Pangasianodon hypophthalmus (striped catfish): 113534780
Help
Entry
113534780 CDS
T05759
Symbol
shank3
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 3 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
SAM_1
Ank
Ank_4
SAM_2
SH3_2
Ank_3
Ank_5
SH3_9
PDZ_6
PDZ
SH3_1
FERM_f0
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
113534780
NCBI-ProteinID:
XP_026783530
LinkDB
All DBs
Position
Unknown
AA seq
1902 aa
AA seq
DB search
MLVSGGSGQHEPPEPRARPQHQPKPACTLLPFSLPPSLPPSLPLFVHKPQPHRLSRASQG
DSSRSSHGDGCRAPACPMEEAQGNTLVVRIGIPDLQQTKCMKFNVESPIWLSKQRILCAL
NQSLKDVLNYGLFQPAYNGKAGKFLDEQRTLKEYPLPTVTPIPYLEFRYKRRVYTQTHLD
DKQLAKLHTKANLKKFMEYVQQRNTERVSKFLEKGLDPNFHDPETGECPLTMAAQLEGCA
ELIKVLKGGGAHLDFRTRDGITALHKAVRTKNHTALITLLDLGASPDYKDSRGLTPLYHS
SMVGGDPYCCELLLHDHAQVGCVDENGWQEIHQACRHGHVQHLEHLLFYGADMSAQNASG
NTALHICALYNQDSCARVLLFRGANKEIKNYNSQTAFQVAIIAGNFDLAEIIKVHKASDV
VPFRETPSYTNRRRVTIGGGTLTSSRSLLRSASDNNLNGAETGTAHSPVPSLRSLPPLAP
PGGEAAADGSLQSTGSSRSSHSRSPSLHRVSEEPDPHVLRRHPTYTHGRGRLSPGTVQRD
VSPPPAGPSHTLAGARGPKRKLYSAVPGRTFIVVKPYTPQGEGEIQLNRGERVKVLSIGE
GGFWEGTVKGRTGWFPAECVEEVQMRQYDPRLETREDRTKRLFRHYTVGSYDNFTSYSDY
VIEEKDAMLQKKENEGFGFVLRGAKAETPIEEFTPTPAFPALQYLESVDVEGVAWRAGLR
TGDFLIEVNGVNVVKVGHKQVVSLIRQGGSNLLMKVVSVTRKPETEDVVRKKAPPPPKRA
PSTTLTPRSKSMTAELEELASARRRRGERLDEILASQESAMRPKVEADYRAATVKQRPTS
RRITPAEISVRYHTDSLFERQGLALHGPLHPALEKAHIQLPKGMSRTKSFGATEEDRLSA
LAAEHRFPRSSSMTDTLRDSHSIPPPPQTAPPPPPSLYYLDMGPPPPFCPPPPPSRVHDP
SRSSFKPGSEPRLHGLPQTMSAELYEPPRHSAHIERQKKARSMILLQDSSHHSIEPTDIP
RPGPASTPPERIKRKGRIIDNPYANVGQFSMGLYTPPPSKPQRRKSPLVKQLQVEDAQER
ASLALASVHSREHSPTGRLPAHHTSRAEYYQQQLLQERSRAQAEGVLQGKGHFAAAIAGA
VKDREQRLEERRKSTVFLSVGTMEGSSAPPLESPLLTQSHSVDERLLTSELGQLPPPALA
LRPSSSGTTFIHPLTGKPLDPNSPLALALAARERALTSQSQSPASSPEPRTKHEAAGGVL
FMDTQTKEAEGERDLASLSFSPGEKRSYTSTPTSKISWGTPTTTRKETEMGTEKKEEKKV
EDKKSMIISIMDTLQHKTAGLIMVHATSNGQAVGLGPEHVSPPPKGIISESPKPTLAEIK
RTKSPSPEAPSTPTPTPATPSTPKAPTSPSSDKTPQASSSPSSDKTLAQGSSEEDVEPYS
VTLPPAMLSSSDEETREELRKIGVVPPPDEFANGLLVKAPGTAATPSAAKLVTPSEPSPV
PGPTPPTAAATAAQAPATSGQPAASGKPSEPHLGPESAADSGVEEVDTRSSSDHHLETTS
TISTVSSMSTLSSESGEPTDTYTSHADGQTFILDKPPVPPKPKLKSQLSKGPVTFRDPLL
KQSSDSELLSQQHAAALAAATGTSGPTRPRYLFHRRSKLWGDPIEPRPLAGAEEGKPTVI
SELSSRLQQLNKDTCSLGEEPLIGSLDPGRKSPVAGARLFSSLGELHTISQRSYGTTYTI
RPGSRYPMTRRTPSPGSASPDRSDPLGPIRGFGLATSPTAAPTILKSSSLSLPHEPKEVR
FVMRSSSARSRSPSPGHSPSVPSPLLTLRPFHQKPLHLWNKYDVGDWLASINLAEHRERF
QEHEIEGSHLPALTKEDFAELGVTRVGHRMNIERALKQLLER
NT seq
5709 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtgagtggaggctccggccaacatgagcctcccgagcccagagcgcgtccacag
catcagcccaaacccgcgtgcaccctcctccctttctcgctccctccctcactccctccc
tcgctccctctcttcgtccacaagcctcagccgcaccgcctctcccgcgccagccagggg
gacagctcccgcagttcccacggtgacggttgccgagcgccggcctgccccatggaggaa
gcccaaggcaacacgctggtcgtccgcatcggcatccccgacctgcagcagacgaaatgc
