Pangasianodon hypophthalmus (striped catfish): 113534890
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Entry
113534890 CDS
T05759
Symbol
mindy4
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase MINDY-4
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113534890 (mindy4)
Enzymes [BR:
phyp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
113534890 (mindy4)
Ubiquitin system [BR:
phyp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
113534890 (mindy4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MINDY-3_4_CD
Motif
Other DBs
NCBI-GeneID:
113534890
NCBI-ProteinID:
XP_026783668
LinkDB
All DBs
Position
Unknown
AA seq
668 aa
AA seq
DB search
MGRDVEEVAAAVVREYLSRKGLKKTIACMDEELPRTNSSINNRSELCRVLRLESLYKKNK
CEEQPLKTMLEIMTKERMKKGGDVKRRPVEGDQCAEQNSSKPGPDSAADDDARRGKDLAQ
LHTDEMRLSETSTVSQLGSSSPPQLEGNLNTTSPTAGLGSEKKSGGADIQASRSSRMRRG
IMAGPIAASSQENTRRRPARKTAASPSLLPKNEEEDSSGLNWRSRSSSTDASHARSDEVN
ALERESTPSIRQSDGTDRSSKLRAHKNESAPSPRLDALHMAGLVLDDVDDQEVSAGLSAV
LNNNVSRHRDWNKLPMDQKTATALKEIIFGSPVACFSEEWRCQSFTFSSRPALRYGIVQK
KGGPCGVLAAVQATVLQKLLFEGTSSDALSERLSDAVRTKCLTDAVAGILWRAADRKNVT
VAVNSGRSHFTPVGHYRSDGILETITCVNVQSFDDLKLLIEQHIHQFESGPFGCVLLIVS
AVLSRTIPMVRGDMDVPTSTLIGAHGYCTQELVNLLLCGRAVSNVFDNEMKLDSGNGNFT
LLKGIRERCDIGLLSLYEHYNICNVGSYLKNPRFPIWVVCSESHFSVLFSLCEDLTSSRR
SPREFDLHYYDGLANQQEPIRLTVYPDSAVKTPDAEDVDSDLTPPLELCIRTRWTDAAVS
WNDSEPIL
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggggagagatgtggaggaggtcgcggctgctgtggtgcgggaatatctcagcagaaag
ggtctgaagaaaaccatcgcctgcatggacgaagagcttccacggacaaactcgagcata
aacaaccgctcagagctgtgccgagtgctccgcctagagagtctgtataagaagaataag
tgtgaagaacagccgctgaaaacgatgctggagatcatgacgaaggagcggatgaagaag
ggcggagacgtcaaaagacgccccgtcgaaggggatcaatgcgcggagcagaactcgtca
aaacccggtcctgactccgccgctgatgacgatgcgaggaggggaaaagatctcgcacag
ctgcacacggacgagatgaggttatctgagacgagcaccgtgtcgcagctcggctcttca
tctccaccacagctggaaggaaacctcaacaccacgtcccctacagcaggcctgggctcg
gagaagaagagcggaggagcggacattcaggcgagcaggagcagcagaatgaggagaggc
atcatggcaggtcctattgctgcctcctctcaggaaaacaccaggagacgtcctgccaga
aagaccgccgcgtctccgtctcttttacccaagaacgaagaagaggattcatccggactg
aactggaggagccggagcagcagcacggacgcttcacacgccagatcggacgaagtcaac
gccctcgagcgagaaagcacgccgtctatcagacagagcgacggaacggacagatcgtct
aaactcagagctcacaaaaatgaatcagcgccgagtcccagactggacgctcttcacatg
gcgggattggttctggatgacgtagatgatcaggaagtctcggccggactctctgctgtt
ctgaataataacgtctcacgtcatcgtgattggaataaactccccatggaccagaaaaca
gctactgcgctgaaggagatcatcttcggctcccccgtggcctgcttcagcgaggagtgg
aggtgtcagagcttcaccttttccagcagacccgctctgagatacggcattgtgcagaag
aagggcgggccgtgtggagtgctcgctgccgttcaggccaccgttctccagaaacttctg
tttgaaggaaccagcagtgacgcactttctgagagactgtctgacgctgtgaggacgaag
tgcctgacggacgccgtggctggaatcctgtggagagccgcagacaggaagaacgtcacc
gttgccgtaaactcagggaggagtcacttcacccccgtgggccactacagatctgatggc
attctggagacgatcacctgcgtgaatgttcagagctttgacgacttaaagctgctgatc
gaacagcacattcatcagtttgagtcgggtccgttcggctgcgtcttgctcatcgtctct
gccgtcttgtccagaacgattccgatggtgagaggggacatggacgttcctacttccact
ctgattggcgcacacggctactgcacgcaggagctggtaaacctgctgctctgcggacgc
gcagtttctaacgtctttgataacgagatgaagctcgactccggaaacggaaatttcacg
ctgctgaaggggatcagagagcgctgcgacatcggactgctgtctttatatgagcattac
aacatatgtaatgtcggctcttacctgaagaacccgaggtttccgatctgggttgtgtgc
agcgagagtcacttcagcgtcctcttctcgctgtgtgaagatctgacgtccagccgccgg
agcccgcgagagtttgacctgcattactacgacggcttggccaaccagcaggaaccaatc
agattaacagtgtatccagactcggctgtaaagacgccggatgctgaggacgtggattcg
gacctcacacctccgctggagctctgcatcaggaccagatggacagacgcagccgtgagc
tggaacgacagcgagcccatcctctga
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