Pangasianodon hypophthalmus (striped catfish): 113535003
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Entry
113535003 CDS
T05759
Name
(RefSeq) putative nuclease HARBI1 isoform X1
KO
K23222
nuclease HARBI1 [EC:3.1.-.-]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phyp03036
]
113535003
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Gene silencing
Transposable elements
113535003
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DDE_Tnp_4
Plant_tran
DDE_Tnp_1
Motif
Other DBs
NCBI-GeneID:
113535003
NCBI-ProteinID:
XP_026783851
LinkDB
All DBs
Position
Unknown
AA seq
375 aa
AA seq
DB search
MWMKAVTAPLPSDGRLNRVMEYIYFLRRRRYKERVYRRWSSFLGLTDEECQEKLHLSSGV
VLEICRLVADDVANPSGPSALPVAVKVTAALAFFANGSFQNTLGLVTGVSQSAVSCAIHV
VSSSLVRHAADYIVFPTSPESQFRTKQDFMSKYGLPGVLGAIDCTHVQMRAPSTEPLSYV
NRLGVYSINIQVVCDANCLMTHVYANFPGSSHDSFILANSVIPTVFQRGSLDGWLIGDDG
YPLKPWLLTPYVTPTTRKQHVFNSVLSRTRSVIEQTFGMLKMRFRCLDRSGGTLQYSPKN
VSAFFVACCVLHNIATRHGCHFDLTEEALQELRRREAELHEPYEETGEQLTEAWEGRDNL
AAQLVLQLNETPQED
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgtggatgaaggcggtcactgctccgttaccaagcgacgggagattaaatagagtaatg
gagtacatctattttctacgaaggcggagatacaaggagcgtgtatatcgccgctggagc
tcctttcttggcttgactgacgaggaatgccaggaaaaattgcacctctccagtggtgtg
gttttagagatatgccggctagtcgcagatgatgtggccaatccgtcaggccccagtgct
ctacctgtggctgtgaaagtcacagcagctcttgccttctttgctaatggttcattccag
aacaccttgggcttggtgacgggtgtaagccagtcagctgtcagttgtgctatacatgtt
gtttcttccagtttagtccgtcatgctgcggattatatagttttccctacctcacccgag
agccagttcagaactaagcaagatttcatgtctaaatatggattacctggggttttaggt
gcaatagactgcacacacgtgcagatgcgtgcaccctctactgaacctctcagttatgtt
aatcgattgggagtctactccattaacatccaggtcgtgtgtgatgcaaactgcttgatg
acacatgtttatgccaattttccaggatcttcacatgactcctttatcctggccaattct
gttattcctacagtgtttcagaggggcagcctggatgggtggttgataggcgatgacggc
tatcctttgaagccgtggctgcttacaccatacgttacaccaactacaagaaagcagcat
gttttcaacagtgttttgagcaggaccaggtcagtgattgagcaaacttttggaatgtta
aaaatgcgtttcaggtgtttggaccgctcaggtggtacgttacagtacagccccaagaat
gtcagtgcgttctttgtggcatgctgtgtacttcacaacattgccacacgccatggatgt
cattttgacctcactgaggaggcgttacaggaattaagaagaagagaagcagagcttcat
gagccgtatgaggagactggagagcagctaactgaagcatgggagggacgggacaaccta
gctgcacagctggttctacaattaaatgagacaccacaagaggattaa
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