Pangasianodon hypophthalmus (striped catfish): 113534797
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Entry
113534797 CDS
T05759
Symbol
pcdh17
Name
(RefSeq) protocadherin-17
KO
K16499
protocadherin delta 2
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
phyp04515
]
113534797 (pcdh17)
Cell adhesion molecules [BR:
phyp04515
]
Cadherins
Protocadherins
113534797 (pcdh17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
PepSY
Cadherin_C_2
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
113534797
NCBI-ProteinID:
XP_026783566
LinkDB
All DBs
Position
Unknown
AA seq
1131 aa
AA seq
DB search
MALVSRRMHLSVLSFLLLWAQALTLKNLNFTISEEKNQGVIGNIAKDAGLELREQGKKSN
FRVLENSAPHLIDVDPESGLLFIKQRIDRETLCKRNPKCQLSMEVFANDKEIYMIKVDIQ
DINDNAPSFPSDQIDIDISENAAPGTRFPLAAAYDPDTRENGLKTYQITRDDYSIFSLDV
KSRGDGTKFPELVVQRSLDREERSHHTLIITATDGGEYPKSGTMQINVKVIDSNDNSPVF
EQSSYVVEIPENSPPGTVLIDLNATDPDEGSNGQVTYSLSFYGSDRIKELFSIDPKTGVI
KIQGKIDYEENPIIEIDVQAKDQGPNPVPGHCKVTVKVLDRNDNWPSIGFVAVRQGAVSE
AAPPGTVIALVRVTDKDSGRNGQLQCRILGNVPFRLEENSDNFYTVVTDRPLDREVKDEY
NITIMAKDNGNPPLNATKSFTVKILDENDNAPRFTKMVYLLQVPENNIPGEYLGSVLAHD
PDLGQNGTVSYSLLPSNVSEESITTYVNIKPTDGAIYALRSFNYEQTKYFDFKVQAKDSG
NPHLESNTTVRVSVLDVNDNIPVIVLPLLQNDTAEIHVPRNVGVGHVITTVRAVDNDFGE
SGRLTYEISDGNEEHLFEIDSVTGEVRTAQPLWEEVSSVVELIIKVTDHGKPTLSAMAKL
VVKAYSGPLPEGEPRINAEQHGWDVSLPLIVTLSVISVMLLAAMIAVAVKCKRENKEIRT
YNCRIAEYSHPQLGKGKKKKINKNDIMLVQSEVEERDTMNVMNVVSSPSLATSPMYFDYQ
TRLPLSSPRSEVMYLKPTANNLSVPQGHVGCHTSFTGPVTSTTETPVNRMSIIQTDNFPT
EPNYMGSRQQFVQSSSTFKDPERVSLRDSGHGDSDQADSDQDTNKGSCCDMSAKEALKMK
ATGLKPQPLEQEEDCVNCTDECRVLGHSDRCWMPQFPAPGMAQAEGLDYRTNLFVPAGME
AVATEPESYEATGNTSGKKTFCTFGKERREHAVLVANVKPYLKGKRALSPLLQEVPSASC
SPTKGTKGVADGAEVNPSTSHYEGPNGLYTSPGKQSRDQGYCALTGSDPVAKVLLEARSR
ISQETANEPDGALEHGGGEASRGGMDAEQVVRDIDKLLQDCRGNEAAVVRK
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcgtgtcgagacgaatgcacctctctgttttgtctttcttactcttgtgggcg
caagccctgacgttgaaaaacttgaactttacgatctccgaggaaaagaaccagggtgtg
attggaaacattgccaaagacgcagggctcgagctgagagagcagggcaaaaaatccaac
ttcagggtgctggagaattcagctccacacctcatagatgtggaccctgagagtgggctg
ctctttatcaagcagaggattgatagagaaacactgtgcaaacgaaaccctaagtgccag
ctctctatggaagtgtttgccaatgacaaagagatctacatgattaaggtagacatacag
gacataaacgacaatgcgcccagctttccttccgatcagatcgacatcgatatttcagag
aacgccgcccctggcacccgctttcccctagctgctgcctacgaccccgacacccgggaa
aacggccttaaaacatatcaaatcacacgagatgattacagcatattttctctggatgtg
aagtccaggggagatggaactaaatttcctgagctggtcgtccagaggtctttagataga
gaagagcgcagccatcatactctaattataactgccacagatggaggggagtatccgaag
tcaggcacaatgcaaatcaatgtgaaagtaattgattcaaatgacaatagccccgttttt
gagcagtcctcttatgttgtggaaattcctgagaattctccaccgggcacagtattgata
gatttaaatgccactgaccctgatgaaggaagtaatgggcaggttacctattctttgagt