atgaagtttaatgtggagtctcctatctggctgtctaaacagcgcatcctttgcgcgttg
aaccagagcctgaaagacgtcctgaactacggccttttccagcctgcatacaacggcaaa
gcgggcaagttcctggatgaacagcgcactctgaaggagtacccacttcccactgtcact
cccataccatacctagagtttcgctataagaggcgtgtatacacacagacccacctggat
gacaagcagctagccaaactacatactaaggctaacttgaagaagttcatggagtatgtt
cagcagaggaatacggagagggtttcaaagtttttggagaaaggcctggacccaaatttc
catgacccagagactggggagtgtccattaacgatggcggctcagttagaaggctgtgca
gagctcattaaggtgttgaaaggtggaggagctcatctggacttcagaaccagagatggc
atcactgctctccacaaagctgtgcgcacaaaaaaccatacagctctgataacactgctg
gacctgggtgcgagtccggactataaagacagtcggggtttgactccattgtaccacagc
tccatggtgggaggcgacccctactgttgcgagctgctcctgcatgaccacgctcaggtg
ggctgtgtggatgaaaacggctggcaggagatccaccaggcctgtcgtcatggacacgtg
caacatctggagcatcttctcttctacggagctgacatgagtgcgcagaatgcttctgga
aacactgccctacacatctgtgccctctacaaccaggatagctgtgcacgtgttttgctg
ttcagaggagcgaataaagagataaagaactacaacagccaaactgccttccaggtggct
attatagctggaaattttgacctggccgaaataataaaagttcacaaagcatcagatgtt
gtgcctttcagggaaacgccttcctacacaaaccgccgacgcgtgacaataggaggtggc
actctgacctcatcacgctccctgcttcgttccgcctccgacaataacctgaacggggcc
gagacgggtactgcccactctcccgtgccctctctgcgcagtctgccccctctggcaccc
cctggaggtgaggcagcagccgacggtagcctccagagcaccggcagctcccgctcctcc
cactcacgctcaccttctctgcaccgcgtcagcgaggaacccgacccacacgtcctgcgc
agacaccccacatacacacacgggcgcggccgcctcagccctgggacagtgcagcgggat
gtcagccctccacccgccgggccttcgcacacactcgccggcgcccgcgggcccaaaagg
aaactctacagtgccgtgcccgggcgtaccttcattgtggtgaagccctacacaccccag
ggagagggagagatccagctgaaccgtggagaaagggtcaaagtgctcagtataggagaa
gggggcttctgggagggcacggttaaagggaggactggctggtttcctgcagagtgtgtg
gaggaagtgcagatgagacagtatgaccctcgactagaaacaagagaggatcgtacgaag
aggctgttcagacactacactgtgggctcctatgacaactttacctcctacagtgattac
gtcattgaggagaaagatgccatgctgcagaagaaagagaacgaaggttttggttttgtc
ctgcggggagcaaaagcggaaacacccattgaagagtttacccccacgcctgccttccct
gcattacaatacctggagtctgttgatgtggagggcgtggcctggagggcagggctaagg
acaggtgacttcctcattgaggtgaacggagtgaacgtagtgaaggtgggccataagcaa
gtggtgtccctaatccggcaaggcgggagcaatctgctgatgaaagtggtgtcagtgaca
cgcaaaccagaaactgaggacgtggtcaggaaaaaggcaccaccgccacccaagagagcg
cccagcaccacgctcacgccaaggtccaagagcatgactgctgagcttgaggagctggca
tctgcaaggaggaggcgaggagaaaggctagatgaaatcttggcctctcaggagtcagca
atgaggccgaaagtggaggcagactacagagcagccacggtgaagcaacgaccaaccagc
cgtcgaattacaccagcagaaatcagtgtgagataccatacagattctctttttgagcgg
caaggtcttgctctccatggtcctcttcacccagcactggaaaaagctcacattcagctg
cccaaaggcatgtccagaacaaagtccttcggagctactgaggaggaccggctgtctgcc
ctggcggcagagcacaggtttccacggagctcctcgatgacagacaccctgagagacagt
cacagcatccctcctccacctcagacagcaccacctccaccaccctcactctactacctg
gacatgggtccacctccccctttctgcccaccccctcctccgagccgtgttcatgatccc
agccgctccagctttaagccaggctcagagccccgactccatggcctaccacagaccatg
tccgctgagctgtatgaacccccacgccacagtgcccacatagagcgacagaagaaggcc
cgttccatgattctcctgcaagactcgtcccaccattctatagagcccacagacatccca
