Pangasianodon hypophthalmus (striped catfish): 113535184
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Entry
113535184 CDS
T05759
Name
(RefSeq) intermediate filament family orphan 1-like isoform X1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Cortex-I_coil
UBA_E1_SCCH
Motif
Other DBs
NCBI-GeneID:
113535184
NCBI-ProteinID:
XP_026784191
LinkDB
All DBs
Position
Unknown
AA seq
653 aa
AA seq
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MPDFEHFRFSCSRMNPSLGASAYAVQQPQNPGTRFSDPEPGYASPDPGFCLGDTGQDSLD
SGSLSNSFQYLHPSGSLHRASLLPPLPFLPLPPPAAPPGAAALRNDLGSNISVLKTLNLR
FRCFLAKVHELERRNKALEIQLQQALEANNNDRGCGQGKRNATVHSGPDFIASSNANDSA
CLTRTLLGPTLNGTGLMPRNKILVGNLDSVSVMDSNSNLSPPFPLNPVSPVDPKSISSIR
ESYDGNGTERFTNSTPQVLPTSIWFHNPAGRFNNSWELRVSGPRVSWPYQDGVGVQIDTI
TPEIRALNNVLAKVKLERDEYKQRWEEEYAVRVDLQEKIAELEEDLYMSEMCQDKLALRV
KQLKAELIVFKGLMSNNLSELDSKIQEKAMKVDMDICRRIDITARLCDVAQQRNCEDMSQ
IFQQVATPPSTLTRCHCKQTSQTNKSNNSEDSVSISESEESKNKETELCGSMTNPVNEEM
QRMLNQLHDCEFEDDCDSLAWEETEETLLLWGDFPACTLAMDTNGEQDESIEKVIKDTES
MFKSREKEYQETIDQIELELATAKSDMNRHLHEYMEMCSMKRGLDVQMETCRRLISQSGD
RKSSLPISVTLEDAEEGEKERKKASLLSDAASTESCCDNLNNPSVAHLLWRKS
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgccagatttcgagcacttccgattttcctgctctagaatgaatcccagtttaggcgcg
agcgcgtacgcggtccagcagccgcagaatcccgggacgcgtttctcagacccggagccc
ggctacgcatcacccgatccgggtttctgcttgggagatactggacaagatagtctggat
tcgggctctctgtccaacagctttcagtatttacatccgagcggctctctgcaccgcgca
tcccttcttcctcctcttccttttcttcctcttcctcctcctgcagctcctcctggtgcg
gcggctctgcgcaacgatctaggctccaacatcagcgtcctaaagactctgaacctgcga
ttccgctgcttcttggccaaagtgcatgagctagagcgccggaacaaagcgctggaaatt
cagcttcagcaggccctggaggctaataataatgacagaggatgtggacaaggtaaaaga
aatgccactgtccactcaggaccagactttatagcaagttcaaatgcaaatgattctgca
tgtttgaccagaactttattaggaccaacacttaatggcaccggactcatgcccagaaac
aagatactggttggaaatttggactcagtaagtgtgatggactcaaattccaatctttcc
ccacctttcccccttaacccagtatctccagttgatcctaagtccatctccagtatcaga
gagagctatgatggcaatgggacagaaaggtttaccaactctacgcctcaggttttaccc
acctcgatttggtttcacaaccctgctgggaggttcaacaatagctgggagttgagggtt
tctggtcccagagtgtcatggccataccaggacggggttggggtccaaatcgacaccatc
acaccagaaatccgggcccttaataatgtactggccaaagtgaagctggagagggatgaa
tacaagcaaaggtgggaggaggagtatgcagtaagagtggacctacaggagaagatcgca
gaactagaagaggacctgtacatgagcgagatgtgtcaggataagcttgctctccgagta
aagcagctaaaggctgagctcattgtcttcaagggcctcatgagcaacaacctctcagag
ttggacagtaagatccaggagaaggccatgaaggtggacatggacatttgccgacggatt
gatatcactgcacgcctgtgcgatgtagcccagcaacggaactgtgaggacatgagtcag
atcttccagcaggtggctacacctccctcaacactgacccgctgtcattgcaaacagacc
tcacagaccaataagtccaacaatagtgaagactcagtcagcatttctgagagtgaggag
agcaagaacaaagagacggagctgtgtggctcaatgaccaatccggttaatgaagaaatg
cagaggatgctcaaccaactgcatgactgtgagtttgaggatgactgtgatagtctggca
tgggaagaaacagaagaaactttactgctttggggagatttcccagcatgcaccttggct
atggacactaatggggagcaggacgagtccatagagaaggtgataaaggacacagagtct
atgttcaagtctcgtgagaaggaatatcaagagaccatagaccagattgagctggagttg
gccacagcaaaatcagatatgaacagacacctgcatgagtacatggagatgtgcagtatg
aagaggggcctggatgtgcagatggagacatgtaggaggctcatttcacagagcggggac
agaaaatcttcccttccaatttctgtgactttggaggatgcagaagaaggagagaaggag
agaaagaaggcaagtcttctctcagacgctgccagcactgagtcatgctgcgacaatcta
aacaacccttctgttgctcacctactttggaggaagtcctga
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