVDGTPSLPVSLSWVRDGILVIGMDCEMHVYAQWYQDKKPSDSED
NDEAFMVKKSAIEMTDDVIRVPAVIQDGGLFEAAHSLSPTLPQYHPTQLLELMDLGKVRR
AKAILSHLVKCIAGEVAVVRDAVAGEGGARRHLSRTISVTGSTGKDTIVAGRDGGRDYTE
INSIPPLPLYALLSADLDTSYRNKLADDVIYQERETQKSSEDQYAELFQDPTVNTDDFAS
FAWADKAEKKEKKTRVIDLSHYGPTCFGPEHAQVLSSHLMHSSLPGLTRLEQMFLVALAD
TVATTSAEVGRATDKQYRGGEALDECGLRYLLAMRLHTCLLTSLPPLYRMQLLHQGVSTC
HFAWAFHSEAEEEMLNMIPAMQRGDLQWSELRAVGVGWWIRNINTLRRMVEKVAKAAFQR
NNDPLDAALFYLAMKKKAVLWGLFRSQHDEKMTQFFSHNFSEDRWRKAALKNAFSLLGKQ
RFEQSAAFFLLAGSLKDAIEVCLEKMEDIQLAMIIARLYEADFESSSTCQGILYEKVLGC
KRDGTEFSCSKMHPDPFLRSIAFWIMKDYTRALDTLLEQTPKEDDENPDVMVKSCNPMVF
SFYNYLRTHPLIIRRHFASPDGSERNSSADQINLIERKLFFTTANAHFKVGCPVLALEVL
SKIPKVTKKTSSLSKGASTANVSDVQNGVRASDLDWSQPVKKNDDDELKLDWGDDEDEEE
EEEEEEEDKKGLMMKEEKKEEEEEEEEEEKKASDWKVDVIAEQLKFRACLKILMTELRTL
ATGYEVDGGKLRFQLYNWLEKEIEAMHRICNYKVEGQGSVGELEKWSGSVSAEADECERR
SETDVYERHLQDRRRLQAKQLHAERRKAWLRKNEALLRVFLTYCSLHGAKGGGVTSVRME
LLFLLQESQQHCSVVSSQSEANQFTGMVYQGLLLSERRRLRTESIEEQATPTSAPAHWPG
VASLISLLACSQGEDQPRLNVMLCEAVVAVYLSLLLHGLGTHSTNELFRLAAHPLNARMW
AAVFGGGAKIIVKPKRLAEVTPVAPPPTPPAEEVDRQRRRFNMRMLVPGRPVKETQATPP
PIPTERPAYKEKFIPPELSMWDYFVAKPFLPLSDSGALYDSDESGDEDEEDDDDAFLSDT
QMTEHSDPNSYSLSRAKHRLSFPARRLWHFLVKQEVLQETLIRYIFTKKRKQSEVEADLG
YPGGKAKIIHKESDIIMAFAINKAKSSEIVLASTHDVQELDVSTLLAAQSYTWIGEDFDK
ESRSSDDDYRSSHTNIAQASSAPFAPPPMPVSASMPWLGSGQTSMGASVIVKRNLNNVKR
MTSHPIYQYYMTGAQDGSVRMFEWNRPQQLICFRQAGNARVTRLYFNSQGNKCGVADGEG
FLSLWQVNQTSSNPKPYLVSGEMCVPLAFTCHENGATVLQYAPKQQLIISGGRKGFVCIF
DIRQRQLLHTFQAHDSAIKALALDASEDFFITGSAEGNMKVWKLAGHGLMHSFSTEHAKQ
SIFRNIGAGVMQIETCPGNRIFTCGADGTLKMRVLPDRYNTPSSIFDIL
NT seq
7350 nt
NT seq
+upstream
nt +downstream
nt
atgcatctccaccaggtgctgacgggagccgtgaatccgggagactgctgctactcggtg
gggagcgttaacgacatcccgttcacgtcgatccaccacctgaagcagctcagacggggt
cggaggagatcgtcagctctggtcacacacaccgagctgctgcccagccagttgaactca
cacgacacacaccggcacatcacacaccacggcaacgcgctgtgtcacttccacatctca
gccagcattaatcccaatacagatatcccggcggctctggccgggtccggtctcttctcc
tcaggagacagtaatggaggtttcgtggttcactggctgaataataaggatctgagcttc
acctcctccatggacgttttcatgcagcacctgaggaagttctctgagcagaacctcgaa
cacaccactgatgacatcaaacaggacggaactgcaaaatttgacttcgatctggatgag
atgtcagacaaagcatcagagcatgatgaaggagagcaggagggcagtacgaaggcgtcg
tctcccggctccagcagcagtctccctcctccgtccatcctcctggagcgcaagctggag
tccctcactctggagtggaaccggagccccgacatgctcttcaccatccacccggtcgac
