Pangasianodon hypophthalmus (striped catfish): 113534907
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Entry
113534907 CDS
T05759
Symbol
trim33
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM33 isoform X1
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
phyp01001
]
113534907 (trim33)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113534907 (trim33)
Enzymes [BR:
phyp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113534907 (trim33)
Protein kinases [BR:
phyp01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
113534907 (trim33)
Ubiquitin system [BR:
phyp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
113534907 (trim33)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-B_box_Trim66
zf-RING_UBOX
PHD-1st_NSD
Motif
Other DBs
NCBI-GeneID:
113534907
NCBI-ProteinID:
XP_026783698
LinkDB
All DBs
Position
Unknown
AA seq
1194 aa
AA seq
DB search
MADNKGQGDTESPASMEVEPPTTLNGDAVAEHSDKANGTDAVLKDGDDGQSRETAPETPT
PSAESSESAAAAAADGGGGGGGGGEAEGGGEASSSRSSVNVSPDGNSNTESTEPSLPAVD
ATATATPAAAVAGTSSPAPGTETAPGAAAAPSAVPLNLLDTCAVCKQSLQSRDCEPKLLP
CLHSFCLKCIPQPERQISVGVAGPHGQDTHIVNVMRCTVCYQDYKQIDMVENYFVKDTTE
ASSTSTEKSTQVCTSCEDNASAIGFCVECGEWLCKTCIEAHQRVKFTKDHTIRKKEEVSQ
ESVGTSGQRTVFCPIHKQEALKLFCETCDKLTCRDCQLLEHKEHRYQFLEEAFENQKGII
ETFMAKLHEKRNFVQFSAAQVQNRLKEAAETHKKVEHEIKIAVFTLINEINKKGKSLLQQ
LESVTKERTVKLLNQQRDISSLAQQILHVLRFTHWAISNGSSTALLYSKRLITYQLRFML
KARVDPVPHANGAVRFFCDPTFWAKNVVNLGNLVIEKVPPPAPHPPNMMVGQQISPGHNT
AGKHPGQINLAQLRLQHMQQAAFAQKQQQQQQQHQQQMQQQMRIASQMSQHPRQGGPPQM
IQQQPPRLISMQSLQREGVNGGPHMYPPPPHLRMANSQNRMPVAQPRLNGQPYPMMQPQL
QRQHSNPGHAGPFPVTSLHNVSAANPTSPTSASMASAHGHRGPTSPVVGPIELIPSVTNP
ENLPCLPDIPPTQLEDAGSTMLDNLLSRYISASTQPPALASNNNLNSSPGPSTHSPGSSG
LSSSLTPARPSSSSSTGSRGSRGSAGSSGPVNAAPEQVKVKQEPGAEEECGFSGANVKSE
RGKDGRRSACMMSSPEASLTPPLPVLGSVSTGSVQDILRTLGENIKMEPQSENQPPSCSS
TQKPSSQSSAHFTNGTQTTLLSHRSQRSSISGSQTNANSQSNTEGKEDDPNEDWCAVCQN
GGELLCCDRCPKVFHITCHIPTLRSSPSGDWMCTFCRSLTNPEIQYNCDDDPPNKKDKNE
QGLSPEDQRRCERLLLYLFCHELSVEFQEPVPSSVPNYYKIIKHPMDLNLVKRKLQLKHP
QHYQSPKEFVYDVRLVFSNCAKYNEMSRIIQVYDEEKQSNVQADSEVAEAGRAVSLYFEE
KLALIFPDQSFPVEPEKRSRDEDTAEEAAADSDDEFVHPKRKRLKPEEKPVHIK
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaacaaaggccaaggggatacagagagcccagctagcatggaggtagaacct
ccgacgacgcttaacggagacgctgtcgctgaacattccgataaggctaacggcacagac
gctgtcttgaaggacggagacgatggacagtcccgggaaaccgctccggagacgccgaca
cccagcgccgagagcagcgagtccgccgccgccgccgccgctgatggaggaggaggagga
ggaggtggaggagaggcagaaggaggaggggaagcgagctccagccgcagtagtgttaac
gttagcccggacgggaactcgaatacggaaagcacggagccctcgctgcccgcggtagac
gccacggccaccgccactcccgctgccgcagtggcgggcacttcttcccccgctcccggt
acagaaacggcgcctggcgctgctgcggctccgtccgcggtgccactaaacctcctggat
acgtgcgccgtgtgtaaacagagcctccagagccgcgactgcgaacccaaactcctgcca
tgtctgcactctttctgcttaaagtgtatccctcagccggagaggcagatcagcgtggga
gtcgccggtccccacgggcaggacacgcatatcgtgaatgtcatgcggtgtacggtgtgc
taccaggactacaaacagatcgacatggtggaaaattacttcgtgaaggacacgacagag
gcctctagcacttcgacagaaaaatcgacgcaggtatgcaccagctgtgaagacaacgcc