ttttatggctcggatagaatcaaagaattgttctcaatagaccccaaaacgggtgtcata
aagattcaggggaaaatcgactatgaggaaaacccaattatagaaattgatgtgcaggca
aaggatcaaggtccgaatcctgttcctggccattgtaaagtcactgttaaagtgcttgac
aggaatgacaactggccatcaataggctttgtagcggttcggcagggggcagttagtgaa
gcagcacccccagggactgtcattgctctggtgagagtgactgacaaggactctggccgc
aatgggcagctccagtgtaggattttaggcaacgtcccattcagacttgaggagaactct
gacaatttctacacagtggtcacagatagaccgctggatcgagaagtgaaggacgaatac
aacattacgatcatggccaaagacaacggtaaccctccactgaatgccaccaaatctttt
acagtcaaaattctggatgagaatgataacgcaccaaggttcactaagatggtctacctc
cttcaggtgcccgaaaacaacatcccaggagaatatcttggttcagttctggcccatgac
ccagacttgggccaaaatggcactgtttcctattccctccttccatctaatgtgagtgag
gaatccatcaccacatacgtgaacatcaaaccaaccgatggagccatttatgccctaagg
agtttcaattatgagcagaccaaatattttgatttcaaggtccaggctaaggactcaggt
aatccccatctggagagtaacactacagtacgtgtgagtgtgcttgatgtcaacgacaac
atcccagtcattgtgctgccactgttgcaaaatgatacggcagagatacacgtcccacgc
aatgttggcgtaggccatgttattacgacggtgagagcagtggacaatgactttggcgag
agcggccgcctaacctacgagatctcggatggcaacgaggagcacctgtttgagattgat
tctgtgacgggagaggtgcggacagctcagccactgtgggaggaggtgtcttctgtggtg
gagctcatcatcaaagtgacagaccatggaaagcccacgctctccgccatggccaagctc
gtggtcaaggcatattcgggacccctgccagagggcgagccgcggatcaacgctgagcag
catgggtgggacgtgtcgctccctttgattgtcacgctcagcgtcatttccgtcatgctg
ctggcagccatgattgcagtcgccgtcaagtgcaagcgggagaacaaggagatccgcacc
tacaactgccgcatcgcagagtactcacacccacagctgggcaagggcaaaaagaagaag
ataaacaagaatgacatcatgctggtgcagagcgaagtggaggaacgtgacaccatgaac
gtgatgaatgtagtgagcagcccctcgctggccacatcaccgatgtacttcgattaccag
acccgccttcccctcagctcgcccaggtctgaggtcatgtacctcaaaccgacagccaac
aacctcagcgttccccaaggacacgtgggttgccatacgagtttcacggggcctgtgact
agcaccacagagacaccggttaacagaatgtcgataattcagaccgacaacttccccacc
gagcccaattacatggggagcaggcagcagtttgttcaaagcagttccacgtttaaggac
ccggagcgagtgagtctgagggacagtggacatggggacagtgaccaggccgacagcgat
caggacaccaataagggctcgtgctgcgacatgtccgccaaagaagcactgaagatgaag
gcaactggactcaagcctcaacctcttgagcaggaagaggactgcgtgaactgtactgat
gagtgccgggtcctgggccactcggaccgctgctggatgccccagttcccggcaccaggc
atggcgcaggctgagggtctcgactaccgcacaaacctgttcgtacctgcaggaatggag
gccgtggcgaccgagccagagagctatgaggcaacaggcaacaccagtggcaagaagacc
ttctgcacttttggcaaggagcggcgtgagcatgccgtcctggtggccaacgtcaagcct
tacctcaagggcaagcgtgctctcagcccactgctccaggaagtgccctcagcctcgtgc
agccctaccaagggaaccaaaggcgttgcagacggagccgaggtcaatcccagcaccagc
cactatgaagggcccaatggactttacacttctcctggaaagcagagtagagatcaaggg
tactgtgcactaaccggctcagatcctgtagccaaagtgctgttggaggcacgttcacgc
atcagccaggaaacggctaacgagccggacggagcacttgagcatggaggaggagaggca
agccgaggaggcatggacgccgagcaggtggtcagagacatcgataaacttctccaggac
tgccgaggcaacgaggctgcagtggtcaggaagtga
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integrated database retrieval system