ggatccttcctcgtctggcacatcaagtacctggacgagtatatccctggaatcttccgc
caggtccaggtggcgttctcctcgcggatccccgtagcgttccccaccggcgatgctaac
tctctgagtaagaacatcatgatgtacgcttgcactttccccgagcggggcggcgaggtc
tctgtggagctggacaggaagtgcgcgtctctgggcaccgtgattggcccggccgtcatg
atggtgtcgaagcacgtggacggctctctgaatcagtgggccgtgacgttcgcagagaag
tccgctttctccaacgtgctcacggtttcgcacaagttccgttactgcggccaccgtttc
catctcaacgacctcgcgtgccacactgtcctgcccctcctactgacctcatcacatcac
aatgccgttttgactccgccctctggacaggacgacccacagggcgctccatcccgcccc
ctgcgtccatccagaggcctcactccgaaggagatgggcagcaacgcggcgactcggacc
ttccatgaccccaacgccatttacagcgagctgatactgtggcgcgtcgaccacatcggg
ccgctgtcctgcacggggggcgtgtccgaaatcgcacgcatcaactccctgcacaccgcc
gccttctccaacgtcgcctggctgcccacgcttatccccagctctgtactcggaacgtac
tgtaactctgcaagtgcatgttttgtggcatcggatgggaagaacctgcgtctctatcaa
gccgtcgtggatgccaggaaactgctggacgaactgtccgaccctgagacctctaaatta
gtgggtgaggtcttcaacatcgtgagtcagcagtccactgctcggccaggctgcatcatc
gaactggacataattactaaccagtgtggctcgaacacacagctgctccacgtctttcag
gaggattttatcttaggatataaacctcacgatgacatcaccgacataaacactgctgac
ttcccttcagctgatgagtttcagccacctccattttctgagaagtttttcttggtcgtg
atcgagaaagacgagaacagaaactctgtgctgcagatgtggcatcttcatctgaaatct
gtgcacgcgtgtgtggatgacactccacgggatcagccctaccagaaccagctgacggtt
ccacacatgctcactaacgctgactcgtctcctgagtcgacaccgggtcagagccctctt
cctcgctcgtcttcctcggctaacctgcagtccgccagcaaactgatcctcagctccacc
ctcgtctacagccacagactggagctccccctgggggtggaggtgatccgcgcaacaccg
tctgcaggtcacttgagctcttcctccatttacccggtgtgtttagctccgtatctgatc
gtgacagcatgttcagatggaagggttaggttttggagatgtggcgtggattctgaagat
tctccctcataccgctgggagccgtggtgcctcctgaacgaggcggaggacaacaacagc
gccctgaccgtttcaggtcgccccgtcgccgtcagctgctcctacactggccgcctcgct
gttgcgttcaaacagttagtccctactgagcacagctcgagctctaaagacttctccatg
catgtctccatcttcgagtgtgaatccacaggtgggtccgagtgggttctggagcaaact
atccatctggatgactttgggaaacctgtcagtggtttggaccccagaatcagcgtggac
agcaacttggtggtttatagcaagtctgatctgtttgttagaaaacagaaccctaatatt
aaacacttcgttcacctggattggctctcgaaagaagacggatcacacatcctcaccgtc
ggagtgggatccagcattctgatgtacggacggatctcgggcatcgtcgccgagcaaacc
ggagggaaagatggcatggccgtcgtcactctgcctctagggggcagcgttaagcagggc
gtccgctctcgctgggttctgctgcgctccgtcgatctggtttcctccgtggacgggacg
ccgtctcttcccgtttctctttcttgggtccgagacggaatcctggtgatcgggatggac
tgcgagatgcacgtctacgctcagtggtaccaggataagaagcccagcgactctgaggac
