Pangasianodon hypophthalmus (striped catfish): 113535054
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Entry
113535054 CDS
T05759
Name
(RefSeq) nuclear receptor ROR-beta-like isoform X1
KO
K08533
RAR-related orphan receptor beta
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113535054
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
phyp03310
]
113535054
Transcription factors [BR:
phyp03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
113535054
Nuclear receptors [BR:
phyp03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
113535054
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
113535054
NCBI-ProteinID:
XP_026783947
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCVIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQGQECVSSVMSSGGVGEES
GENSHDGHTRTCSRSSSTALSDLDDLGGLLFDLPLTPEDEYCGLELQGNNRTSGEGSSGG
SNSSSHSSMELKHECQLLHTHSPLNEGFSLLETERIAQSVVKSHVETSQYSTEELKQLAW
NLYTAEETRTYQNKPMEVMWQQCVVHLTNAIQYVVEFAKRISGFMELCQNDQIILLKAGC
LSVLLIQMCRAYNPANHTLLFDGKFASVQLFKALGCDDLVNAVFELAKSMSRLQLTEEEM
ALFSAAVLFSPDRTWLTDRQQVQRLQGKVYQALQRCLNREGANEHKLDKMLAKLPAIKSI
CSLHIDKLEFFRLLHPETAYSFPPLYREVFGSESFFPDSTKG
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcaaatcgaggtgatcccctgtaagatctgtggggacaaatcatcagggatc
cattatggagtgatcacatgtgaaggatgtaagggttttttccggcgcagtcagcagaat
aacgccatgtactcgtgttctcggcagaggaactgtgtgatcgaccggacgaacaggaac
cggtgtcagcactgccggctgcagaaatgcctggcgctcggcatgagccgcgacgcggtg
aaatttggccgcatgtctaaaaagcagcgggacagcctgtacgccgaggtgcagaaacat
cagcagggtcaggagtgcgtcagcagcgtcatgtcctccggcggagtgggggaggaatcc
ggagagaacagccacgatggacacactcgaacctgcagccgcagctccagcacagccctc
agcgacctcgacgacctcggaggcctgctgtttgacctgcccctgaccccggaggatgag
tactgcggcctggagctgcagggcaacaacaggacgagcggagaagggagcagcggaggg
agcaactcatcctcacacagctccatggagttaaaacacgaatgccagcttcttcatacg
cactcgccgctcaacgaggggttctcgctgctcgagacagaacgcatcgctcagagtgtg
gtgaagtcacatgtagagacgagtcagtacagcacagaggaactgaaacagcttgcgtgg
aacctgtacacagccgaggagactcgcacttaccagaacaaaccgatggaggtgatgtgg
cagcagtgtgtggtgcacctcactaacgccatccagtacgtggtggagttcgccaagcgc
atctccggcttcatggagctgtgtcagaacgaccagatcatcctgctcaaagcaggatgt
ctgagcgtgttgctgattcagatgtgtcgagcctacaaccccgcgaaccacacgctgctc
ttcgacgggaagttcgcgagcgttcagctcttcaaagctctcggttgtgatgacctggtg
aacgctgtgtttgaactcgctaaatcgatgagccgcctgcagctcacggaagaagaaatg
gctctgttcagcgccgccgtccttttctccccagatcggacctggcttacagacagacag
caggttcagaggctgcaggggaaagtttatcaggcgctgcagcgctgcctgaacagagag
ggcgccaacgagcacaaactcgacaagatgctggctaagcttcctgcgataaagtccatc
tgcagcctccacatcgacaagctggagtttttccgcctgctccacccggaaacagcctac
agcttcccgccgctgtatcgggaggtgttcggtagcgagagcttcttccctgactccacc
aagggctag
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