agcgccattggtttctgcgtggagtgcggtgaatggctatgcaagacatgcattgaagca
caccagagagtgaaattcaccaaggatcatacaatacgtaaaaaagaggaggtctctcaa
gagtcagtaggtacatcgggacagaggacggtcttctgtccgatccacaaacaggaggcg
ctcaagctcttctgtgagacctgcgacaagctgacctgcagagactgccagctgctggag
cacaaagagcacaggtaccagttcctggaggaggcctttgagaatcagaaaggaattatt
gagacgttcatggccaaactgcatgagaagaggaattttgtacagttttctgcagctcag
gtgcaaaatagattaaaagaggcggctgagacgcacaagaaggttgagcatgagattaag
attgccgtcttcacgcttatcaatgaaatcaacaagaaaggcaaatctctacttcagcag
ctggagagcgtgacgaaggagcgcaccgtgaagttgctaaaccagcagcgggacatcagc
tcactggcacagcagatcctgcacgttctgcgcttcactcactgggccatcagcaacggc
agcagcaccgcgttgctgtacagcaagagattgatcacgtaccagctgcgcttcatgctt
aaagctcgtgttgacccggtgcctcatgccaatggagcggtccgcttcttctgtgacccc
accttctgggccaagaacgtcgtaaaccttggaaacctggtgattgagaaggtgccccct
ccagccccccaccctcccaacatgatggtggggcagcagatttcaccgggccacaacaca
gcaggaaaacaccctgggcagatcaacctggcacagctgcgactgcagcacatgcagcag
gctgcttttgcacagaaacaacagcagcagcaacagcagcatcagcagcagatgcagcag
caaatgcgcattgcctcgcaaatgtcccagcatccacggcagggaggaccacctcagatg
atacagcagcagcctccaagactcatcagtatgcagtcgctgcagcgggagggagttaac
ggcgggccccacatgtaccccccaccccctcacctgcgcatggcgaactcgcagaaccgc
atgcctgtggcccagccccgcctcaatggccagccgtatcccatgatgcaaccacagctc
cagagacagcattccaaccccggccacgccggccccttccctgtgacatccctgcacaac
gtcagtgctgctaaccccaccagtcccaccagcgccagtatggccagtgcccatgggcac
cgggggcccaccagccctgtggtgggccccattgaactcattccttcagtgaccaaccct
gagaacctgccctgcctccccgacatcccccccactcagttggaagatgcaggttccacc
atgttggacaatctcttaagtcgctacatttctgctagcacacaacccccagctctggca
tccaacaacaacctcaactcctcaccgggcccctccacacactctccagggtcatcagga
ttatcaagctcactcactcctgcacggccgtccagctcttccagcacaggaagtcgcggc
agccgagggtcagcgggcagttcagggcctgtgaacgcagctccagaacaggtgaaggtc
aaacaggagcctggagcggaggaagagtgtggattctccggggccaacgtcaagtccgaa
cggggcaaagatggccgacggagcgcttgcatgatgagcagtccggaggccagcttgact
cctcctctccccgtgctgggttccgtgtccaccggttctgtgcaggacattttaaggaca
ttgggagagaacattaaaatggagccacagagcgagaaccagccgccgtcctgcagcagc
acacaaaagccgagctcccaaagcagtgctcatttcaccaacgggacccagaccactctg
ctttcccatcgctctcagaggagcagcatcagcggctctcagacgaacgctaacagccag
tcgaacacagagggaaaagaggacgacccgaacgaagactggtgcgcagtgtgtcagaac
gggggagaactcctgtgctgcgaccgctgccctaaagtcttccacatcacctgtcatatt
cctacactccgctcctcacccagtggagactggatgtgcacattttgtagaagtctgacc
aaccctgagatacagtataattgcgatgatgatcctcctaataagaaagacaagaatgag
cagggtctgagtcctgaggaccagaggagatgtgagcgtctgctgctttatttattctgc
catgaattgagtgtagagtttcaggaacctgttccttcttcggtgcccaactactataag
atcataaagcaccccatggacctgaatctggtgaagaggaaactgcagctgaagcacccg
cagcactaccagagccccaaagagtttgtgtacgacgtccgtctcgtattcagcaactgt
gccaagtacaacgagatgtctcgaataatccaggtatatgatgaggagaaacagagtaat
gtgcaggctgactcggaggtcgccgaggcagggagggccgtgagtctgtactttgaggaa
aagctggctttgatctttcctgaccagagtttcccagtggaaccggagaagagatcccgg
gacgaggacaccgccgaggaagcagcagcggactcggatgacgagtttgtgcatccgaag
cggaagcgattaaaacccgaagaaaagcctgtgcacataaagtga
DBGET
integrated database retrieval system