aacgatgaagctttcatggtgaaaaaaagcgcaattgagatgacagacgacgtgatccga
gttcctgccgtaatccaagatggcggactttttgaagcggcgcattcgctgtcccccact
cttcctcagtaccaccccacccagctgttagagctgatggatttagggaaggtgagacgt
gcgaaggccatcctgtctcacctggtcaagtgtatcgctggcgaggttgctgtggttaga
gacgctgtggcaggagagggcggagccagacgacacctgtctcgcaccatcagcgtcaca
ggaagcaccggcaaggacacgatcgtcgctgggagagacggtgggcgcgattacacggaa
atcaactccatccctcctctcccgctgtacgccttgctctcggccgacctcgacacgtct
tacagaaacaaattagccgatgacgtcatatatcaggagcgggagacgcagaagtcctcg
gaggatcagtacgctgagctcttccaggaccccacggtaaacactgatgactttgcgagc
ttcgcgtgggcggacaaggcggagaagaaggagaagaagactcgtgtgattgacctgtcg
cattacggccctacctgtttcggacctgaacatgctcaggtgctctcctctcacctgatg
cactccagcctgcctggactcacccgcctcgagcagatgtttctggttgcgctcgctgat
accgtggcaaccaccagcgccgaggtgggcagagccactgataaacagtacagaggtggt
gaggctctggatgagtgcggtctcaggtacctgctggcgatgcgtttacacacctgtctg
cttacatcacttcctcctctgtaccgcatgcaactgctgcaccaaggtgtatctacgtgt
cactttgcatgggcgtttcactccgaggctgaggaggagatgttgaacatgatcccagcc
atgcagagaggagacctgcagtggtccgagcttcgcgctgtcggtgtcggctggtggatc
cgaaacatcaacacactcagacgcatggtggagaaggtggccaaagcagcgtttcagagg
aataacgaccccctcgatgctgcgctcttctacttagccatgaagaagaaagctgtgctc
tggggcctgttcaggtctcagcacgatgagaagatgacgcagtttttcagccataacttc
agtgaggatcggtggaggaaggcggcgctgaagaacgctttctctctgctggggaaacag
cggtttgagcagtcagcagccttcttcctgctcgccgggtcactcaaagacgccattgag
gtgtgtttggagaagatggaggacattcagctggccatgatcatcgctcgcctgtacgag
gccgacttcgagagctcgtccacttgtcagggaatcttatacgaaaaggttctgggctgc
aaacgggacggaaccgagttctcttgcagtaaaatgcacccggatccgttcctcaggagc
atcgctttctggatcatgaaggattacacgcgagcgctggacacactgctggagcagacg
cccaaagaggacgatgagaatccggatgtgatggtgaagtcctgcaacccgatggtgttc
agtttctacaattacttgcgcacacaccctctgatcatacgcaggcacttcgcgtctccg
gacggctctgagcgcaacagcagcgccgatcagatcaacctgatcgagcgcaaactcttc
ttcaccaccgctaacgctcacttcaaagtgggctgcccggtcctagcgctcgaggtgctg
tccaaaattcccaaagtgaccaagaagacctcctcgctcagcaagggagcttccacggct
aacgtcagcgacgtccagaatggagtccgggcctctgatctggactggagtcagccggtg
aagaagaacgatgatgatgagctgaagctggactggggagatgatgaggacgaagaggag
gaagaggaggaggaggaggaggataagaagggtctgatgatgaaggaggaaaagaaggag
gaggaagaggaggaagaagaagaggagaagaaagcgagtgattggaaggtggatgtgatc
gccgagcagctgaagttccgagcatgtctgaagatcctgatgacggagctgcgcacgctc
gccaccggatacgaggtggacggaggaaaactgcgcttccagctttacaactggctggag
aaggagatcgaggccatgcaccgcatctgcaactacaaggtggaaggccagggttcagtg
