Pangasianodon hypophthalmus (striped catfish): 113534916
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Entry
113534916 CDS
T05759
Name
(RefSeq) sorting nexin-27-like
KO
K17936
sorting nexin-27
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113534916
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
113534916
Membrane trafficking [BR:
phyp04131
]
Protein recycling
Others
Others
113534916
Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
113534916
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
SNX17-27-31_F1_FERM
RA_2
VirE3
SNX17_FERM_C
PDZ_2
USP7_C2
SNX17-31_F2_FERM
RBD
DarA_N
Motif
Other DBs
NCBI-GeneID:
113534916
NCBI-ProteinID:
XP_026783712
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
MADVEGDEIRGAPDSCPVTLPAASRNGSGGQTVTAGPRIVRIIKSESGYGFNVRGQVSEG
GQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVSVEGATHKQVVDLIRTG
EKELVLAVLSVPPQEVDGLDSGEDGSASPNYDYSDKQAVPISIPTYKHVEQHGERFVVYN
VYISGRQLCSKRYREFSILHQNLKREFASYSFPKLPGKWPFSLSDQQLDARRRGLEEYLE
KVCSVRVIGESDIMQEFLSESDENYNGVTDVELRIALPDKTTVSVRVRKNSTTDQVYQAL
VMKVGMDSIMASYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLALRKWLFSI
EEQELLQENPLALHYCFHQAQDDVKKGFIKAEDKSYQLQKLAEQRKMATYLNLLRTCEGY
NEVAFPHCSCDSRRRGHVIAAVSIHHFKLHACTEDGTLENQVIAFEWSEMQRWDTDEEGM
AFCFEYVRGEKKPRWVKIFTPYFNYMHECFERIFYELNWRKEVEEEASDKDNKSCNEYLP
PLEQQKGWHHLGKEIATS
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtcgagggagacgagattcgtggcgctcctgattcgtgtccggtaacgctg
cccgcggcgtctcgaaacggctccgggggtcagacggtaacggcgggaccacgcatcgtt
cggattattaagtcggagtcgggctacgggtttaacgtccgcggtcaggtgagcgaaggc
ggccagctgcgcagcattaacggagagctgtacgcgcctctgcagcacgtcagcgccgtg
ttacccggcggagcggcggaccgagccgggatatcgaaaggagacagaatcctcgaggtg
aatggcgtgagtgtggagggcgctacacataagcaagtggtggatctgattcgaacagga
gagaaggagctggtgctcgctgttctgtctgtgccaccgcaggaagtagatggtctggac
tctggagaggacggctcagcttcacctaattatgactacagtgacaagcaggctgtgccc
atctccatccccacgtacaagcatgtggagcagcatggagaaagatttgttgtatataat
gtctatatatctggcagacagttgtgctcaaagcgctaccgggaattttccattctgcac
cagaacctaaagagagagtttgcatcctactcgtttcccaaacttccagggaaatggcct
ttctctctctctgaccaacagttggacgcccgtaggagaggcctggaggaatacttggag
aaagtgtgttcagtaagggtcattggagagagtgacatcatgcaagagttcctctctgag
tcagatgagaactataatggtgtaaccgatgtggagttgcgaatagccctgccagataag
accactgtttcagttcgagtgcgcaaaaacagcaccactgaccaagtctaccaggcccta
gtgatgaaggttggcatggacagcatcatggccagttattttgccctttttgaagtgata
aaccactcctttgtccgtaagttggcccctaatgagttccctcacaagctgtatgtgcag
aactacacgtcggcagtgccagggacctgtctggccctgcgcaagtggctcttcagcata
gaggagcaagagcttctacaggaaaatcctctagctctgcattactgcttccaccaggct
caggatgatgtgaagaagggattcatcaaagcagaggataagtcctatcagcttcagaag
ctagctgagcagagaaagatggccacgtatctgaatttgctacgcacatgtgagggctat
aatgaagtagcattcccccactgctcatgtgattcacggaggagaggtcatgtgatcgct
gctgtcagcattcaccacttcaaacttcacgcttgcactgaggatggcacgctagagaac
caggttatagctttcgaatggtccgagatgcagaggtgggacacggacgaggagggaatg
gctttctgctttgaatatgtacgaggggagaaaaagcctcgttgggtcaaaatcttcact
ccttattttaactacatgcatgagtgctttgagaggattttctatgagctcaactggagg
aaagaggtggaagaggaggcctcagacaaagacaacaagagttgcaatgagtacctccct
cctttggaacagcagaagggatggcaccacctagggaaagaaatcgccacttcttag
DBGET
integrated database retrieval system
