Pangasianodon hypophthalmus (striped catfish): 113535163
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Entry
113535163 CDS
T05759
Symbol
hdgfl2
Name
(RefSeq) hepatoma-derived growth factor-related protein 2
KO
K25065
hepatoma-derived growth factor-related protein 2
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phyp03400
]
113535163 (hdgfl2)
DNA repair and recombination proteins [BR:
phyp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
113535163 (hdgfl2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LEDGF
PWWP
Med26
Motif
Other DBs
NCBI-GeneID:
113535163
NCBI-ProteinID:
XP_026784161
LinkDB
All DBs
Position
Unknown
AA seq
652 aa
AA seq
DB search
MPHNFRPGDLVFAKMKGYPHWPARIEDVAEGAVKPPPNKIPIFFFGTHETAFLAPKDLFA
YEKYQDRYGKPNKRKGFNEGLWEIQNNPHASYTAPAPASSSESEDNEAAAGSDAQDDEEV
VVPRKAESGSEESDSGSEDQGRGAVKRKAPAPKRPPAKRGRASSSERDEEESGSPSEPEP
SPSSESDSGKNSDQDFTPQKESGGRGGRKPAGRGRRKKASSDSDSDSGSRSDHKQDRSDS
EDVKPRPAVSGSESQSGSKSESESDPPPRKAPQARKKEKPPQKPRARKPKPAPERAPSSS
SNSDSDSESDQISDWKKRDEQRRRELEERRKKEEAEELRRLREREKEEDEKKKKEKESKG
RKDDESSSSSSSDEGVDDHPLKKSKKPPPPPIPAPSDSDSPPPTEAKKLAKRQDSQKGRQ
KKEKGQKEKRERKEKKVQRSEEKHRTRSKPEKPKRRSERPPEKRVEKKKEPSPEEKLQKL
HTDIKFALKVDNPDIEKCLQALEELSAVPVTSQILQKNSDVITTLKKIRRYKASSAVMEK
ATEVYNKLKLQFVGKLETNKPKPQEKGEEENKTEPPCTDSKPVNGESEAEKKDVVSESES
KDPQSAEQDEQSDHKSQNNERPGADSPVEQQSQMAEETDRTSTADTEPPLQS
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgccacacaatttccgacccggggatctggtcttcgccaaaatgaagggctacccgcac
tggccggctcggattgaagatgtggctgaaggagctgtgaaaccgccacctaataaaatc
cccatatttttctttgggactcatgagacagccttccttgcaccgaaagacctgttcgct
tatgagaagtaccaggaccggtatgggaagccaaacaaaaggaaaggatttaatgaagga
ttgtgggaaatacaaaacaatccacatgcgtcttacactgccccggctcctgccagctca
tctgagagtgaggacaacgaagctgcagcaggaagtgatgcgcaagatgatgaagaggtg
gtggtaccgaggaaagccgaatcaggaagtgaggaatctgactctggaagtgaagatcaa
ggcagaggagcagtgaaacggaaagctccagcacctaagaggccgccggcaaagagaggg
cgagcatcatccagcgagcgagatgaagaggagagtggctctccctcagagccagaacct
tcccccagctctgaatcagactctggcaaaaacagcgaccaggacttcactccacagaag
gagtcgggtggccggggaggcaggaagcctgcaggcagaggcaggaggaagaaagcgtcc
tcagattctgattcagactcaggctctcggtcggaccataagcaggacaggagtgattct
gaggatgtgaagccacggccagccgtctctggatccgaatctcagtctggatcaaagtca
gagtctgaatcagatcctccacccaggaaagctccacaggcacgcaagaaagagaaacca
ccacagaagccacgtgcaaggaagcctaaaccagcaccagaaagagctccttcctcttct
tcaaacagtgacagtgacagcgagtcagaccaaatcagtgactggaagaaacgagacgag
cagcggcggcgggagctggaggagcgcaggaagaaggaggaggcggaggagcttcggcgg
ttgagggagagagagaaggaagaggatgagaaaaagaagaaggaaaaagagagcaaagga
cggaaagacgatgaaagcagtagcagcagcagctcggatgaaggtgtagacgaccaccct
ctcaagaagtccaagaaaccgccgccacctcctatccctgcaccttcagattctgattca
ccaccgcccactgaggcgaaaaagctagctaaacgtcaagatagccagaaaggcagacaa
aagaaagagaaagggcagaaagagaaaagagagaggaaggagaagaaggtgcagcgatct
gaggagaaacacagaacgaggtcaaagcctgagaagccaaaacgacgatctgagcgtcca
cctgagaagagagtagagaagaaaaaagagccatctccagaagagaaactccaaaagctg
cacacagacattaagtttgcactgaaggtggacaaccctgacattgagaaatgtttacag
gccttggaggagctgagcgctgtaccagtcaccagtcagatcctacaaaagaactctgac
gtcatcaccacactcaaaaagattcgacgatacaaggccagcagtgcagtaatggaaaag
gctacggaggtctacaacaagttaaaactccagtttgttggaaagttggagacaaataaa
ccaaaaccacaggagaagggtgaggaggaaaataaaacggagccaccgtgcacagattcc
aaaccagtgaacggagagtcagaagctgagaaaaaggacgttgtttctgaaagtgaatct
aaggatccacagtctgcagagcaggatgagcaaagtgaccacaaatcacagaacaacgag
aggcctggagcagacagcccagttgagcagcaatcacagatggctgaggaaacagatcgc
acttcaacagcagacacagagcctccactacaaagctga
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