ggagagctggagaaatggagcggcagcgtgtctgctgaagcggacgagtgtgagcggagg
agtgagacggatgtgtatgagcgccatctgcaggaccggcgcagactgcaggccaaacag
ctgcacgctgagagacgtaaagcctggctgaggaagaacgaggcgctgctcagagtcttc
ctcacctactgcagcctgcacggagccaaagggggcggagtcacatccgtacgcatggag
ctgctcttcctgctgcaggagtcacagcagcactgttctgtggtcagcagtcagtcagag
gcgaaccagttcacagggatggtgtaccagggtctgctgctcagcgagaggcggagactc
aggacggagagcatagaagaacaggccacgcccacctccgcccctgcacactggccaggc
gtggcgtctctgattagcctgttagcgtgctctcagggtgaggatcagccgaggctgaac
gtgatgctgtgtgaggccgtggtggccgtgtatctgagcctgctgctgcacggcctcggc
acacactccaccaacgagctgttccgcctcgccgcccacccgctcaacgcacgcatgtgg
gctgccgtcttcgggggcggagccaagatcatcgtcaagcccaagagactagccgaggtc
acgccagtagccccgcccccgacacctccagctgaggaagtggaccgtcagcgcagacgg
tttaacatgcgtatgctggttccgggtcggcccgttaaagagacacaggccacgccccct
ccgatccccaccgaacgtcccgcctacaaggagaagttcatccccccggagctcagcatg
tgggattattttgtggcaaaacccttcctgcctctatcagacagtggagctctgtatgac
tctgatgagagtggtgatgaagatgaggaggatgatgacgatgctttcctgtctgatact
cagatgacggaacacagcgacccgaactcatacagtctctctagggcgaagcaccgcctc
tccttccccgcccgccgtctttggcacttcctggtgaaacaggaagtcctccaggagact
ctgattcggtacatcttcaccaagaagaggaagcagagtgaggtggaggcggatcttggt
tatcccggaggcaaagctaaaattatccacaaggaatccgacatcatcatggcttttgct
atcaataaggctaaatccagcgagatcgtcctggcctcaactcatgatgttcaggaattg
gacgtttccactctgctggctgcgcagtcgtacacctggatcggagaggactttgacaaa
gagtcacgcagctcggatgatgactatcgctcctcccacaccaacattgcacaggcaagc
tccgccccctttgctcctcccccaatgccagtctccgcctctatgccatggctcggcagc
ggacagactagcatgggcgctagcgtgattgtgaagaggaacttgaacaacgtgaagaga
atgacctcccatcccatttaccagtactatatgacaggagctcaggatggcagtgtgagg
atgtttgaatggaatcgcccgcagcagctcatctgcttccgacaggcaggaaacgcccga
gtcacacgactctatttcaactcacagggcaataagtgtggagtggcagatggtgagggg
tttttaagcctgtggcaagtgaatcaaacttcatcaaaccccaaaccatatttggtaagt
ggagaaatgtgtgtccctctagcgttcacctgtcatgagaacggagctacggttctgcag
tacgcccccaaacagcagctgatcatctccggagggaggaaaggcttcgtgtgtatcttc
gacatccgtcagaggcagctgttacacaccttccaggcccacgactcggccattaaagct
ttagctctggacgcgagtgaggacttcttcatcaccggctcagccgagggaaacatgaag
gtttggaagttagcgggtcacgggctcatgcactcgttcagcaccgagcacgccaagcag
tccatcttccggaacatcggcgccggcgtgatgcagatcgagacgtgtcccggtaaccgc
atcttcacctgcggcgctgacggaacgctgaagatgagggttctccccgatcgctacaac
accccgagcagcatcttcgacatcctctaa
DBGET
integrated database retrieval system