cggcccggccctgcctccaccccaccagagagaatcaagcgcaaaggacgcattatcgac
aacccttacgctaatgtaggccagttcagcatgggcctgtacaccccaccacccagcaag
ccccagcgcaggaagagcccactagtaaagcaactgcaggtggaggatgcccaagagcga
gcctcgctggcactggcttcagtccactccagggagcattcacccacaggccgactgcca
gctcaccatactagcagggcagagtactaccagcagcagctgctacaggagcgcagtcgt
gctcaagctgagggtgtactgcagggcaaagggcattttgctgccgcaattgctggggct
gtcaaggacagggagcagcgtcttgaggagcggcgaaaatccacagtcttcctgtctgtg
ggcaccatggaaggcagctcagccccaccgctggaatcccccttactcacacagtctcat
tctgttgatgaacgcctgctcaccagtgaacttggtcagctgcctccacccgccctggca
ctgcgaccctcttcaagtggcacaactttcatccacccactgacagggaagccccttgac
ccaaactcccctttggcacttgcgctggccgcaagggaacgggctttaacttcccagagc
caatcccctgctagcagccctgagcctaggactaagcatgaggctgctggtggtgtgctg
ttcatggacacccagaccaaagaggctgagggcgagagggatcttgcatcactctccttt
tcccctggagaaaaaaggagctacacatccacccccactagcaagatctcatgggggaca
ccaacaaccacaagaaaagaaacagagatgggaacagagaagaaagaggagaagaaggta
gaagacaagaagagcatgatcatcagtatcatggacacattgcagcataagactgctggg
cttattatggttcatgcaaccagtaatggacaggcagtaggtctgggcccagaacatgtc
tcccctcctcccaaaggcataatttcagagagcccaaagcccacattagctgaaatcaag
cggaccaagtctcccagtccagaagcaccctccacaccaactccaacccctgccacacct
tcaacccccaaagcacctactagtccttcctcagataaaacaccccaggcatcctctagc
ccatcctcagataaaaccctggcccagggaagctcagaggaagatgtggagccctattct
gttaccttaccacctgccatgctgtcctctagtgatgaggagacacgggaggaactgcgc
aaaattggtgtggttcctccaccagatgaatttgcaaatggtctcctagtgaaggcacct
ggaactgctgctacaccttcagcagccaagctagtgaccccctcagaaccatccccagtc
ccaggtcccacacctccaaccgcagccgctacagcagcacaggctcctgccaccagcggc
caaccagcagcctcagggaagccatctgagccccacctgggcccagagtctgctgctgac
tctggagtagaggaggtggacactcgcagctccagtgatcaccatctggagaccacgagt
accatctccactgtctccagcatgtccaccctatcctcagagagtggcgagcccactgac
acctacacgtcccatgccgacggccagaccttcatccttgataagccgccagtgcctcca
aagccaaagctcaagtctcagctcagcaagggcccagtaactttcagggaccccctgctc
aaacagtcctcggatagtgagttgctctcacagcagcatgcagcagcgctggctgctgcc
acggggacctcgggcccaacaagaccccgctacctcttccacagacgctccaagctatgg
ggggaccccatagaaccccgtccgcttgcaggcgcagaggaaggcaaacccactgtgata
agtgagctaagctccagactgcagcagctcaacaaggatacatgctcactaggtgaagag
ccactcataggctcactcgaccctggacgcaagtcacctgtggccggtgccagactcttc
agcagtctaggggagcttcataccatctctcagcgaagttatggcaccacatacaccatc
cgaccaggcagccgttacccaatgacccgtcggacacccagccctggctctgcttcccca
gatcgttcagatccactcggacccatccgaggcttcggcctggctacctcgcccaccgcg
gcccccaccatcctaaaatcctccagcctcagcctgccccatgagccaaaggaggtgcgc
ttcgtcatgaggagctccagcgccaggagccgctctccctcacctggacactcccccagt
gtgccctcaccactccttacactgcgccccttccaccagaaacccctgcacctgtggaac
aagtatgatgtgggtgactggcttgccagcattaatctggctgagcaccgtgagcgcttc
caggagcacgaaattgagggctcccatctcccagccctcactaaagaagactttgccgag
ctgggtgtgacacgcgtaggccatcgtatgaacattgagcgtgccctaaagcagctgctg
gaaaggtga
DBGET
integrated database retrieval system
